RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 VPS35Q96QK1 796 aa12.26□□□□□ -0.45
SRRT-216ENST00000618262 PPP1R14DQ9NXH3 145 aa12.26□□□□□ -0.45
SRRT-216ENST00000618262 ZNF624Q9P2J8 865 aaPredicted RBP12.26□□□□□ -0.45
SRRT-216ENST00000618262 RPH3AQ9Y2J0 694 aaPredicted RBP12.26□□□□□ -0.45
SRRT-216ENST00000618262 PCDHA13Q9Y5I0 950 aa12.26□□□□□ -0.45
SRRT-216ENST00000618262 PRRG1O14668 218 aa12.25□□□□□ -0.45
SRRT-216ENST00000618262 SEC24AO95486 1093 aa12.25□□□□□ -0.45
SRRT-216ENST00000618262 ATP5BP06576 529 aaKnown RBP12.25□□□□□ -0.45
SRRT-216ENST00000618262 PCSK1P29120 753 aa12.25□□□□□ -0.45
SRRT-216ENST00000618262 CLK3P49761 638 aaKnown RBP12.25□□□□□ -0.45
SRRT-216ENST00000618262 GALCP54803 685 aa12.25□□□□□ -0.45
SRRT-216ENST00000618262 SQLEQ14534 574 aa12.25□□□□□ -0.45
SRRT-216ENST00000618262 KCTD21Q4G0X4 260 aa12.25□□□□□ -0.45
SRRT-216ENST00000618262 PTPN20Q4JDL3 420 aa12.25□□□□□ -0.45
SRRT-216ENST00000618262 SHQ1Q6PI26 577 aaKnown RBP12.25□□□□□ -0.45
SRRT-216ENST00000618262 ITIH5Q86UX2 942 aa12.25□□□□□ -0.45
SRRT-216ENST00000618262 FAM35AQ86V20 835 aa12.25□□□□□ -0.45
SRRT-216ENST00000618262 PIGZQ86VD9 579 aa12.25□□□□□ -0.45
SRRT-216ENST00000618262 LZTR1Q8N653 840 aa12.25□□□□□ -0.45
SRRT-216ENST00000618262 PDZD8Q8NEN9 1154 aa12.25□□□□□ -0.45
SRRT-216ENST00000618262 CFAP61Q8NHU2 1237 aa12.25□□□□□ -0.45
SRRT-216ENST00000618262 ADAM32Q8TC27 787 aa12.25□□□□□ -0.45
SRRT-216ENST00000618262 PHOSPHO2Q8TCD6 241 aa12.25□□□□□ -0.45
SRRT-216ENST00000618262 TGS1Q96RS0 853 aaKnown RBP12.25□□□□□ -0.45
SRRT-216ENST00000618262 TMEM175Q9BSA9 504 aa12.25□□□□□ -0.45
SRRT-216ENST00000618262 RAD21L1Q9H4I0 556 aa12.25□□□□□ -0.45
SRRT-216ENST00000618262 ANAPC5Q9UJX4 755 aa12.25□□□□□ -0.45
SRRT-216ENST00000618262 VWA8A3KMH1 1905 aa12.25□□□□□ -0.45
SRRT-216ENST00000618262 USP17L7P0C7H9 530 aa12.25□□□□□ -0.45
SRRT-216ENST00000618262 TPBGLP0DKB5 382 aa12.25□□□□□ -0.45
SRRT-216ENST00000618262 GJA1P17302 382 aa12.25□□□□□ -0.45
SRRT-216ENST00000618262 ASMTP46597 345 aa12.25□□□□□ -0.45
SRRT-216ENST00000618262 YWHAEP62258 255 aaKnown RBP12.25□□□□□ -0.45
SRRT-216ENST00000618262 PFKPQ01813 784 aa12.25□□□□□ -0.45
SRRT-216ENST00000618262 ADIGQ0VDE8 80 aa12.25□□□□□ -0.45
SRRT-216ENST00000618262 ITGA9Q13797 1035 aa12.25□□□□□ -0.45
SRRT-216ENST00000618262 ITIH4Q14624 930 aa12.25□□□□□ -0.45
SRRT-216ENST00000618262 SLC18A3Q16572 532 aa12.25□□□□□ -0.45
SRRT-216ENST00000618262 ZC3H18Q86VM9 953 aaKnown RBP12.25□□□□□ -0.45
SRRT-216ENST00000618262 SLC22A17Q8WUG5 538 aa12.25□□□□□ -0.45
SRRT-216ENST00000618262 CLP1Q92989 425 aaKnown RBP12.25□□□□□ -0.45
SRRT-216ENST00000618262 NMD3Q96D46 503 aaKnown RBP12.25□□□□□ -0.45
SRRT-216ENST00000618262 SMOQ99835 787 aa12.25□□□□□ -0.45
SRRT-216ENST00000618262 TEKT2Q9UIF3 430 aa12.25□□□□□ -0.45
SRRT-216ENST00000618262 GRID1Q9ULK0 1009 aa12.25□□□□□ -0.45
SRRT-216ENST00000618262 PACSIN2Q9UNF0 486 aaPredicted RBP12.25□□□□□ -0.45
SRRT-216ENST00000618262 GPSM3Q9Y4H4 160 aa12.25□□□□□ -0.45
SRRT-216ENST00000618262 ADGRG1Q9Y653 693 aa12.25□□□□□ -0.45
SRRT-216ENST00000618262 PDCD11Q14690 1871 aaKnown RBP12.25□□□□□ -0.45
SRRT-216ENST00000618262 SH3PXD2BA1X283 911 aa12.24□□□□□ -0.45
SRRT-216ENST00000618262 GABBR2O75899 941 aa12.24□□□□□ -0.45
SRRT-216ENST00000618262 ERBB2P04626 1255 aa12.24□□□□□ -0.45
SRRT-216ENST00000618262 MYZAPP0CAP1 466 aa12.24□□□□□ -0.45
SRRT-216ENST00000618262 CYLC1P35663 651 aaPredicted RBP12.24□□□□□ -0.45
SRRT-216ENST00000618262 GJC1P36383 396 aa12.24□□□□□ -0.45
SRRT-216ENST00000618262 SLC1A1P43005 524 aa12.24□□□□□ -0.45
SRRT-216ENST00000618262 PPM1FP49593 454 aaPredicted RBP12.24□□□□□ -0.45
SRRT-216ENST00000618262 ENPEPQ07075 957 aa12.24□□□□□ -0.45
SRRT-216ENST00000618262 CDO1Q16878 200 aa12.24□□□□□ -0.45
SRRT-216ENST00000618262 RAB6CQ53S08 254 aa12.24□□□□□ -0.45
SRRT-216ENST00000618262 OR6B2Q6IFH4 312 aa12.24□□□□□ -0.45
SRRT-216ENST00000618262 CLEC20AQ6ZU45 233 aa12.24□□□□□ -0.45
SRRT-216ENST00000618262 HSPH1Q92598 858 aa12.24□□□□□ -0.45
SRRT-216ENST00000618262 EDEM1Q92611 657 aa12.24□□□□□ -0.45
SRRT-216ENST00000618262 ATP6V1G3Q96LB4 118 aa12.24□□□□□ -0.45
SRRT-216ENST00000618262 RAB6CQ9H0N0 254 aa12.24□□□□□ -0.45
SRRT-216ENST00000618262 TLR9Q9NR96 1032 aa12.24□□□□□ -0.45
SRRT-216ENST00000618262 KLHL3Q9UH77 587 aa12.24□□□□□ -0.45
SRRT-216ENST00000618262 PCDHGA2Q9Y5H1 932 aa12.24□□□□□ -0.45
SRRT-216ENST00000618262 PCDHGA11Q9Y5H2 935 aa12.24□□□□□ -0.45
SRRT-216ENST00000618262 SNX8Q9Y5X2 465 aa12.24□□□□□ -0.45
SRRT-216ENST00000618262 RALGAPA2Q2PPJ7 1873 aa12.24□□□□□ -0.45
SRRT-216ENST00000618262 SMIM31A0A1B0GVY4 71 aa12.24□□□□□ -0.45
SRRT-216ENST00000618262 FUOMA2VDF0 154 aa12.24□□□□□ -0.45
SRRT-216ENST00000618262 ZBTB14O43829 449 aa12.24□□□□□ -0.45
SRRT-216ENST00000618262 ADSLP30566 484 aaPredicted RBP12.24□□□□□ -0.45
SRRT-216ENST00000618262 VBP1P61758 197 aa12.24□□□□□ -0.45
SRRT-216ENST00000618262 RPL7AP62424 266 aaKnown RBP12.24□□□□□ -0.45
SRRT-216ENST00000618262 ASTE1Q2TB18 679 aaPredicted RBP12.24□□□□□ -0.45
SRRT-216ENST00000618262 ST13P4Q8IZP2 240 aaPredicted RBP12.24□□□□□ -0.45
SRRT-216ENST00000618262 TMEM86AQ8N2M4 240 aa12.24□□□□□ -0.45
SRRT-216ENST00000618262 ZMIZ2Q8NF64 920 aa12.24□□□□□ -0.45
SRRT-216ENST00000618262 PTCD2Q8WV60 388 aaKnown RBP12.24□□□□□ -0.45
SRRT-216ENST00000618262 HDAC11Q96DB2 347 aa12.24□□□□□ -0.45
SRRT-216ENST00000618262 ARL5BQ96KC2 179 aa12.24□□□□□ -0.45
SRRT-216ENST00000618262 COX4I2Q96KJ9 171 aa12.24□□□□□ -0.45
SRRT-216ENST00000618262 ACBD6Q9BR61 282 aa12.24□□□□□ -0.45
SRRT-216ENST00000618262 ECT2Q9H8V3 914 aa12.24□□□□□ -0.45
SRRT-216ENST00000618262 CUEDC1Q9NWM3 386 aaPredicted RBP12.24□□□□□ -0.45
SRRT-216ENST00000618262 SLC39A1Q9NY26 324 aa12.24□□□□□ -0.45
SRRT-216ENST00000618262 CDH9Q9ULB4 789 aa12.24□□□□□ -0.45
SRRT-216ENST00000618262 DOLKQ9UPQ8 538 aa12.24□□□□□ -0.45
SRRT-216ENST00000618262 PFDN6O15212 129 aa12.24□□□□□ -0.45
SRRT-216ENST00000618262 OAZ2O95190 189 aa12.24□□□□□ -0.45
SRRT-216ENST00000618262 MOCS3O95396 460 aa12.24□□□□□ -0.45
SRRT-216ENST00000618262 VNN2O95498 520 aa12.24□□□□□ -0.45
SRRT-216ENST00000618262 STAU1O95793 577 aaKnown RBP12.24□□□□□ -0.45
SRRT-216ENST00000618262 SNRPAP09012 282 aaKnown RBP12.24□□□□□ -0.45
SRRT-216ENST00000618262 EPCAMP16422 314 aa12.24□□□□□ -0.45
SRRT-216ENST00000618262 SLC26A3P40879 764 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms