RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 PDGFRLQ15198 375 aa16.53■□□□□ 0.24
SNAP47-213ENST00000617596 GEN1Q17RS7 908 aa16.53■□□□□ 0.24
SNAP47-213ENST00000617596 AAK1Q2M2I8 961 aa16.53■□□□□ 0.24
SNAP47-213ENST00000617596 PARP6Q2NL67 630 aa16.53■□□□□ 0.24
SNAP47-213ENST00000617596 LACTB2Q53H82 288 aaPredicted RBP16.53■□□□□ 0.24
SNAP47-213ENST00000617596 TMEM215Q68D42 235 aa16.53■□□□□ 0.24
SNAP47-213ENST00000617596 CCDC25Q86WR0 208 aa16.53■□□□□ 0.24
SNAP47-213ENST00000617596 PPIL6Q8IXY8 311 aa16.53■□□□□ 0.24
SNAP47-213ENST00000617596 DCAF4L2Q8NA75 395 aa16.53■□□□□ 0.24
SNAP47-213ENST00000617596 SORCS1Q8WY21 1168 aa16.53■□□□□ 0.24
SNAP47-213ENST00000617596 FMO2Q99518 471 aa16.53■□□□□ 0.24
SNAP47-213ENST00000617596 VAT1Q99536 393 aa16.53■□□□□ 0.24
SNAP47-213ENST00000617596 LIMD1Q9UGP4 676 aa16.53■□□□□ 0.24
SNAP47-213ENST00000617596 TRHDEQ9UKU6 1024 aa16.53■□□□□ 0.24
SNAP47-213ENST00000617596 FCF1Q9Y324 198 aaKnown RBP16.53■□□□□ 0.24
SNAP47-213ENST00000617596 CHD5Q8TDI0 1954 aa16.52■□□□□ 0.24
SNAP47-213ENST00000617596 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.52■□□□□ 0.23
SNAP47-213ENST00000617596 HOXC11O43248 304 aaPredicted RBP16.52■□□□□ 0.23
SNAP47-213ENST00000617596 SMAD6O43541 496 aaKnown RBP16.52■□□□□ 0.23
SNAP47-213ENST00000617596 CACNG3O60359 315 aa16.52■□□□□ 0.23
SNAP47-213ENST00000617596 BANF1O75531 89 aa16.52■□□□□ 0.23
SNAP47-213ENST00000617596 MDH1P40925 334 aaKnown RBP16.52■□□□□ 0.23
SNAP47-213ENST00000617596 RGRP47804 291 aa16.52■□□□□ 0.23
SNAP47-213ENST00000617596 DSC2Q02487 901 aa16.52■□□□□ 0.23
SNAP47-213ENST00000617596 IHHQ14623 411 aa16.52■□□□□ 0.23
SNAP47-213ENST00000617596 CYTH1Q15438 398 aa16.52■□□□□ 0.23
SNAP47-213ENST00000617596 HP1BP3Q5SSJ5 553 aaPredicted RBP16.52■□□□□ 0.23
SNAP47-213ENST00000617596 KDELC2Q7Z4H8 507 aa16.52■□□□□ 0.23
SNAP47-213ENST00000617596 ADIPOR2Q86V24 386 aa16.52■□□□□ 0.23
SNAP47-213ENST00000617596 SFTPA1Q8IWL2 248 aa16.52■□□□□ 0.23
SNAP47-213ENST00000617596 TEX26Q8N6G2 289 aa16.52■□□□□ 0.23
SNAP47-213ENST00000617596 N4BP2L2Q92802 583 aaPredicted RBP16.52■□□□□ 0.23
SNAP47-213ENST00000617596 OXNAD1Q96HP4 312 aaPredicted RBP16.52■□□□□ 0.23
SNAP47-213ENST00000617596 SGSM3Q96HU1 749 aa16.52■□□□□ 0.23
SNAP47-213ENST00000617596 RBM15Q96T37 977 aaKnown RBP eCLIP16.52■□□□□ 0.23
SNAP47-213ENST00000617596 MLPHQ9BV36 600 aaPredicted RBP16.52■□□□□ 0.23
SNAP47-213ENST00000617596 C2orf49Q9BVC5 232 aaPredicted RBP16.52■□□□□ 0.23
SNAP47-213ENST00000617596 GLOD4Q9HC38 313 aa16.52■□□□□ 0.23
SNAP47-213ENST00000617596 SLC40A1Q9NP59 571 aa16.52■□□□□ 0.23
SNAP47-213ENST00000617596 BATF3Q9NR55 127 aa16.52■□□□□ 0.23
SNAP47-213ENST00000617596 IGSF9Q9P2J2 1179 aa16.52■□□□□ 0.23
SNAP47-213ENST00000617596 ANHXE9PGG2 379 aa16.51■□□□□ 0.23
SNAP47-213ENST00000617596 USP12O75317 370 aa16.51■□□□□ 0.23
SNAP47-213ENST00000617596 AVILO75366 819 aa16.51■□□□□ 0.23
SNAP47-213ENST00000617596 SOX9P48436 509 aa16.51■□□□□ 0.23
SNAP47-213ENST00000617596 DGKGP49619 791 aa16.51■□□□□ 0.23
SNAP47-213ENST00000617596 NIPAL4Q0D2K0 466 aa16.51■□□□□ 0.23
SNAP47-213ENST00000617596 SEMA5AQ13591 1074 aa16.51■□□□□ 0.23
SNAP47-213ENST00000617596 ZNF235Q14590 738 aa16.51■□□□□ 0.23
SNAP47-213ENST00000617596 SLMAPQ14BN4 828 aa16.51■□□□□ 0.23
SNAP47-213ENST00000617596 MORF4L2Q15014 288 aa16.51■□□□□ 0.23
SNAP47-213ENST00000617596 LRIG3Q6UXM1 1119 aa16.51■□□□□ 0.23
SNAP47-213ENST00000617596 MTSS1LQ765P7 747 aa16.51■□□□□ 0.23
SNAP47-213ENST00000617596 ETFBKMTQ8IXQ9 262 aa16.51■□□□□ 0.23
SNAP47-213ENST00000617596 KIAA1958Q8N8K9 716 aa16.51■□□□□ 0.23
SNAP47-213ENST00000617596 ARL8AQ96BM9 186 aa16.51■□□□□ 0.23
SNAP47-213ENST00000617596 CHFRQ96EP1 664 aa16.51■□□□□ 0.23
SNAP47-213ENST00000617596 VCANP13611 3396 aa16.51■□□□□ 0.23
SNAP47-213ENST00000617596 ANTXRLA6NF34 631 aa16.51■□□□□ 0.23
SNAP47-213ENST00000617596 CHADO15335 359 aa16.51■□□□□ 0.23
SNAP47-213ENST00000617596 TMCC1O94876 653 aa16.51■□□□□ 0.23
SNAP47-213ENST00000617596 ASGR2P07307 311 aa16.51■□□□□ 0.23
SNAP47-213ENST00000617596 CISD3P0C7P0 127 aa16.51■□□□□ 0.23
SNAP47-213ENST00000617596 NR1D1P20393 614 aa16.51■□□□□ 0.23
SNAP47-213ENST00000617596 KDSRQ06136 332 aa16.51■□□□□ 0.23
SNAP47-213ENST00000617596 CFAP58Q5T655 872 aa16.51■□□□□ 0.23
SNAP47-213ENST00000617596 ITPRIPL1Q6GPH6 555 aa16.51■□□□□ 0.23
SNAP47-213ENST00000617596 PARP9Q8IXQ6 854 aa16.51■□□□□ 0.23
SNAP47-213ENST00000617596 BBOF1Q8ND07 529 aa16.51■□□□□ 0.23
SNAP47-213ENST00000617596 CYB5D2Q8WUJ1 264 aa16.51■□□□□ 0.23
SNAP47-213ENST00000617596 FATE1Q969F0 183 aa16.51■□□□□ 0.23
SNAP47-213ENST00000617596 ZIM3Q96PE6 472 aa16.51■□□□□ 0.23
SNAP47-213ENST00000617596 XPO6Q96QU8 1125 aaKnown RBP16.51■□□□□ 0.23
SNAP47-213ENST00000617596 CCT8L2Q96SF2 557 aa16.51■□□□□ 0.23
SNAP47-213ENST00000617596 APOL2Q9BQE5 337 aa16.51■□□□□ 0.23
SNAP47-213ENST00000617596 CINPQ9BW66 212 aaPredicted RBP16.51■□□□□ 0.23
SNAP47-213ENST00000617596 BRD9Q9H8M2 597 aa16.51■□□□□ 0.23
SNAP47-213ENST00000617596 FBXO10Q9UK96 956 aa16.51■□□□□ 0.23
SNAP47-213ENST00000617596 ATP8A1Q9Y2Q0 1164 aa16.51■□□□□ 0.23
SNAP47-213ENST00000617596 ARNTLO00327 626 aa16.5■□□□□ 0.23
SNAP47-213ENST00000617596 GJA4P35212 333 aa16.5■□□□□ 0.23
SNAP47-213ENST00000617596 FDFT1P37268 417 aa16.5■□□□□ 0.23
SNAP47-213ENST00000617596 ZKSCAN8Q15776 578 aaPredicted RBP16.5■□□□□ 0.23
SNAP47-213ENST00000617596 FNBP1LQ5T0N5 605 aa16.5■□□□□ 0.23
SNAP47-213ENST00000617596 UBAP2Q5T6F2 1119 aaKnown RBP16.5■□□□□ 0.23
SNAP47-213ENST00000617596 TLDC1Q6P9B6 456 aa16.5■□□□□ 0.23
SNAP47-213ENST00000617596 PCGF5Q86SE9 256 aa16.5■□□□□ 0.23
SNAP47-213ENST00000617596 CPA6Q8N4T0 437 aa16.5■□□□□ 0.23
SNAP47-213ENST00000617596 ATP6V1G3Q96LB4 118 aa16.5■□□□□ 0.23
SNAP47-213ENST00000617596 NSMCE3Q96MG7 304 aa16.5■□□□□ 0.23
SNAP47-213ENST00000617596 ZNF599Q96NL3 588 aa16.5■□□□□ 0.23
SNAP47-213ENST00000617596 TM6SF2Q9BZW4 377 aa16.5■□□□□ 0.23
SNAP47-213ENST00000617596 CIPCQ9C0C6 399 aa16.5■□□□□ 0.23
SNAP47-213ENST00000617596 KCNK12Q9HB15 430 aa16.5■□□□□ 0.23
SNAP47-213ENST00000617596 CD248Q9HCU0 757 aa16.5■□□□□ 0.23
SNAP47-213ENST00000617596 PMPCBO75439 489 aa16.49■□□□□ 0.23
SNAP47-213ENST00000617596 IL9P15248 144 aa16.49■□□□□ 0.23
SNAP47-213ENST00000617596 CD86P42081 329 aa16.49■□□□□ 0.23
SNAP47-213ENST00000617596 PLK1P53350 603 aa16.49■□□□□ 0.23
SNAP47-213ENST00000617596 MSS51Q4VC12 460 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms