RNA–Protein interactions for RNA: ENST00000617428.2

AC008878.3-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC008878.3, Length 4,964 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008878.3-201ENST00000617428 ARL2P36404 184 aa18.71■□□□□ 0.59
AC008878.3-201ENST00000617428 RPL14P50914 215 aaKnown RBP18.71■□□□□ 0.59
AC008878.3-201ENST00000617428 TCHHL1Q5QJ38 904 aaPredicted RBP18.71■□□□□ 0.59
AC008878.3-201ENST00000617428 ATL1Q8WXF7 558 aa18.71■□□□□ 0.59
AC008878.3-201ENST00000617428 PWWP2AQ96N64 755 aa18.71■□□□□ 0.59
AC008878.3-201ENST00000617428 LHX5Q9H2C1 402 aa18.71■□□□□ 0.59
AC008878.3-201ENST00000617428 DEC1Q9P2X7 70 aa18.71■□□□□ 0.59
AC008878.3-201ENST00000617428 ROBO3Q96MS0 1386 aa18.7■□□□□ 0.58
AC008878.3-201ENST00000617428 CILPO75339 1184 aa18.7■□□□□ 0.58
AC008878.3-201ENST00000617428 INHAP05111 366 aa18.7■□□□□ 0.58
AC008878.3-201ENST00000617428 RPA3P35244 121 aaPredicted RBP18.7■□□□□ 0.58
AC008878.3-201ENST00000617428 FLT3P36888 993 aa18.7■□□□□ 0.58
AC008878.3-201ENST00000617428 IRX1P78414 480 aaPredicted RBP18.7■□□□□ 0.58
AC008878.3-201ENST00000617428 PCDHB18PQ96TA0 734 aa18.7■□□□□ 0.58
AC008878.3-201ENST00000617428 TBCDQ9BTW9 1192 aa18.7■□□□□ 0.58
AC008878.3-201ENST00000617428 VPS45Q9NRW7 570 aa18.7■□□□□ 0.58
AC008878.3-201ENST00000617428 LOC102724159A0A0B4J2E5 919 aa18.7■□□□□ 0.58
AC008878.3-201ENST00000617428 MEI4A8MW99 385 aa18.7■□□□□ 0.58
AC008878.3-201ENST00000617428 NFKBIEO00221 500 aa18.7■□□□□ 0.58
AC008878.3-201ENST00000617428 FFAR3O14843 346 aa18.7■□□□□ 0.58
AC008878.3-201ENST00000617428 GPR42O15529 346 aa18.7■□□□□ 0.58
AC008878.3-201ENST00000617428 SMNDC1O75940 238 aaKnown RBP eCLIP18.7■□□□□ 0.58
AC008878.3-201ENST00000617428 SLC25A14O95258 325 aaPredicted RBP18.7■□□□□ 0.58
AC008878.3-201ENST00000617428 COX7A2P14406 83 aa18.7■□□□□ 0.58
AC008878.3-201ENST00000617428 FASP25445 335 aa18.7■□□□□ 0.58
AC008878.3-201ENST00000617428 CCR4P51679 360 aa18.7■□□□□ 0.58
AC008878.3-201ENST00000617428 PWP2Q15269 919 aaKnown RBP18.7■□□□□ 0.58
AC008878.3-201ENST00000617428 COPS8Q99627 209 aa18.7■□□□□ 0.58
AC008878.3-201ENST00000617428 PSME2Q9UL46 239 aa18.7■□□□□ 0.58
AC008878.3-201ENST00000617428 A0A0G2JLL6 359 aaPredicted RBP18.7■□□□□ 0.58
AC008878.3-201ENST00000617428 CYP2R1Q6VVX0 501 aa18.7■□□□□ 0.58
AC008878.3-201ENST00000617428 STRADAQ7RTN6 431 aa18.7■□□□□ 0.58
AC008878.3-201ENST00000617428 PRRT2Q7Z6L0 340 aaPredicted RBP18.7■□□□□ 0.58
AC008878.3-201ENST00000617428 CYP4X1Q8N118 509 aa18.7■□□□□ 0.58
AC008878.3-201ENST00000617428 DBF4BQ8NFT6 615 aa18.7■□□□□ 0.58
AC008878.3-201ENST00000617428 BTN2A3PQ96KV6 586 aa18.7■□□□□ 0.58
AC008878.3-201ENST00000617428 EBNA1BP2Q99848 306 aaKnown RBP18.7■□□□□ 0.58
AC008878.3-201ENST00000617428 KIAA1522Q9P206 1035 aaPredicted RBP18.7■□□□□ 0.58
AC008878.3-201ENST00000617428 GUCY1B2O75343 617 aa18.7■□□□□ 0.58
AC008878.3-201ENST00000617428 FCGR1AP12314 374 aa18.7■□□□□ 0.58
AC008878.3-201ENST00000617428 ABRQ12979 859 aa18.7■□□□□ 0.58
AC008878.3-201ENST00000617428 DHFR2Q86XF0 187 aa18.7■□□□□ 0.58
AC008878.3-201ENST00000617428 ATXN2LQ8WWM7 1075 aaKnown RBP18.7■□□□□ 0.58
AC008878.3-201ENST00000617428 ALG3Q92685 438 aa18.7■□□□□ 0.58
AC008878.3-201ENST00000617428 QRFPRQ96P65 431 aa18.7■□□□□ 0.58
AC008878.3-201ENST00000617428 IGLV3-22A0A075B6J6 115 aa18.69■□□□□ 0.58
AC008878.3-201ENST00000617428 KPNA5O15131 536 aa18.69■□□□□ 0.58
AC008878.3-201ENST00000617428 PAPSS1O43252 624 aaPredicted RBP18.69■□□□□ 0.58
AC008878.3-201ENST00000617428 CA12O43570 354 aa18.69■□□□□ 0.58
AC008878.3-201ENST00000617428 PEX11AO75192 247 aa18.69■□□□□ 0.58
AC008878.3-201ENST00000617428 VPS4BO75351 444 aa18.69■□□□□ 0.58
AC008878.3-201ENST00000617428 SLC25A23Q9BV35 468 aa18.69■□□□□ 0.58
AC008878.3-201ENST00000617428 PRRG3Q9BZD7 231 aa18.69■□□□□ 0.58
AC008878.3-201ENST00000617428 ZFYVE1Q9HBF4 777 aa18.69■□□□□ 0.58
AC008878.3-201ENST00000617428 RBPJLQ9UBG7 517 aa18.69■□□□□ 0.58
AC008878.3-201ENST00000617428 CCL16O15467 120 aa18.69■□□□□ 0.58
AC008878.3-201ENST00000617428 CLDN11O75508 207 aa18.69■□□□□ 0.58
AC008878.3-201ENST00000617428 C1RP00736 705 aa18.69■□□□□ 0.58
AC008878.3-201ENST00000617428 TRMT5Q32P41 509 aaKnown RBP18.69■□□□□ 0.58
AC008878.3-201ENST00000617428 FUT10Q6P4F1 479 aa18.69■□□□□ 0.58
AC008878.3-201ENST00000617428 GET4Q7L5D6 327 aaPredicted RBP18.69■□□□□ 0.58
AC008878.3-201ENST00000617428 OR8D1Q8WZ84 308 aa18.69■□□□□ 0.58
AC008878.3-201ENST00000617428 UPF1Q92900 1129 aaKnown RBP eCLIP18.69■□□□□ 0.586e-7■■■■□ 23.5
AC008878.3-201ENST00000617428 USP7Q93009 1102 aa18.69■□□□□ 0.58
AC008878.3-201ENST00000617428 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.69■□□□□ 0.58
AC008878.3-201ENST00000617428 PCDHA11Q9Y5I1 949 aa18.69■□□□□ 0.58
AC008878.3-201ENST00000617428 TBC1D3DA0A087WVF3 549 aa18.69■□□□□ 0.58
AC008878.3-201ENST00000617428 TBC1D3IA0A087WXS9 549 aa18.69■□□□□ 0.58
AC008878.3-201ENST00000617428 TBC1D3EA0A087X179 549 aa18.69■□□□□ 0.58
AC008878.3-201ENST00000617428 TBC1D3KA0A087X1G2 549 aa18.69■□□□□ 0.58
AC008878.3-201ENST00000617428 TBC1D3FA6NER0 549 aaPredicted RBP18.69■□□□□ 0.58
AC008878.3-201ENST00000617428 TBC1D3LB9A6J9 549 aa18.69■□□□□ 0.58
AC008878.3-201ENST00000617428 FSCN2O14926 492 aa18.69■□□□□ 0.58
AC008878.3-201ENST00000617428 TBC1D3HP0C7X1 549 aa18.69■□□□□ 0.58
AC008878.3-201ENST00000617428 HPCAL1P37235 193 aa18.69■□□□□ 0.58
AC008878.3-201ENST00000617428 SLC5A3P53794 718 aa18.69■□□□□ 0.58
AC008878.3-201ENST00000617428 SLC9A5Q14940 896 aa18.69■□□□□ 0.58
AC008878.3-201ENST00000617428 USP39Q53GS9 565 aaKnown RBP18.69■□□□□ 0.58
AC008878.3-201ENST00000617428 TBC1D3GQ6DHY5 549 aa18.69■□□□□ 0.58
AC008878.3-201ENST00000617428 TBC1D3CQ6IPX1 549 aa18.69■□□□□ 0.58
AC008878.3-201ENST00000617428 FOXR2Q6PJQ5 311 aa18.69■□□□□ 0.58
AC008878.3-201ENST00000617428 TBC1D3Q8IZP1 549 aaPredicted RBP18.69■□□□□ 0.58
AC008878.3-201ENST00000617428 OR52K2Q8NGK3 314 aa18.69■□□□□ 0.58
AC008878.3-201ENST00000617428 PAWRQ96IZ0 340 aaKnown RBP18.69■□□□□ 0.58
AC008878.3-201ENST00000617428 RNF145Q96MT1 663 aa18.69■□□□□ 0.58
AC008878.3-201ENST00000617428 OSBPL10Q9BXB5 764 aa18.69■□□□□ 0.58
AC008878.3-201ENST00000617428 BATF3Q9NR55 127 aa18.69■□□□□ 0.58
AC008878.3-201ENST00000617428 CHKBQ9Y259 395 aa18.69■□□□□ 0.58
AC008878.3-201ENST00000617428 ELFN1P0C7U0 828 aa18.69■□□□□ 0.58
AC008878.3-201ENST00000617428 PABPC1P11940 636 aaKnown RBP18.69■□□□□ 0.58
AC008878.3-201ENST00000617428 HNRNPH3P31942 346 aaKnown RBP18.69■□□□□ 0.58
AC008878.3-201ENST00000617428 GSSP48637 474 aa18.69■□□□□ 0.58
AC008878.3-201ENST00000617428 SPIDRQ14159 915 aa18.69■□□□□ 0.58
AC008878.3-201ENST00000617428 IRF2BP1Q8IU81 584 aa18.69■□□□□ 0.58
AC008878.3-201ENST00000617428 TMEM132CQ8N3T6 1108 aa18.69■□□□□ 0.58
AC008878.3-201ENST00000617428 CDRT15Q96T59 188 aa18.69■□□□□ 0.58
AC008878.3-201ENST00000617428 ZNF214Q9UL59 606 aaPredicted RBP18.69■□□□□ 0.58
AC008878.3-201ENST00000617428 DNTTP04053 509 aa18.68■□□□□ 0.58
AC008878.3-201ENST00000617428 ALADP13716 330 aa18.68■□□□□ 0.58
AC008878.3-201ENST00000617428 LBPP18428 481 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms