RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 ACLYP53396 1101 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 CDK18Q07002 472 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 CCDC15Q0P6D6 951 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 IKBKEQ14164 716 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 ESRP1Q6NXG1 681 aaKnown RBP13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 MARK4Q96L34 752 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 MID1IP1Q9NPA3 183 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 GID8Q9NWU2 228 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 PACSIN3Q9UKS6 424 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 SMCHD1A6NHR9 2005 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 SYCE1LA8MT33 242 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 TPST1O60507 370 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 FKBP6O75344 327 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 USP1O94782 785 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 ACADSP16219 412 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 ATP5F1P24539 256 aaPredicted RBP13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 LIMK2P53671 638 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 GALNT3Q14435 633 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 DLG2Q15700 870 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 GALNTL6Q49A17 601 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 FBXO39Q8N4B4 442 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 RBBP8Q99708 897 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 SLC39A8Q9C0K1 460 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 LRMDAQ9H2I8 198 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 CXorf56Q9H5V9 222 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 AGO3Q9H9G7 860 aaKnown RBP13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 WWOXQ9NZC7 414 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 LMCD1Q9NZU5 365 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 CCDC167Q9P0B6 97 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 SORCS3Q9UPU3 1222 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 MATN3O15232 486 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 HDAC3O15379 428 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 IRAK2O43187 625 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 E2F6O75461 281 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 SERPINA6P08185 405 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 ZNF865P0CJ78 1059 aaPredicted RBP13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 SELPP16109 830 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 ITGALP20701 1170 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 USP41Q3LFD5 358 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 MARCH8Q5T0T0 291 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 C6orf89Q6UWU4 347 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 MARK2Q7KZI7 788 aaKnown RBP13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 LRRC8DQ7L1W4 858 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 FAM13CQ8NE31 585 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 CATSPER1Q8NEC5 780 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 MIPOL1Q8TD10 442 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 SNX19Q92543 992 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 B3GALT6Q96L58 329 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 SIGLEC10Q96LC7 697 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 C7orf26Q96N11 449 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 CDRT15Q96T59 188 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 EIF2B3Q9NR50 452 aaKnown RBP13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 CATSPERZQ9NTU4 200 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 A8MX80 341 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 KCNU1A8MYU2 1149 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 F7P08709 466 aaPredicted RBP13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 HNRNPLP14866 589 aaKnown RBP eCLIP13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 TYMPP19971 482 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 CLCN5P51795 746 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 ST8SIA6P61647 398 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 FOXD4Q12950 439 aaPredicted RBP13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 CAPRIN1Q14444 709 aaKnown RBP13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 INPP5AQ14642 412 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 CYTH1Q15438 398 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 INSCQ1MX18 579 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 TMCO4Q5TGY1 634 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 EFL1Q7Z2Z2 1120 aaKnown RBP13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 CAND1Q86VP6 1230 aaKnown RBP13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 RASAL3Q86YV0 1011 aa13.34□□□□□ -0.27
PPP4R3B-206ENST00000616407 TGDSO95455 350 aa13.33□□□□□ -0.28
PPP4R3B-206ENST00000616407 TBX18O95935 607 aa13.33□□□□□ -0.28
PPP4R3B-206ENST00000616407 MRPS35P82673 323 aaKnown RBP13.33□□□□□ -0.28
PPP4R3B-206ENST00000616407 MPP1Q00013 466 aa13.33□□□□□ -0.28
PPP4R3B-206ENST00000616407 PFKFB4Q16877 469 aa13.33□□□□□ -0.28
PPP4R3B-206ENST00000616407 LIPMQ5VYY2 423 aa13.33□□□□□ -0.28
PPP4R3B-206ENST00000616407 IZUMO2Q6UXV1 221 aa13.33□□□□□ -0.28
PPP4R3B-206ENST00000616407 UBR7Q8N806 425 aa13.33□□□□□ -0.28
PPP4R3B-206ENST00000616407 OR52K2Q8NGK3 314 aa13.33□□□□□ -0.28
PPP4R3B-206ENST00000616407 KBTBD7Q8WVZ9 684 aa13.33□□□□□ -0.28
PPP4R3B-206ENST00000616407 GABRQQ9UN88 632 aa13.33□□□□□ -0.28
PPP4R3B-206ENST00000616407 RBM47A0AV96 593 aaKnown RBP13.33□□□□□ -0.28
PPP4R3B-206ENST00000616407 NR5A2O00482 541 aa13.33□□□□□ -0.28
PPP4R3B-206ENST00000616407 CCL22O00626 93 aa13.33□□□□□ -0.28
PPP4R3B-206ENST00000616407 FAM163BP0C2L3 166 aa13.33□□□□□ -0.28
PPP4R3B-206ENST00000616407 VAV1P15498 845 aa13.33□□□□□ -0.28
PPP4R3B-206ENST00000616407 RAG1P15918 1043 aa13.33□□□□□ -0.28
PPP4R3B-206ENST00000616407 RHOQP17081 205 aa13.33□□□□□ -0.28
PPP4R3B-206ENST00000616407 DSG1Q02413 1049 aa13.33□□□□□ -0.28
PPP4R3B-206ENST00000616407 DSC2Q02487 901 aa13.33□□□□□ -0.28
PPP4R3B-206ENST00000616407 PPIDQ08752 370 aaKnown RBP13.33□□□□□ -0.28
PPP4R3B-206ENST00000616407 SLC10A2Q12908 348 aaPredicted RBP13.33□□□□□ -0.28
PPP4R3B-206ENST00000616407 RFWD3Q6PCD5 774 aa13.33□□□□□ -0.28
PPP4R3B-206ENST00000616407 CIR1Q86X95 450 aaPredicted RBP13.33□□□□□ -0.28
PPP4R3B-206ENST00000616407 EFCAB3Q8N7B9 438 aa13.33□□□□□ -0.28
PPP4R3B-206ENST00000616407 DEFB118Q96PH6 123 aa13.33□□□□□ -0.28
PPP4R3B-206ENST00000616407 TM6SF2Q9BZW4 377 aa13.33□□□□□ -0.28
PPP4R3B-206ENST00000616407 ZNF358Q9NW07 568 aa13.33□□□□□ -0.28
PPP4R3B-206ENST00000616407 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.33□□□□□ -0.28
PPP4R3B-206ENST00000616407 RAP2CQ9Y3L5 183 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms