RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 MTBPQ96DY7 904 aa13.28□□□□□ -0.28
FOXN3-219ENST00000615335 CLIP3Q96DZ5 547 aa13.28□□□□□ -0.28
FOXN3-219ENST00000615335 SMOQ99835 787 aa13.28□□□□□ -0.28
FOXN3-219ENST00000615335 CLSTN3Q9BQT9 956 aa13.28□□□□□ -0.28
FOXN3-219ENST00000615335 NEURL2Q9BR09 285 aa13.28□□□□□ -0.28
FOXN3-219ENST00000615335 DHRS4Q9BTZ2 278 aa13.28□□□□□ -0.28
FOXN3-219ENST00000615335 SLC4A5Q9BY07 1137 aa13.28□□□□□ -0.28
FOXN3-219ENST00000615335 UNKQ9C0B0 810 aaKnown RBP13.28□□□□□ -0.28
FOXN3-219ENST00000615335 TMEM30AQ9NV96 361 aa13.28□□□□□ -0.28
FOXN3-219ENST00000615335 PCDHB5Q9Y5E4 795 aa13.28□□□□□ -0.28
FOXN3-219ENST00000615335 PCDHA11Q9Y5I1 949 aa13.28□□□□□ -0.28
FOXN3-219ENST00000615335 CHD9Q3L8U1 2897 aa13.27□□□□□ -0.28
FOXN3-219ENST00000615335 PTPRDP23468 1912 aa13.27□□□□□ -0.28
FOXN3-219ENST00000615335 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.27□□□□□ -0.29
FOXN3-219ENST00000615335 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.27□□□□□ -0.29
FOXN3-219ENST00000615335 E7ESA3 106 aa13.27□□□□□ -0.29
FOXN3-219ENST00000615335 ADAM12O43184 909 aa13.27□□□□□ -0.29
FOXN3-219ENST00000615335 ADRA1DP25100 572 aa13.27□□□□□ -0.29
FOXN3-219ENST00000615335 PBX2P40425 430 aa13.27□□□□□ -0.29
FOXN3-219ENST00000615335 GABRB2P47870 512 aa13.27□□□□□ -0.29
FOXN3-219ENST00000615335 CDK9P50750 372 aaKnown RBP13.27□□□□□ -0.29
FOXN3-219ENST00000615335 TAZQ16635 292 aa13.27□□□□□ -0.29
FOXN3-219ENST00000615335 BBS9Q3SYG4 887 aa13.27□□□□□ -0.29
FOXN3-219ENST00000615335 RNF19BQ6ZMZ0 732 aa13.27□□□□□ -0.29
FOXN3-219ENST00000615335 SCN4BQ8IWT1 228 aa13.27□□□□□ -0.29
FOXN3-219ENST00000615335 ULK2Q8IYT8 1036 aa13.27□□□□□ -0.29
FOXN3-219ENST00000615335 KCTD6Q8NC69 237 aa13.27□□□□□ -0.29
FOXN3-219ENST00000615335 BORCS5Q969J3 196 aa13.27□□□□□ -0.29
FOXN3-219ENST00000615335 HSFY1Q96LI6 401 aa13.27□□□□□ -0.29
FOXN3-219ENST00000615335 LRRC4Q9HBW1 653 aa13.27□□□□□ -0.29
FOXN3-219ENST00000615335 XPO7Q9UIA9 1087 aaKnown RBP13.27□□□□□ -0.29
FOXN3-219ENST00000615335 CEPT1Q9Y6K0 416 aa13.27□□□□□ -0.29
FOXN3-219ENST00000615335 WDR91A4D1P6 747 aa13.27□□□□□ -0.29
FOXN3-219ENST00000615335 TM9SF1O15321 606 aa13.27□□□□□ -0.29
FOXN3-219ENST00000615335 USP1O94782 785 aa13.27□□□□□ -0.29
FOXN3-219ENST00000615335 TPPPO94811 219 aa13.27□□□□□ -0.29
FOXN3-219ENST00000615335 CD48P09326 243 aa13.27□□□□□ -0.29
FOXN3-219ENST00000615335 CDH3P22223 829 aa13.27□□□□□ -0.29
FOXN3-219ENST00000615335 EIF2B2P49770 351 aaKnown RBP13.27□□□□□ -0.29
FOXN3-219ENST00000615335 ROR1Q01973 937 aa13.27□□□□□ -0.29
FOXN3-219ENST00000615335 METTL21CQ5VZV1 264 aa13.27□□□□□ -0.29
FOXN3-219ENST00000615335 OR6B2Q6IFH4 312 aa13.27□□□□□ -0.29
FOXN3-219ENST00000615335 XYLT1Q86Y38 959 aa13.27□□□□□ -0.29
FOXN3-219ENST00000615335 UNC45BQ8IWX7 931 aa13.27□□□□□ -0.29
FOXN3-219ENST00000615335 PDIK1LQ8N165 341 aa13.27□□□□□ -0.29
FOXN3-219ENST00000615335 ZMIZ2Q8NF64 920 aa13.27□□□□□ -0.29
FOXN3-219ENST00000615335 TCP10LQ8TDR4 215 aa13.27□□□□□ -0.29
FOXN3-219ENST00000615335 USP33Q8TEY7 942 aa13.27□□□□□ -0.29
FOXN3-219ENST00000615335 GDPD5Q8WTR4 605 aa13.27□□□□□ -0.29
FOXN3-219ENST00000615335 DCAKDQ8WVC6 231 aa13.27□□□□□ -0.29
FOXN3-219ENST00000615335 JADE3Q92613 823 aa13.27□□□□□ -0.29
FOXN3-219ENST00000615335 ALKBH8Q96BT7 664 aaKnown RBP13.27□□□□□ -0.29
FOXN3-219ENST00000615335 FUBP3Q96I24 572 aaKnown RBP eCLIP13.27□□□□□ -0.29
FOXN3-219ENST00000615335 WDR83Q9BRX9 315 aaKnown RBP13.27□□□□□ -0.29
FOXN3-219ENST00000615335 PBX4Q9BYU1 374 aa13.27□□□□□ -0.29
FOXN3-219ENST00000615335 ZBP1Q9H171 429 aa13.27□□□□□ -0.29
FOXN3-219ENST00000615335 CSNK1G1Q9HCP0 422 aa13.27□□□□□ -0.29
FOXN3-219ENST00000615335 GIN1Q9NXP7 522 aa13.27□□□□□ -0.29
FOXN3-219ENST00000615335 YBX2Q9Y2T7 364 aaKnown RBP13.27□□□□□ -0.29
FOXN3-219ENST00000615335 TCRBV7S3A2A0A539 114 aa13.26□□□□□ -0.29
FOXN3-219ENST00000615335 WDR27A2RRH5 827 aa13.26□□□□□ -0.29
FOXN3-219ENST00000615335 MTMR11A4FU01 709 aa13.26□□□□□ -0.29
FOXN3-219ENST00000615335 B2RBV5 119 aa13.26□□□□□ -0.29
FOXN3-219ENST00000615335 FAM47E-STBD1D6RA91 191 aa13.26□□□□□ -0.29
FOXN3-219ENST00000615335 PIAS1O75925 651 aa13.26□□□□□ -0.29
FOXN3-219ENST00000615335 TMEM63AO94886 807 aa13.26□□□□□ -0.29
FOXN3-219ENST00000615335 TGDSO95455 350 aa13.26□□□□□ -0.29
FOXN3-219ENST00000615335 ESRRBO95718 433 aa13.26□□□□□ -0.29
FOXN3-219ENST00000615335 CTSAP10619 480 aa13.26□□□□□ -0.29
FOXN3-219ENST00000615335 TSHRP16473 764 aa13.26□□□□□ -0.29
FOXN3-219ENST00000615335 ACADSBP45954 432 aa13.26□□□□□ -0.29
FOXN3-219ENST00000615335 EIF3EP60228 445 aaKnown RBP13.26□□□□□ -0.29
FOXN3-219ENST00000615335 CREB5Q02930 508 aa13.26□□□□□ -0.29
FOXN3-219ENST00000615335 SMARCB1Q12824 385 aa13.26□□□□□ -0.29
FOXN3-219ENST00000615335 APOFQ13790 326 aa13.26□□□□□ -0.29
FOXN3-219ENST00000615335 ARL13BQ3SXY8 428 aa13.26□□□□□ -0.29
FOXN3-219ENST00000615335 DCDC5Q6ZRR9 648 aa13.26□□□□□ -0.29
FOXN3-219ENST00000615335 GET4Q7L5D6 327 aaPredicted RBP13.26□□□□□ -0.29
FOXN3-219ENST00000615335 EMC1Q8N766 993 aa13.26□□□□□ -0.29
FOXN3-219ENST00000615335 MZB1Q8WU39 189 aa13.26□□□□□ -0.29
FOXN3-219ENST00000615335 POF1BQ8WVV4 589 aa13.26□□□□□ -0.29
FOXN3-219ENST00000615335 NACC2Q96BF6 587 aa13.26□□□□□ -0.29
FOXN3-219ENST00000615335 TCF25Q9BQ70 676 aa13.26□□□□□ -0.29
FOXN3-219ENST00000615335 HAUS8Q9BT25 410 aa13.26□□□□□ -0.29
FOXN3-219ENST00000615335 ENTPD7Q9NQZ7 604 aa13.26□□□□□ -0.29
FOXN3-219ENST00000615335 PCSK1NQ9UHG2 260 aa13.26□□□□□ -0.29
FOXN3-219ENST00000615335 SLC27A5Q9Y2P5 690 aa13.26□□□□□ -0.29
FOXN3-219ENST00000615335 GOLGA8RI6L899 631 aa13.25□□□□□ -0.29
FOXN3-219ENST00000615335 CASQ2O14958 399 aaPredicted RBP13.25□□□□□ -0.29
FOXN3-219ENST00000615335 CXCL14O95715 111 aa13.25□□□□□ -0.29
FOXN3-219ENST00000615335 ERVFC1P60507 584 aa13.25□□□□□ -0.29
FOXN3-219ENST00000615335 BASP1P80723 227 aaKnown RBP13.25□□□□□ -0.29
FOXN3-219ENST00000615335 NSUN2Q08J23 767 aaKnown RBP eCLIP13.25□□□□□ -0.29
FOXN3-219ENST00000615335 ADIGQ0VDE8 80 aa13.25□□□□□ -0.29
FOXN3-219ENST00000615335 DUSP4Q13115 394 aa13.25□□□□□ -0.29
FOXN3-219ENST00000615335 FAM102AQ5T9C2 384 aaPredicted RBP13.25□□□□□ -0.29
FOXN3-219ENST00000615335 FAAH2Q6GMR7 532 aa13.25□□□□□ -0.29
FOXN3-219ENST00000615335 FAM183BPQ6ZVS7 135 aa13.25□□□□□ -0.29
FOXN3-219ENST00000615335 SIX6OS1Q8N1H7 587 aa13.25□□□□□ -0.29
FOXN3-219ENST00000615335 BANPQ8N9N5 519 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms