RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 ARRDC2Q8TBH0 407 aa13.97□□□□□ -0.17
TMEM254-213ENST00000613758 WFIKKN2Q8TEU8 576 aa13.97□□□□□ -0.17
TMEM254-213ENST00000613758 NXPE3Q969Y0 559 aa13.97□□□□□ -0.17
TMEM254-213ENST00000613758 IMP4Q96G21 291 aaKnown RBP13.97□□□□□ -0.17
TMEM254-213ENST00000613758 RPL10LQ96L21 214 aaKnown RBP13.97□□□□□ -0.17
TMEM254-213ENST00000613758 PPP1R2P1Q96PQ5 205 aa13.97□□□□□ -0.17
TMEM254-213ENST00000613758 RBM15Q96T37 977 aaKnown RBP eCLIP13.97□□□□□ -0.17
TMEM254-213ENST00000613758 SEMA3CQ99985 751 aa13.97□□□□□ -0.17
TMEM254-213ENST00000613758 MGME1Q9BQP7 344 aa13.97□□□□□ -0.17
TMEM254-213ENST00000613758 FOXP3Q9BZS1 431 aa13.97□□□□□ -0.17
TMEM254-213ENST00000613758 TSPYL1Q9H0U9 437 aa13.97□□□□□ -0.17
TMEM254-213ENST00000613758 KCNK12Q9HB15 430 aa13.97□□□□□ -0.17
TMEM254-213ENST00000613758 AAR2Q9Y312 384 aaKnown RBP13.97□□□□□ -0.17
TMEM254-213ENST00000613758 FCF1Q9Y324 198 aaKnown RBP13.97□□□□□ -0.17
TMEM254-213ENST00000613758 GOLGA6CA6NDK9 693 aa13.96□□□□□ -0.17
TMEM254-213ENST00000613758 SMAD6O43541 496 aaKnown RBP13.96□□□□□ -0.17
TMEM254-213ENST00000613758 MT-CYBP00156 380 aaPredicted RBP13.96□□□□□ -0.17
TMEM254-213ENST00000613758 GOLGA6DP0CG33 693 aa13.96□□□□□ -0.17
TMEM254-213ENST00000613758 GYS2P54840 703 aa13.96□□□□□ -0.17
TMEM254-213ENST00000613758 GEMP55040 296 aa13.96□□□□□ -0.17
TMEM254-213ENST00000613758 RHOAP61586 193 aa13.96□□□□□ -0.17
TMEM254-213ENST00000613758 SPARCL1Q14515 664 aa13.96□□□□□ -0.17
TMEM254-213ENST00000613758 CEP85LQ5SZL2 805 aa13.96□□□□□ -0.17
TMEM254-213ENST00000613758 KCTD11Q693B1 232 aa13.96□□□□□ -0.17
TMEM254-213ENST00000613758 TRMT10CQ7L0Y3 403 aaKnown RBP13.96□□□□□ -0.17
TMEM254-213ENST00000613758 PRPF39Q86UA1 669 aaKnown RBP13.96□□□□□ -0.17
TMEM254-213ENST00000613758 KLHDC8BQ8IXV7 354 aa13.96□□□□□ -0.17
TMEM254-213ENST00000613758 SLC44A3Q8N4M1 653 aa13.96□□□□□ -0.17
TMEM254-213ENST00000613758 CSGALNACT1Q8TDX6 532 aa13.96□□□□□ -0.17
TMEM254-213ENST00000613758 TMBIM4Q9HC24 238 aa13.96□□□□□ -0.17
TMEM254-213ENST00000613758 GOLGA6AQ9NYA3 693 aa13.96□□□□□ -0.17
TMEM254-213ENST00000613758 VPS18Q9P253 973 aa13.96□□□□□ -0.17
TMEM254-213ENST00000613758 LHX3Q9UBR4 397 aa13.96□□□□□ -0.17
TMEM254-213ENST00000613758 SLC25A13Q9UJS0 675 aa13.96□□□□□ -0.17
TMEM254-213ENST00000613758 ERI2A8K979 691 aaKnown RBP13.96□□□□□ -0.18
TMEM254-213ENST00000613758 GOLGA8KD6RF30 607 aa13.96□□□□□ -0.18
TMEM254-213ENST00000613758 AP2A1O95782 977 aa13.96□□□□□ -0.18
TMEM254-213ENST00000613758 OPRD1P41143 372 aa13.96□□□□□ -0.18
TMEM254-213ENST00000613758 CD86P42081 329 aa13.96□□□□□ -0.18
TMEM254-213ENST00000613758 RGRP47804 291 aa13.96□□□□□ -0.18
TMEM254-213ENST00000613758 STK19P49842 368 aaPredicted RBP13.96□□□□□ -0.18
TMEM254-213ENST00000613758 SARNPP82979 210 aaKnown RBP13.96□□□□□ -0.18
TMEM254-213ENST00000613758 KDSRQ06136 332 aa13.96□□□□□ -0.18
TMEM254-213ENST00000613758 MESP2Q0VG99 397 aa13.96□□□□□ -0.18
TMEM254-213ENST00000613758 PUS10Q3MIT2 529 aaKnown RBP13.96□□□□□ -0.18
TMEM254-213ENST00000613758 NAIF1Q69YI7 327 aaPredicted RBP13.96□□□□□ -0.18
TMEM254-213ENST00000613758 ALG1LQ6GMV1 187 aa13.96□□□□□ -0.18
TMEM254-213ENST00000613758 PPP1R21Q6ZMI0 780 aa13.96□□□□□ -0.18
TMEM254-213ENST00000613758 METTL3Q86U44 580 aaKnown RBP13.96□□□□□ -0.18
TMEM254-213ENST00000613758 FRMD8Q9BZ67 464 aaPredicted RBP13.96□□□□□ -0.18
TMEM254-213ENST00000613758 CIPCQ9C0C6 399 aa13.96□□□□□ -0.18
TMEM254-213ENST00000613758 ERVW-1Q9UQF0 538 aa13.96□□□□□ -0.18
TMEM254-213ENST00000613758 FAM50BQ9Y247 325 aa13.96□□□□□ -0.18
TMEM254-213ENST00000613758 HS3ST2Q9Y278 367 aa13.96□□□□□ -0.18
TMEM254-213ENST00000613758 GJB3O75712 270 aa13.95□□□□□ -0.18
TMEM254-213ENST00000613758 SUN1O94901 812 aa13.95□□□□□ -0.18
TMEM254-213ENST00000613758 MMP2P08253 660 aa13.95□□□□□ -0.18
TMEM254-213ENST00000613758 SRCP12931 536 aa13.95□□□□□ -0.18
TMEM254-213ENST00000613758 GRIA1P42261 906 aa13.95□□□□□ -0.18
TMEM254-213ENST00000613758 SCNN1BP51168 640 aa13.95□□□□□ -0.18
TMEM254-213ENST00000613758 ARL4CP56559 192 aa13.95□□□□□ -0.18
TMEM254-213ENST00000613758 TFF2Q03403 129 aa13.95□□□□□ -0.18
TMEM254-213ENST00000613758 NSUN2Q08J23 767 aaKnown RBP eCLIP13.95□□□□□ -0.18
TMEM254-213ENST00000613758 HIF1AQ16665 826 aa13.95□□□□□ -0.18
TMEM254-213ENST00000613758 FNBP1LQ5T0N5 605 aa13.95□□□□□ -0.18
TMEM254-213ENST00000613758 DENND2CQ68D51 928 aa13.95□□□□□ -0.18
TMEM254-213ENST00000613758 RNF135Q8IUD6 432 aa13.95□□□□□ -0.18
TMEM254-213ENST00000613758 SH2D3CQ8N5H7 860 aa13.95□□□□□ -0.18
TMEM254-213ENST00000613758 MAFAQ8NHW3 353 aaPredicted RBP13.95□□□□□ -0.18
TMEM254-213ENST00000613758 SORCS1Q8WY21 1168 aa13.95□□□□□ -0.18
TMEM254-213ENST00000613758 EXOC2Q96KP1 924 aa13.95□□□□□ -0.18
TMEM254-213ENST00000613758 LRRC40Q9H9A6 602 aa13.95□□□□□ -0.18
TMEM254-213ENST00000613758 ELOVL2Q9NXB9 296 aa13.95□□□□□ -0.18
TMEM254-213ENST00000613758 NINJ2Q9NZG7 142 aa13.95□□□□□ -0.18
TMEM254-213ENST00000613758 SLCO3A1Q9UIG8 710 aa13.95□□□□□ -0.18
TMEM254-213ENST00000613758 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.95□□□□□ -0.18
TMEM254-213ENST00000613758 PRRT4C9JH25 899 aa13.95□□□□□ -0.18
TMEM254-213ENST00000613758 PMPCBO75439 489 aa13.95□□□□□ -0.18
TMEM254-213ENST00000613758 ASLP04424 464 aa13.95□□□□□ -0.18
TMEM254-213ENST00000613758 ATP5BP06576 529 aaKnown RBP13.95□□□□□ -0.18
TMEM254-213ENST00000613758 CES1P23141 567 aa13.95□□□□□ -0.18
TMEM254-213ENST00000613758 EIF2DP41214 584 aaKnown RBP13.95□□□□□ -0.18
TMEM254-213ENST00000613758 SOX9P48436 509 aa13.95□□□□□ -0.18
TMEM254-213ENST00000613758 SKOR1P84550 965 aa13.95□□□□□ -0.18
TMEM254-213ENST00000613758 MPP3Q13368 585 aa13.95□□□□□ -0.18
TMEM254-213ENST00000613758 IHHQ14623 411 aa13.95□□□□□ -0.18
TMEM254-213ENST00000613758 CAND1Q86VP6 1230 aaKnown RBP13.95□□□□□ -0.18
TMEM254-213ENST00000613758 PDIK1LQ8N165 341 aa13.95□□□□□ -0.18
TMEM254-213ENST00000613758 PHTF2Q8N3S3 785 aa13.95□□□□□ -0.18
TMEM254-213ENST00000613758 IPMKQ8NFU5 416 aa13.95□□□□□ -0.18
TMEM254-213ENST00000613758 CYB5D2Q8WUJ1 264 aa13.95□□□□□ -0.18
TMEM254-213ENST00000613758 TADA1Q96BN2 335 aa13.95□□□□□ -0.18
TMEM254-213ENST00000613758 CHFRQ96EP1 664 aa13.95□□□□□ -0.18
TMEM254-213ENST00000613758 SERPINB12Q96P63 405 aa13.95□□□□□ -0.18
TMEM254-213ENST00000613758 NUDCD1Q96RS6 583 aa13.95□□□□□ -0.18
TMEM254-213ENST00000613758 NOD2Q9HC29 1040 aa13.95□□□□□ -0.18
TMEM254-213ENST00000613758 SCUBE2Q9NQ36 999 aa13.95□□□□□ -0.18
TMEM254-213ENST00000613758 VPS45Q9NRW7 570 aa13.95□□□□□ -0.18
TMEM254-213ENST00000613758 INSIG1O15503 277 aa13.94□□□□□ -0.18
TMEM254-213ENST00000613758 TIMM44O43615 452 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms