RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 PAK4O96013 591 aaPredicted RBP18.08■□□□□ 0.48
SSBP1-215ENST00000612337 HNRNPKP61978 463 aaKnown RBP eCLIP18.08■□□□□ 0.48
SSBP1-215ENST00000612337 FAM72AQ5TYM5 149 aa18.08■□□□□ 0.48
SSBP1-215ENST00000612337 FAM72DQ6L9T8 149 aa18.08■□□□□ 0.48
SSBP1-215ENST00000612337 FAM72BQ86X60 149 aa18.08■□□□□ 0.48
SSBP1-215ENST00000612337 JOSD2Q8TAC2 188 aa18.08■□□□□ 0.48
SSBP1-215ENST00000612337 SLC30A5Q8TAD4 765 aa18.08■□□□□ 0.48
SSBP1-215ENST00000612337 GPT2Q8TD30 523 aa18.08■□□□□ 0.48
SSBP1-215ENST00000612337 RAB7BQ96AH8 199 aa18.08■□□□□ 0.48
SSBP1-215ENST00000612337 CRELD1Q96HD1 420 aa18.08■□□□□ 0.48
SSBP1-215ENST00000612337 LENG8Q96PV6 779 aaPredicted RBP18.08■□□□□ 0.48
SSBP1-215ENST00000612337 TM6SF2Q9BZW4 377 aa18.08■□□□□ 0.48
SSBP1-215ENST00000612337 MAGEH1Q9H213 219 aa18.08■□□□□ 0.48
SSBP1-215ENST00000612337 FAM207AQ9NSI2 230 aaPredicted RBP18.08■□□□□ 0.48
SSBP1-215ENST00000612337 DNAJC28Q9NX36 388 aa18.08■□□□□ 0.48
SSBP1-215ENST00000612337 DNAI1Q9UI46 699 aa18.08■□□□□ 0.48
SSBP1-215ENST00000612337 NEU3Q9UQ49 428 aa18.08■□□□□ 0.48
SSBP1-215ENST00000612337 NEMP2A6NFY4 417 aa18.07■□□□□ 0.48
SSBP1-215ENST00000612337 C16orf96A6NNT2 1141 aa18.07■□□□□ 0.48
SSBP1-215ENST00000612337 SCAMP1O15126 338 aa18.07■□□□□ 0.48
SSBP1-215ENST00000612337 EPHB6O15197 1021 aa18.07■□□□□ 0.48
SSBP1-215ENST00000612337 RAD51BO15315 384 aa18.07■□□□□ 0.48
SSBP1-215ENST00000612337 TSPAN6O43657 245 aa18.07■□□□□ 0.48
SSBP1-215ENST00000612337 LRIG2O94898 1065 aa18.07■□□□□ 0.48
SSBP1-215ENST00000612337 GSRP00390 522 aa18.07■□□□□ 0.48
SSBP1-215ENST00000612337 MT-CO3P00414 261 aa18.07■□□□□ 0.48
SSBP1-215ENST00000612337 TPM2P07951 284 aa18.07■□□□□ 0.48
SSBP1-215ENST00000612337 PLEKP08567 350 aaPredicted RBP18.07■□□□□ 0.48
SSBP1-215ENST00000612337 UNGP13051 313 aaPredicted RBP18.07■□□□□ 0.48
SSBP1-215ENST00000612337 RABIFP47224 123 aa18.07■□□□□ 0.48
SSBP1-215ENST00000612337 GSCP56915 257 aaPredicted RBP18.07■□□□□ 0.48
SSBP1-215ENST00000612337 PTP4A2Q12974 167 aa18.07■□□□□ 0.48
SSBP1-215ENST00000612337 FZD2Q14332 565 aa18.07■□□□□ 0.48
SSBP1-215ENST00000612337 ZNF542PQ5EBM4 170 aa18.07■□□□□ 0.48
SSBP1-215ENST00000612337 FKBP15Q5T1M5 1219 aa18.07■□□□□ 0.48
SSBP1-215ENST00000612337 TMC6Q7Z403 805 aa18.07■□□□□ 0.48
SSBP1-215ENST00000612337 RYBPQ8N488 228 aaPredicted RBP18.07■□□□□ 0.48
SSBP1-215ENST00000612337 CCDC185Q8N715 623 aa18.07■□□□□ 0.48
SSBP1-215ENST00000612337 FAM181AQ8N9Y4 354 aa18.07■□□□□ 0.48
SSBP1-215ENST00000612337 SNIP1Q8TAD8 396 aaKnown RBP18.07■□□□□ 0.48
SSBP1-215ENST00000612337 NTAN1Q96AB6 310 aa18.07■□□□□ 0.48
SSBP1-215ENST00000612337 TBC1D31Q96DN5 1066 aa18.07■□□□□ 0.48
SSBP1-215ENST00000612337 BBC3Q96PG8 261 aaPredicted RBP18.07■□□□□ 0.48
SSBP1-215ENST00000612337 KLF6Q99612 283 aaPredicted RBP18.07■□□□□ 0.48
SSBP1-215ENST00000612337 DUSP23Q9BVJ7 150 aa18.07■□□□□ 0.48
SSBP1-215ENST00000612337 C1QTNF2Q9BXJ5 285 aa18.07■□□□□ 0.48
SSBP1-215ENST00000612337 CAAP1Q9H8G2 361 aa18.07■□□□□ 0.48
SSBP1-215ENST00000612337 USP29Q9HBJ7 922 aa18.07■□□□□ 0.48
SSBP1-215ENST00000612337 NLRC4Q9NPP4 1024 aa18.07■□□□□ 0.48
SSBP1-215ENST00000612337 HPCAL4Q9UM19 191 aa18.07■□□□□ 0.48
SSBP1-215ENST00000612337 SPTY2D1-AS1A0A0U1RR47 76 aa18.06■□□□□ 0.48
SSBP1-215ENST00000612337 RRP8O43159 456 aaKnown RBP18.06■□□□□ 0.48
SSBP1-215ENST00000612337 BRINP1O60477 761 aa18.06■□□□□ 0.48
SSBP1-215ENST00000612337 RAMP2O60895 175 aa18.06■□□□□ 0.48
SSBP1-215ENST00000612337 GJB6O95452 261 aa18.06■□□□□ 0.48
SSBP1-215ENST00000612337 CSF2P04141 144 aa18.06■□□□□ 0.48
SSBP1-215ENST00000612337 ATXN8OSP0DMR3 200 aa18.06■□□□□ 0.48
SSBP1-215ENST00000612337 KRT3P12035 628 aa18.06■□□□□ 0.48
SSBP1-215ENST00000612337 NME1P15531 152 aaKnown RBP18.06■□□□□ 0.48
SSBP1-215ENST00000612337 ITPKBP27987 946 aa18.06■□□□□ 0.48
SSBP1-215ENST00000612337 GKP32189 559 aa18.06■□□□□ 0.48
SSBP1-215ENST00000612337 ANP32AP39687 249 aaKnown RBP18.06■□□□□ 0.48
SSBP1-215ENST00000612337 STAT1P42224 750 aa18.06■□□□□ 0.48
SSBP1-215ENST00000612337 ABL2P42684 1182 aa18.06■□□□□ 0.48
SSBP1-215ENST00000612337 NSFP46459 744 aaKnown RBP18.06■□□□□ 0.48
SSBP1-215ENST00000612337 HDAC4P56524 1084 aa18.06■□□□□ 0.48
SSBP1-215ENST00000612337 SNRPD1P62314 119 aaKnown RBP18.06■□□□□ 0.48
SSBP1-215ENST00000612337 SGCGQ13326 291 aa18.06■□□□□ 0.48
SSBP1-215ENST00000612337 POLD3Q15054 466 aaPredicted RBP18.06■□□□□ 0.48
SSBP1-215ENST00000612337 ZNF805Q5CZA5 627 aa18.06■□□□□ 0.48
SSBP1-215ENST00000612337 LRRC69Q6ZNQ3 347 aa18.06■□□□□ 0.48
SSBP1-215ENST00000612337 PARGQ86W56 976 aa18.06■□□□□ 0.48
SSBP1-215ENST00000612337 OR2AP1Q8NGE2 309 aa18.06■□□□□ 0.48
SSBP1-215ENST00000612337 OR6K2Q8NGY2 324 aa18.06■□□□□ 0.48
SSBP1-215ENST00000612337 FAM172AQ8WUF8 416 aa18.06■□□□□ 0.48
SSBP1-215ENST00000612337 ASB12Q8WXK4 309 aa18.06■□□□□ 0.48
SSBP1-215ENST00000612337 BAP1Q92560 729 aa18.06■□□□□ 0.48
SSBP1-215ENST00000612337 VOPP1Q96AW1 172 aa18.06■□□□□ 0.48
SSBP1-215ENST00000612337 APOLD1Q96LR9 279 aa18.06■□□□□ 0.48
SSBP1-215ENST00000612337 PCDHB18PQ96TA0 734 aa18.06■□□□□ 0.48
SSBP1-215ENST00000612337 OSBPL1AQ9BXW6 950 aa18.06■□□□□ 0.48
SSBP1-215ENST00000612337 MAGEB5Q9BZ81 275 aa18.06■□□□□ 0.48
SSBP1-215ENST00000612337 ADAM22Q9P0K1 906 aa18.06■□□□□ 0.48
SSBP1-215ENST00000612337 SIK3Q9Y2K2 1263 aa18.06■□□□□ 0.48
SSBP1-215ENST00000612337 GCN1Q92616 2671 aaKnown RBP18.06■□□□□ 0.48
SSBP1-215ENST00000612337 LY6G6EA0A0G2JKS1 128 aa18.05■□□□□ 0.48
SSBP1-215ENST00000612337 ZSCAN5CA6NGD5 496 aaPredicted RBP18.05■□□□□ 0.48
SSBP1-215ENST00000612337 IGLON5A6NGN9 336 aa18.05■□□□□ 0.48
SSBP1-215ENST00000612337 K7ESM1 405 aa18.05■□□□□ 0.48
SSBP1-215ENST00000612337 FPGTO14772 594 aa18.05■□□□□ 0.48
SSBP1-215ENST00000612337 POP4O95707 220 aaKnown RBP18.05■□□□□ 0.48
SSBP1-215ENST00000612337 GP1BAP07359 652 aa18.05■□□□□ 0.48
SSBP1-215ENST00000612337 RFC1P35251 1148 aaPredicted RBP18.05■□□□□ 0.48
SSBP1-215ENST00000612337 DUSP3P51452 185 aaPredicted RBP18.05■□□□□ 0.48
SSBP1-215ENST00000612337 MYLK3Q32MK0 819 aa18.05■□□□□ 0.48
SSBP1-215ENST00000612337 CDCP2Q5VXM1 449 aa18.05■□□□□ 0.48
SSBP1-215ENST00000612337 KDM7AQ6ZMT4 941 aa18.05■□□□□ 0.48
SSBP1-215ENST00000612337 DENND6BQ8NEG7 585 aa18.05■□□□□ 0.48
SSBP1-215ENST00000612337 ZNF548Q8NEK5 533 aaPredicted RBP18.05■□□□□ 0.48
SSBP1-215ENST00000612337 FGF11Q92914 225 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms