RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 BRD8Q9H0E9 1235 aa14.23□□□□□ -0.13
COL6A1-207ENST00000612273 FAM96AQ9H5X1 160 aa14.23□□□□□ -0.13
COL6A1-207ENST00000612273 DMAP1Q9NPF5 467 aaPredicted RBP14.23□□□□□ -0.13
COL6A1-207ENST00000612273 PTGDR2Q9Y5Y4 395 aa14.23□□□□□ -0.13
COL6A1-207ENST00000612273 ZNF638Q14966 1978 aaKnown RBP14.23□□□□□ -0.13
COL6A1-207ENST00000612273 CKMT2P17540 419 aa14.23□□□□□ -0.13
COL6A1-207ENST00000612273 CLCNKBP51801 687 aa14.23□□□□□ -0.13
COL6A1-207ENST00000612273 SNX17Q15036 470 aa14.23□□□□□ -0.13
COL6A1-207ENST00000612273 PAFAH1B3Q15102 231 aaKnown RBP14.23□□□□□ -0.13
COL6A1-207ENST00000612273 SV2CQ496J9 727 aa14.23□□□□□ -0.13
COL6A1-207ENST00000612273 TRIM67Q6ZTA4 783 aa14.23□□□□□ -0.13
COL6A1-207ENST00000612273 CYS1Q717R9 158 aa14.23□□□□□ -0.13
COL6A1-207ENST00000612273 SLC16A10Q8TF71 515 aa14.23□□□□□ -0.13
COL6A1-207ENST00000612273 DRC3Q9H069 523 aa14.23□□□□□ -0.13
COL6A1-207ENST00000612273 GBA3Q9H227 469 aa14.23□□□□□ -0.13
COL6A1-207ENST00000612273 EFCAB1Q9HAE3 211 aa14.23□□□□□ -0.13
COL6A1-207ENST00000612273 CASS4Q9NQ75 786 aa14.23□□□□□ -0.13
COL6A1-207ENST00000612273 EIF2B3Q9NR50 452 aaKnown RBP14.23□□□□□ -0.13
COL6A1-207ENST00000612273 V9GYQ6 96 aa14.23□□□□□ -0.13
COL6A1-207ENST00000612273 E7ENX8 843 aa14.23□□□□□ -0.13
COL6A1-207ENST00000612273 TFAP2AP05549 437 aa14.23□□□□□ -0.13
COL6A1-207ENST00000612273 MYL3P08590 195 aa14.23□□□□□ -0.13
COL6A1-207ENST00000612273 RPS6KA3P51812 740 aa14.23□□□□□ -0.13
COL6A1-207ENST00000612273 PRPSAP1Q14558 356 aa14.23□□□□□ -0.13
COL6A1-207ENST00000612273 ZNF423Q2M1K9 1284 aa14.23□□□□□ -0.13
COL6A1-207ENST00000612273 ARL13BQ3SXY8 428 aa14.23□□□□□ -0.13
COL6A1-207ENST00000612273 STXBP5Q5T5C0 1151 aa14.23□□□□□ -0.13
COL6A1-207ENST00000612273 MAP3K21Q5TCX8 1036 aa14.23□□□□□ -0.13
COL6A1-207ENST00000612273 IFNEQ86WN2 208 aa14.23□□□□□ -0.13
COL6A1-207ENST00000612273 IFNLR1Q8IU57 520 aaPredicted RBP14.23□□□□□ -0.13
COL6A1-207ENST00000612273 METTL25Q8N6Q8 603 aa14.23□□□□□ -0.13
COL6A1-207ENST00000612273 HNRNPABQ99729 332 aaKnown RBP14.23□□□□□ -0.13
COL6A1-207ENST00000612273 RNF181Q9P0P0 153 aa14.23□□□□□ -0.13
COL6A1-207ENST00000612273 FAM149AA5PLN7 773 aa14.22□□□□□ -0.13
COL6A1-207ENST00000612273 OR51F1A6NGY5 319 aa14.22□□□□□ -0.13
COL6A1-207ENST00000612273 HNRNPRO43390 633 aaKnown RBP14.22□□□□□ -0.13
COL6A1-207ENST00000612273 STAU1O95793 577 aaKnown RBP14.22□□□□□ -0.13
COL6A1-207ENST00000612273 UGT1A6P19224 532 aa14.22□□□□□ -0.13
COL6A1-207ENST00000612273 SLC1A2P43004 574 aa14.22□□□□□ -0.13
COL6A1-207ENST00000612273 CDH15P55291 814 aa14.22□□□□□ -0.13
COL6A1-207ENST00000612273 DAOAP59103 153 aa14.22□□□□□ -0.13
COL6A1-207ENST00000612273 COG7P83436 770 aa14.22□□□□□ -0.13
COL6A1-207ENST00000612273 CDK18Q07002 472 aa14.22□□□□□ -0.13
COL6A1-207ENST00000612273 PRKAA1Q13131 559 aa14.22□□□□□ -0.13
COL6A1-207ENST00000612273 SNAPC2Q13487 334 aa14.22□□□□□ -0.13
COL6A1-207ENST00000612273 HNRNPDQ14103 355 aaKnown RBP14.22□□□□□ -0.13
COL6A1-207ENST00000612273 SDHAF4Q5VUM1 108 aa14.22□□□□□ -0.13
COL6A1-207ENST00000612273 ZYG11AQ6WRX3 759 aa14.22□□□□□ -0.13
COL6A1-207ENST00000612273 ZMIZ2Q8NF64 920 aa14.22□□□□□ -0.13
COL6A1-207ENST00000612273 SLC10A4Q96EP9 437 aa14.22□□□□□ -0.13
COL6A1-207ENST00000612273 TEKT5Q96M29 485 aa14.22□□□□□ -0.13
COL6A1-207ENST00000612273 ZNF512Q96ME7 567 aaPredicted RBP14.22□□□□□ -0.13
COL6A1-207ENST00000612273 IL22Q9GZX6 179 aa14.22□□□□□ -0.13
COL6A1-207ENST00000612273 AURKCQ9UQB9 309 aa14.22□□□□□ -0.13
COL6A1-207ENST00000612273 CRYL1Q9Y2S2 319 aa14.22□□□□□ -0.13
COL6A1-207ENST00000612273 CXCL11O14625 94 aa14.22□□□□□ -0.13
COL6A1-207ENST00000612273 PYGLP06737 847 aa14.22□□□□□ -0.13
COL6A1-207ENST00000612273 PIRTP0C851 137 aa14.22□□□□□ -0.13
COL6A1-207ENST00000612273 PPIDQ08752 370 aaKnown RBP14.22□□□□□ -0.13
COL6A1-207ENST00000612273 SLC12A1Q13621 1099 aa14.22□□□□□ -0.13
COL6A1-207ENST00000612273 MTX3Q5HYI7 312 aa14.22□□□□□ -0.13
COL6A1-207ENST00000612273 TAC4Q86UU9 113 aa14.22□□□□□ -0.13
COL6A1-207ENST00000612273 FAM35AQ86V20 835 aa14.22□□□□□ -0.13
COL6A1-207ENST00000612273 ZNF410Q86VK4 478 aa14.22□□□□□ -0.13
COL6A1-207ENST00000612273 KLHL5Q96PQ7 755 aa14.22□□□□□ -0.13
COL6A1-207ENST00000612273 RHOJQ9H4E5 214 aa14.22□□□□□ -0.13
COL6A1-207ENST00000612273 PIF1Q9H611 641 aa14.22□□□□□ -0.13
COL6A1-207ENST00000612273 TSR3Q9UJK0 312 aaKnown RBP14.22□□□□□ -0.13
COL6A1-207ENST00000612273 FBXW11Q9UKB1 542 aa14.22□□□□□ -0.13
COL6A1-207ENST00000612273 H3BSA7 217 aa14.21□□□□□ -0.13
COL6A1-207ENST00000612273 PDHXO00330 501 aa14.21□□□□□ -0.13
COL6A1-207ENST00000612273 ALOX15P16050 662 aaPredicted RBP14.21□□□□□ -0.13
COL6A1-207ENST00000612273 PGFP49763 221 aa14.21□□□□□ -0.13
COL6A1-207ENST00000612273 PTPRCAPQ14761 206 aa14.21□□□□□ -0.13
COL6A1-207ENST00000612273 ITPRIPL1Q6GPH6 555 aa14.21□□□□□ -0.13
COL6A1-207ENST00000612273 NAPEPLDQ6IQ20 393 aa14.21□□□□□ -0.13
COL6A1-207ENST00000612273 CLEC14AQ86T13 490 aa14.21□□□□□ -0.13
COL6A1-207ENST00000612273 ATPAF2Q8N5M1 289 aa14.21□□□□□ -0.13
COL6A1-207ENST00000612273 C3orf58Q8NDZ4 430 aa14.21□□□□□ -0.13
COL6A1-207ENST00000612273 RBM22Q9NW64 420 aaKnown RBP eCLIP14.21□□□□□ -0.13
COL6A1-207ENST00000612273 DSEQ9UL01 958 aa14.21□□□□□ -0.13
COL6A1-207ENST00000612273 PPP6CO00743 305 aa14.21□□□□□ -0.13
COL6A1-207ENST00000612273 SUPT7LO94864 414 aa14.21□□□□□ -0.13
COL6A1-207ENST00000612273 POMCP01189 267 aa14.21□□□□□ -0.13
COL6A1-207ENST00000612273 C1QTNF8P60827 252 aa14.21□□□□□ -0.13
COL6A1-207ENST00000612273 MYBPC1Q00872 1141 aa14.21□□□□□ -0.13
COL6A1-207ENST00000612273 ADGRE1Q14246 886 aa14.21□□□□□ -0.13
COL6A1-207ENST00000612273 MYLK3Q32MK0 819 aa14.21□□□□□ -0.13
COL6A1-207ENST00000612273 PIGGQ5H8A4 983 aa14.21□□□□□ -0.13
COL6A1-207ENST00000612273 OGFRL1Q5TC84 451 aaPredicted RBP14.21□□□□□ -0.13
COL6A1-207ENST00000612273 ADGRG6Q86SQ4 1221 aa14.21□□□□□ -0.13
COL6A1-207ENST00000612273 TMEM151AQ8N4L1 468 aa14.21□□□□□ -0.13
COL6A1-207ENST00000612273 RP9Q8TA86 221 aaKnown RBP14.21□□□□□ -0.13
COL6A1-207ENST00000612273 SH3RF2Q8TEC5 729 aa14.21□□□□□ -0.13
COL6A1-207ENST00000612273 TMIGD2Q96BF3 282 aa14.21□□□□□ -0.13
COL6A1-207ENST00000612273 PABPC5Q96DU9 382 aaKnown RBP14.21□□□□□ -0.13
COL6A1-207ENST00000612273 TSPYL2Q9H2G4 693 aaPredicted RBP14.21□□□□□ -0.13
COL6A1-207ENST00000612273 NOL11Q9H8H0 719 aaKnown RBP14.21□□□□□ -0.13
COL6A1-207ENST00000612273 COQ10BQ9H8M1 238 aa14.21□□□□□ -0.13
COL6A1-207ENST00000612273 IRAK4Q9NWZ3 460 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms