RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 CINPQ9BW66 212 aaPredicted RBP12.54□□□□□ -0.4
CBWD3-208ENST00000612050 TM7SF3Q9NS93 570 aa12.54□□□□□ -0.4
CBWD3-208ENST00000612050 NEU3Q9UQ49 428 aa12.54□□□□□ -0.4
CBWD3-208ENST00000612050 CHD5Q8TDI0 1954 aa12.53□□□□□ -0.4
CBWD3-208ENST00000612050 FLRT2O43155 660 aa12.53□□□□□ -0.4
CBWD3-208ENST00000612050 PALMO75781 387 aa12.53□□□□□ -0.4
CBWD3-208ENST00000612050 IPO7O95373 1038 aaKnown RBP12.53□□□□□ -0.4
CBWD3-208ENST00000612050 CTSLP07711 333 aa12.53□□□□□ -0.4
CBWD3-208ENST00000612050 ADRB1P08588 477 aa12.53□□□□□ -0.4
CBWD3-208ENST00000612050 KRT7P08729 469 aa12.53□□□□□ -0.4
CBWD3-208ENST00000612050 ADRB3P13945 408 aa12.53□□□□□ -0.4
CBWD3-208ENST00000612050 NFKBIAP25963 317 aa12.53□□□□□ -0.4
CBWD3-208ENST00000612050 MAT2AP31153 395 aaKnown RBP12.53□□□□□ -0.4
CBWD3-208ENST00000612050 RENBPP51606 427 aa12.53□□□□□ -0.4
CBWD3-208ENST00000612050 RPS21P63220 83 aaKnown RBP12.53□□□□□ -0.4
CBWD3-208ENST00000612050 ZNF252P-AS1Q0IIN9 211 aa12.53□□□□□ -0.4
CBWD3-208ENST00000612050 SGCGQ13326 291 aa12.53□□□□□ -0.4
CBWD3-208ENST00000612050 RFTN1Q14699 578 aaPredicted RBP12.53□□□□□ -0.4
CBWD3-208ENST00000612050 DPYSL2Q16555 572 aa12.53□□□□□ -0.4
CBWD3-208ENST00000612050 SMTNL2Q2TAL5 461 aa12.53□□□□□ -0.4
CBWD3-208ENST00000612050 MYLK3Q32MK0 819 aa12.53□□□□□ -0.4
CBWD3-208ENST00000612050 HS1BP3Q53T59 392 aa12.53□□□□□ -0.4
CBWD3-208ENST00000612050 ZNF805Q5CZA5 627 aa12.53□□□□□ -0.4
CBWD3-208ENST00000612050 KCNT1Q5JUK3 1230 aa12.53□□□□□ -0.4
CBWD3-208ENST00000612050 SARM1Q6SZW1 724 aa12.53□□□□□ -0.4
CBWD3-208ENST00000612050 GDPD4Q6W3E5 623 aa12.53□□□□□ -0.4
CBWD3-208ENST00000612050 LEKR1Q6ZMV7 388 aa12.53□□□□□ -0.4
CBWD3-208ENST00000612050 IQCHQ86VS3 1027 aa12.53□□□□□ -0.4
CBWD3-208ENST00000612050 RHOT2Q8IXI1 618 aa12.53□□□□□ -0.4
CBWD3-208ENST00000612050 MFSD2AQ8NA29 543 aa12.53□□□□□ -0.4
CBWD3-208ENST00000612050 DEFB124Q8NES8 71 aa12.53□□□□□ -0.4
CBWD3-208ENST00000612050 FAM131CQ96AQ9 280 aa12.53□□□□□ -0.4
CBWD3-208ENST00000612050 SLC6A18Q96N87 628 aa12.53□□□□□ -0.4
CBWD3-208ENST00000612050 KCTD15Q96SI1 283 aaPredicted RBP12.53□□□□□ -0.4
CBWD3-208ENST00000612050 C1QTNF7Q9BXJ2 289 aa12.53□□□□□ -0.4
CBWD3-208ENST00000612050 MAGEB5Q9BZ81 275 aa12.53□□□□□ -0.4
CBWD3-208ENST00000612050 TRIM7Q9C029 511 aa12.53□□□□□ -0.4
CBWD3-208ENST00000612050 NHEJ1Q9H9Q4 299 aaPredicted RBP12.53□□□□□ -0.4
CBWD3-208ENST00000612050 RCOR3Q9P2K3 495 aaPredicted RBP12.53□□□□□ -0.4
CBWD3-208ENST00000612050 PCDHGB2Q9Y5G2 931 aa12.53□□□□□ -0.4
CBWD3-208ENST00000612050 WASF2Q9Y6W5 498 aa12.53□□□□□ -0.4
CBWD3-208ENST00000612050 PCDH15Q96QU1 1955 aa12.52□□□□□ -0.4
CBWD3-208ENST00000612050 NUMA1Q14980 2115 aa12.52□□□□□ -0.41
CBWD3-208ENST00000612050 A0A1W2PQU0 124 aa12.52□□□□□ -0.41
CBWD3-208ENST00000612050 MED19A0JLT2 244 aaPredicted RBP12.52□□□□□ -0.41
CBWD3-208ENST00000612050 PLK4O00444 970 aa12.52□□□□□ -0.41
CBWD3-208ENST00000612050 LATO43561 262 aa12.52□□□□□ -0.41
CBWD3-208ENST00000612050 TSPAN6O43657 245 aa12.52□□□□□ -0.41
CBWD3-208ENST00000612050 AP1G1O43747 822 aa12.52□□□□□ -0.41
CBWD3-208ENST00000612050 NEBLO76041 1014 aa12.52□□□□□ -0.41
CBWD3-208ENST00000612050 UGT2B4P06133 528 aa12.52□□□□□ -0.41
CBWD3-208ENST00000612050 TMEM253P0C7T8 217 aa12.52□□□□□ -0.41
CBWD3-208ENST00000612050 HNRNPA2B1P22626 353 aaKnown RBP12.52□□□□□ -0.41
CBWD3-208ENST00000612050 PAPOLAP51003 745 aaKnown RBP12.52□□□□□ -0.41
CBWD3-208ENST00000612050 SUOXP51687 545 aa12.52□□□□□ -0.41
CBWD3-208ENST00000612050 ADKP55263 362 aaKnown RBP12.52□□□□□ -0.41
CBWD3-208ENST00000612050 CDH6P55285 790 aa12.52□□□□□ -0.41
CBWD3-208ENST00000612050 KIF19Q2TAC6 998 aa12.52□□□□□ -0.41
CBWD3-208ENST00000612050 PIP5KL1Q5T9C9 394 aa12.52□□□□□ -0.41
CBWD3-208ENST00000612050 TTC7BQ86TV6 843 aa12.52□□□□□ -0.41
CBWD3-208ENST00000612050 HORMAD1Q86X24 394 aa12.52□□□□□ -0.41
CBWD3-208ENST00000612050 NAXDQ8IW45 347 aa12.52□□□□□ -0.41
CBWD3-208ENST00000612050 KCTD6Q8NC69 237 aa12.52□□□□□ -0.41
CBWD3-208ENST00000612050 OR6K2Q8NGY2 324 aa12.52□□□□□ -0.41
CBWD3-208ENST00000612050 C1orf216Q8TAB5 229 aa12.52□□□□□ -0.41
CBWD3-208ENST00000612050 ARRDC3Q96B67 414 aa12.52□□□□□ -0.41
CBWD3-208ENST00000612050 CELF6Q96J87 481 aaKnown RBP12.52□□□□□ -0.41
CBWD3-208ENST00000612050 PEBP4Q96S96 227 aa12.52□□□□□ -0.41
CBWD3-208ENST00000612050 CDC6Q99741 560 aa12.52□□□□□ -0.41
CBWD3-208ENST00000612050 LRRC19Q9H756 370 aa12.52□□□□□ -0.41
CBWD3-208ENST00000612050 SNX11Q9Y5W9 270 aa12.52□□□□□ -0.41
CBWD3-208ENST00000612050 GON4LQ3T8J9 2241 aa12.52□□□□□ -0.41
CBWD3-208ENST00000612050 PLXNA2O75051 1894 aa12.51□□□□□ -0.41
CBWD3-208ENST00000612050 GOLGA6L6A8MZA4 724 aa12.51□□□□□ -0.41
CBWD3-208ENST00000612050 PRAMEF11O60813 436 aa12.51□□□□□ -0.41
CBWD3-208ENST00000612050 PROSCO94903 275 aa12.51□□□□□ -0.41
CBWD3-208ENST00000612050 TRIM16O95361 564 aa12.51□□□□□ -0.41
CBWD3-208ENST00000612050 RARAP10276 462 aa12.51□□□□□ -0.41
CBWD3-208ENST00000612050 SERPINA4P29622 427 aa12.51□□□□□ -0.41
CBWD3-208ENST00000612050 GJC1P36383 396 aa12.51□□□□□ -0.41
CBWD3-208ENST00000612050 METAP1P53582 386 aa12.51□□□□□ -0.41
CBWD3-208ENST00000612050 PPP2CBP62714 309 aa12.51□□□□□ -0.41
CBWD3-208ENST00000612050 PPP2CAP67775 309 aa12.51□□□□□ -0.41
CBWD3-208ENST00000612050 IL10RBQ08334 325 aa12.51□□□□□ -0.41
CBWD3-208ENST00000612050 ELP6Q0PNE2 266 aa12.51□□□□□ -0.41
CBWD3-208ENST00000612050 ZNF235Q14590 738 aa12.51□□□□□ -0.41
CBWD3-208ENST00000612050 PDK2Q15119 407 aa12.51□□□□□ -0.41
CBWD3-208ENST00000612050 SPA17Q15506 151 aa12.51□□□□□ -0.41
CBWD3-208ENST00000612050 CA9Q16790 459 aa12.51□□□□□ -0.41
CBWD3-208ENST00000612050 ERAP2Q6P179 960 aa12.51□□□□□ -0.41
CBWD3-208ENST00000612050 ATPAF2Q8N5M1 289 aa12.51□□□□□ -0.41
CBWD3-208ENST00000612050 OR2I1PQ8NGU4 316 aa12.51□□□□□ -0.41
CBWD3-208ENST00000612050 KLHDC7BQ96G42 594 aa12.51□□□□□ -0.41
CBWD3-208ENST00000612050 BTBD6Q96KE9 485 aa12.51□□□□□ -0.41
CBWD3-208ENST00000612050 KLHL32Q96NJ5 620 aa12.51□□□□□ -0.41
CBWD3-208ENST00000612050 TUBGCP5Q96RT8 1024 aa12.51□□□□□ -0.41
CBWD3-208ENST00000612050 CALN1Q9BXU9 219 aa12.51□□□□□ -0.41
CBWD3-208ENST00000612050 SLC39A8Q9C0K1 460 aa12.51□□□□□ -0.41
CBWD3-208ENST00000612050 ATP13A3Q9H7F0 1226 aa12.51□□□□□ -0.41
CBWD3-208ENST00000612050 CWC15Q9P013 229 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms