RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 ATP6AP2O75787 350 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 ALDH2P05091 517 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 ANPEPP15144 967 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 PAX7P23759 505 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 ZNF177Q13360 481 aaPredicted RBP6.45□□□□□ -1.38
SNX13-213ENST00000611725 OLIG2Q13516 323 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 RAP1GAP2Q684P5 730 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 HPS6Q86YV9 775 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 DENND6AQ8IWF6 608 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 RCN3Q96D15 328 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 ASIC4Q96FT7 647 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 CINPQ9BW66 212 aaPredicted RBP6.45□□□□□ -1.38
SNX13-213ENST00000611725 RHOBTB2Q9BYZ6 727 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 AGO3Q9H9G7 860 aaKnown RBP6.45□□□□□ -1.38
SNX13-213ENST00000611725 SNX13Q9Y5W8 968 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 C2orf81A6NN90 581 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 SEPT4O43236 478 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 TLR5O60602 858 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 TSPAN3O60637 253 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 CRTAMO95727 393 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 IL1BP01584 269 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 PIK3R1P27986 724 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 HTR7P34969 479 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 MRPS22P82650 360 aaKnown RBP6.45□□□□□ -1.38
SNX13-213ENST00000611725 FRA10AC1Q70Z53 315 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 SLC24A5Q71RS6 500 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 PCDH20Q8N6Y1 951 aaKnown RBP6.45□□□□□ -1.38
SNX13-213ENST00000611725 ZNF781Q8N8C0 355 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 SKA1Q96BD8 255 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 SLC2A13Q96QE2 648 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 NDNQ99608 321 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 FTHL17Q9BXU8 183 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 SLC25A51Q9H1U9 297 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.45□□□□□ -1.382e-7■■□□□ 13.4
SNX13-213ENST00000611725 THEGQ9P2T0 379 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 NKX1-2Q9UD57 310 aaPredicted RBP6.45□□□□□ -1.38
SNX13-213ENST00000611725 RREB1Q92766 1687 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 RGSL1A5PLK6 1076 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 CEP290O15078 2479 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 PIRTP0C851 137 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 RHOQP17081 205 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 IL10P22301 178 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 ALDH7A1P49419 539 aaKnown RBP6.45□□□□□ -1.38
SNX13-213ENST00000611725 SCAPQ12770 1279 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 NOMO2Q5JPE7 1267 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 UBXN11Q5T124 520 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 STXBP5Q5T5C0 1151 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 AGMOQ6ZNB7 445 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 PTGR2Q8N8N7 351 aaPredicted RBP6.45□□□□□ -1.38
SNX13-213ENST00000611725 SMG8Q8ND04 991 aaKnown RBP6.45□□□□□ -1.38
SNX13-213ENST00000611725 GDPD5Q8WTR4 605 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 SEPT8Q92599 483 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 HDAC10Q969S8 669 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 PRR11Q96HE9 360 aaPredicted RBP6.45□□□□□ -1.38
SNX13-213ENST00000611725 TMEM169Q96HH4 297 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 OSBPL2Q9H1P3 480 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 ACSS2Q9NR19 701 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 TLR8Q9NR97 1041 aaKnown RBP6.45□□□□□ -1.38
SNX13-213ENST00000611725 OLA1Q9NTK5 396 aaKnown RBP6.45□□□□□ -1.38
SNX13-213ENST00000611725 SEPT3Q9UH03 358 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 CRYL1Q9Y2S2 319 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 MYH15Q9Y2K3 1946 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 AKAP10O43572 662 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 ZNF623O75123 536 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 CAPN15O75808 1086 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 NMBRP28336 390 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 CCNG1P51959 295 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 KPNA1P52294 538 aaPredicted RBP6.45□□□□□ -1.38
SNX13-213ENST00000611725 YBEYP58557 167 aaPredicted RBP6.45□□□□□ -1.38
SNX13-213ENST00000611725 PURAQ00577 322 aaKnown RBP6.45□□□□□ -1.38
SNX13-213ENST00000611725 SATB1Q01826 763 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 RAD51Q06609 339 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 ILF2Q12905 390 aaKnown RBP6.45□□□□□ -1.38
SNX13-213ENST00000611725 ZBTB17Q13105 803 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 CYTH1Q15438 398 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 PSMD5Q16401 504 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 AARS2Q5JTZ9 985 aaKnown RBP6.45□□□□□ -1.38
SNX13-213ENST00000611725 RETSATQ6NUM9 610 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 EFCAB3Q8N7B9 438 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 CNTD1Q8N815 330 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 UTP4Q969X6 686 aaKnown RBP6.45□□□□□ -1.38
SNX13-213ENST00000611725 CXCL16Q9H2A7 254 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 IL1RL2Q9HB29 575 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 RIC8BQ9NVN3 520 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 TAS2R13Q9NYV9 303 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 CCDC167Q9P0B6 97 aa6.45□□□□□ -1.38
SNX13-213ENST00000611725 SUPT3HB4E1H0 165 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 CCL22O00626 93 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 HOXA2O43364 376 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 SUPT3HO75486 399 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 UPP2O95045 317 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 RHOCP08134 193 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 TAF10Q12962 218 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 IRF5Q13568 498 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.44□□□□□ -1.38
SNX13-213ENST00000611725 TMCO4Q5TGY1 634 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 MBLAC2Q68D91 279 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 LPCAT1Q8NF37 534 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 SPPL2BQ8TCT7 592 aa6.44□□□□□ -1.38
SNX13-213ENST00000611725 PTCD2Q8WV60 388 aaKnown RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms