RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 HSPA1AP0DMV8 641 aaKnown RBP8.79□□□□□ -1
LIG4-204ENST00000611712 HSPA1BP0DMV9 641 aaKnown RBP8.79□□□□□ -1
LIG4-204ENST00000611712 IL4RP24394 825 aa8.79□□□□□ -1
LIG4-204ENST00000611712 PEX2P28328 305 aa8.79□□□□□ -1
LIG4-204ENST00000611712 OR1E1P30953 314 aa8.79□□□□□ -1
LIG4-204ENST00000611712 RAP1GDS1P52306 607 aa8.79□□□□□ -1
LIG4-204ENST00000611712 CHN2P52757 468 aa8.79□□□□□ -1
LIG4-204ENST00000611712 PSME3P61289 254 aa8.79□□□□□ -1
LIG4-204ENST00000611712 CDC16Q13042 620 aa8.79□□□□□ -1
LIG4-204ENST00000611712 ZNF460Q14592 562 aa8.79□□□□□ -1
LIG4-204ENST00000611712 LSM12Q3MHD2 195 aaKnown RBP8.79□□□□□ -1
LIG4-204ENST00000611712 SLC9B1Q4ZJI4 515 aa8.79□□□□□ -1
LIG4-204ENST00000611712 SDHAF4Q5VUM1 108 aa8.79□□□□□ -1
LIG4-204ENST00000611712 CTU1Q7Z7A3 348 aaKnown RBP8.79□□□□□ -1
LIG4-204ENST00000611712 TAC4Q86UU9 113 aa8.79□□□□□ -1
LIG4-204ENST00000611712 OSTM1Q86WC4 334 aa8.79□□□□□ -1
LIG4-204ENST00000611712 DENND6AQ8IWF6 608 aa8.79□□□□□ -1
LIG4-204ENST00000611712 DSELQ8IZU8 1212 aa8.79□□□□□ -1
LIG4-204ENST00000611712 CDC26Q8NHZ8 85 aa8.79□□□□□ -1
LIG4-204ENST00000611712 TSPAN18Q96SJ8 248 aa8.79□□□□□ -1
LIG4-204ENST00000611712 SLC25A23Q9BV35 468 aa8.79□□□□□ -1
LIG4-204ENST00000611712 CINPQ9BW66 212 aaPredicted RBP8.79□□□□□ -1
LIG4-204ENST00000611712 R3HDMLQ9H3Y0 253 aa8.79□□□□□ -1
LIG4-204ENST00000611712 HACD3Q9P035 362 aa8.79□□□□□ -1
LIG4-204ENST00000611712 CNTN3Q9P232 1028 aa8.79□□□□□ -1
LIG4-204ENST00000611712 SLC30A1Q9Y6M5 507 aa8.79□□□□□ -1
LIG4-204ENST00000611712 ADAMTSL1Q8N6G6 1762 aa8.78□□□□□ -1
LIG4-204ENST00000611712 SCN9AQ15858 1988 aa8.78□□□□□ -1
LIG4-204ENST00000611712 NRP1O14786 923 aa8.78□□□□□ -1
LIG4-204ENST00000611712 STX7O15400 261 aaKnown RBP8.78□□□□□ -1
LIG4-204ENST00000611712 UQCRBP14927 111 aa8.78□□□□□ -1
LIG4-204ENST00000611712 AOC1P19801 751 aa8.78□□□□□ -1
LIG4-204ENST00000611712 TKTP29401 623 aaKnown RBP8.78□□□□□ -1
LIG4-204ENST00000611712 HMOX2P30519 316 aa8.78□□□□□ -1
LIG4-204ENST00000611712 GMPRP36959 345 aa8.78□□□□□ -1
LIG4-204ENST00000611712 PLIN5Q00G26 463 aa8.78□□□□□ -1
LIG4-204ENST00000611712 FOLH1Q04609 750 aa8.78□□□□□ -1
LIG4-204ENST00000611712 RAD51Q06609 339 aa8.78□□□□□ -1
LIG4-204ENST00000611712 POLD3Q15054 466 aaPredicted RBP8.78□□□□□ -1
LIG4-204ENST00000611712 CCDC142Q17RM4 750 aa8.78□□□□□ -1
LIG4-204ENST00000611712 INTS6LQ5JSJ4 861 aaKnown RBP8.78□□□□□ -1
LIG4-204ENST00000611712 TRNP1Q6NT89 227 aa8.78□□□□□ -1
LIG4-204ENST00000611712 FSTL5Q8N475 847 aaPredicted RBP8.78□□□□□ -1
LIG4-204ENST00000611712 KLHL5Q96PQ7 755 aa8.78□□□□□ -1
LIG4-204ENST00000611712 TRAPPC9Q96Q05 1148 aa8.78□□□□□ -1
LIG4-204ENST00000611712 NPY6RQ99463 290 aa8.78□□□□□ -1
LIG4-204ENST00000611712 MUC3BQ9H195 1237 aa8.78□□□□□ -1
LIG4-204ENST00000611712 UTP6Q9NYH9 597 aaKnown RBP8.78□□□□□ -1
LIG4-204ENST00000611712 MOCS1Q9NZB8 636 aa8.78□□□□□ -1
LIG4-204ENST00000611712 PSMD13Q9UNM6 376 aa8.78□□□□□ -1
LIG4-204ENST00000611712 KCNH4Q9UQ05 1017 aa8.78□□□□□ -1
LIG4-204ENST00000611712 ORC6Q9Y5N6 252 aa8.78□□□□□ -1
LIG4-204ENST00000611712 MYO18AQ92614 2054 aaKnown RBP8.78□□□□□ -1
LIG4-204ENST00000611712 SAC3D1A6NKF1 404 aa8.78□□□□□ -1
LIG4-204ENST00000611712 F5H5T6 163 aa8.78□□□□□ -1
LIG4-204ENST00000611712 AHCYL1O43865 530 aa8.78□□□□□ -1
LIG4-204ENST00000611712 FAM189A1O60320 539 aa8.78□□□□□ -1
LIG4-204ENST00000611712 SERPINF2P08697 491 aa8.78□□□□□ -1
LIG4-204ENST00000611712 FGFR3P22607 806 aa8.78□□□□□ -1
LIG4-204ENST00000611712 PSMA4P25789 261 aaKnown RBP8.78□□□□□ -1
LIG4-204ENST00000611712 RPL9P32969 192 aaKnown RBP8.78□□□□□ -1
LIG4-204ENST00000611712 CCNFP41002 786 aa8.78□□□□□ -1
LIG4-204ENST00000611712 SCNN1BP51168 640 aa8.78□□□□□ -1
LIG4-204ENST00000611712 POU4F1Q01851 419 aa8.78□□□□□ -1
LIG4-204ENST00000611712 MSLNQ13421 630 aaPredicted RBP8.78□□□□□ -1
LIG4-204ENST00000611712 TSTA3Q13630 321 aaPredicted RBP8.78□□□□□ -1
LIG4-204ENST00000611712 PCLAFQ15004 111 aa8.78□□□□□ -1
LIG4-204ENST00000611712 TAPT1Q6NXT6 567 aa8.78□□□□□ -1
LIG4-204ENST00000611712 TLDC1Q6P9B6 456 aa8.78□□□□□ -1
LIG4-204ENST00000611712 TTC33Q6PID6 262 aaPredicted RBP8.78□□□□□ -1
LIG4-204ENST00000611712 DHFR2Q86XF0 187 aa8.78□□□□□ -1
LIG4-204ENST00000611712 ZNF786Q8N393 782 aa8.78□□□□□ -1
LIG4-204ENST00000611712 PHTF2Q8N3S3 785 aa8.78□□□□□ -1
LIG4-204ENST00000611712 DDI1Q8WTU0 396 aa8.78□□□□□ -1
LIG4-204ENST00000611712 DLG3Q92796 817 aa8.78□□□□□ -1
LIG4-204ENST00000611712 NRBF2Q96F24 287 aa8.78□□□□□ -1
LIG4-204ENST00000611712 TMEM79Q9BSE2 394 aa8.78□□□□□ -1
LIG4-204ENST00000611712 FBXO44Q9H4M3 255 aa8.78□□□□□ -1
LIG4-204ENST00000611712 C6orf203Q9P0P8 240 aaPredicted RBP8.78□□□□□ -1
LIG4-204ENST00000611712 WARS2Q9UGM6 360 aaKnown RBP8.78□□□□□ -1
LIG4-204ENST00000611712 SPTLC1O15269 473 aa8.78□□□□□ -1
LIG4-204ENST00000611712 BAIAP3O94812 1187 aa8.78□□□□□ -1
LIG4-204ENST00000611712 SNUPNO95149 360 aaKnown RBP8.78□□□□□ -1
LIG4-204ENST00000611712 TNFAIP8O95379 198 aa8.78□□□□□ -1
LIG4-204ENST00000611712 PFKMP08237 780 aa8.78□□□□□ -1
LIG4-204ENST00000611712 FGF3P11487 239 aaPredicted RBP8.78□□□□□ -1
LIG4-204ENST00000611712 VCLP18206 1134 aa8.78□□□□□ -1
LIG4-204ENST00000611712 CD52P31358 61 aa8.78□□□□□ -1
LIG4-204ENST00000611712 HARS2P49590 506 aaKnown RBP8.78□□□□□ -1
LIG4-204ENST00000611712 RAB27AP51159 221 aa8.78□□□□□ -1
LIG4-204ENST00000611712 CDH13P55290 713 aa8.78□□□□□ -1
LIG4-204ENST00000611712 PPIDQ08752 370 aaKnown RBP8.78□□□□□ -1
LIG4-204ENST00000611712 NFYCQ13952 458 aa8.78□□□□□ -1
LIG4-204ENST00000611712 FAM110CQ1W6H9 321 aa8.78□□□□□ -1
LIG4-204ENST00000611712 ZYG11AQ6WRX3 759 aa8.78□□□□□ -1
LIG4-204ENST00000611712 OR52K2Q8NGK3 314 aa8.78□□□□□ -1
LIG4-204ENST00000611712 RTP4Q96DX8 246 aa8.78□□□□□ -1
LIG4-204ENST00000611712 SYTL2Q9HCH5 934 aa8.78□□□□□ -1
LIG4-204ENST00000611712 GDAP2Q9NXN4 497 aa8.78□□□□□ -1
LIG4-204ENST00000611712 CLIC5Q9NZA1 410 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms