RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 SCN5AQ14524 2016 aa13.79□□□□□ -0.2
NEK3-205ENST00000610828 SLC38A8A6NNN8 435 aa13.79□□□□□ -0.2
NEK3-205ENST00000610828 G3V2L1 256 aa13.79□□□□□ -0.2
NEK3-205ENST00000610828 GYG2O15488 501 aa13.79□□□□□ -0.2
NEK3-205ENST00000610828 ADAM12O43184 909 aa13.79□□□□□ -0.2
NEK3-205ENST00000610828 RPL17P18621 184 aaKnown RBP13.79□□□□□ -0.2
NEK3-205ENST00000610828 SLC1A2P43004 574 aa13.79□□□□□ -0.2
NEK3-205ENST00000610828 KCNQ1P51787 676 aa13.79□□□□□ -0.2
NEK3-205ENST00000610828 ATN1P54259 1190 aaPredicted RBP13.79□□□□□ -0.2
NEK3-205ENST00000610828 ARHGEF6Q15052 776 aa13.79□□□□□ -0.2
NEK3-205ENST00000610828 ZNF470Q6ECI4 717 aa13.79□□□□□ -0.2
NEK3-205ENST00000610828 SLC41A1Q8IVJ1 513 aa13.79□□□□□ -0.2
NEK3-205ENST00000610828 MYEOVQ96EZ4 313 aa13.79□□□□□ -0.2
NEK3-205ENST00000610828 TSNARE1Q96NA8 513 aa13.79□□□□□ -0.2
NEK3-205ENST00000610828 SIKE1Q9BRV8 207 aa13.79□□□□□ -0.2
NEK3-205ENST00000610828 TREX1Q9NSU2 369 aa13.79□□□□□ -0.2
NEK3-205ENST00000610828 PNPOQ9NVS9 261 aa13.79□□□□□ -0.2
NEK3-205ENST00000610828 TRIM17Q9Y577 477 aa13.79□□□□□ -0.2
NEK3-205ENST00000610828 MIA3Q5JRA6 1907 aa13.79□□□□□ -0.2
NEK3-205ENST00000610828 FNDC1Q4ZHG4 1894 aaPredicted RBP13.78□□□□□ -0.2
NEK3-205ENST00000610828 DRGXA6NNA5 263 aa13.78□□□□□ -0.2
NEK3-205ENST00000610828 ENO1P06733 434 aaKnown RBP13.78□□□□□ -0.2
NEK3-205ENST00000610828 ALDH7A1P49419 539 aaKnown RBP13.78□□□□□ -0.2
NEK3-205ENST00000610828 SERPINH1P50454 418 aaKnown RBP13.78□□□□□ -0.2
NEK3-205ENST00000610828 GTF2A1P52655 376 aaPredicted RBP13.78□□□□□ -0.2
NEK3-205ENST00000610828 RING1Q06587 406 aa13.78□□□□□ -0.2
NEK3-205ENST00000610828 RCN2Q14257 317 aa13.78□□□□□ -0.2
NEK3-205ENST00000610828 ZNF460Q14592 562 aa13.78□□□□□ -0.2
NEK3-205ENST00000610828 FAM91A1Q658Y4 838 aa13.78□□□□□ -0.2
NEK3-205ENST00000610828 NADSYN1Q6IA69 706 aa13.78□□□□□ -0.2
NEK3-205ENST00000610828 DEFB128Q7Z7B8 93 aa13.78□□□□□ -0.2
NEK3-205ENST00000610828 LRRC43Q8N309 656 aa13.78□□□□□ -0.2
NEK3-205ENST00000610828 C2orf15Q8WU43 125 aaKnown RBP13.78□□□□□ -0.2
NEK3-205ENST00000610828 SREK1Q8WXA9 508 aaKnown RBP13.78□□□□□ -0.2
NEK3-205ENST00000610828 CADM1Q9BY67 442 aaKnown RBP13.78□□□□□ -0.2
NEK3-205ENST00000610828 SEZ6LQ9BYH1 1024 aa13.78□□□□□ -0.2
NEK3-205ENST00000610828 PPP1R12CQ9BZL4 782 aa13.78□□□□□ -0.2
NEK3-205ENST00000610828 PRKD2Q9BZL6 878 aa13.78□□□□□ -0.2
NEK3-205ENST00000610828 UBE2OQ9C0C9 1292 aaKnown RBP13.78□□□□□ -0.2
NEK3-205ENST00000610828 NACA2Q9H009 215 aa13.78□□□□□ -0.2
NEK3-205ENST00000610828 VPS45Q9NRW7 570 aa13.78□□□□□ -0.2
NEK3-205ENST00000610828 ZNF212Q9UDV6 495 aa13.78□□□□□ -0.2
NEK3-205ENST00000610828 HEATR9A2RTY3 570 aa13.78□□□□□ -0.2
NEK3-205ENST00000610828 CAPN14A8MX76 684 aa13.78□□□□□ -0.2
NEK3-205ENST00000610828 TK2O00142 265 aa13.78□□□□□ -0.2
NEK3-205ENST00000610828 ZDHHC11BP0C7U3 371 aa13.78□□□□□ -0.2
NEK3-205ENST00000610828 SLC35E2BP0CK96 405 aa13.78□□□□□ -0.2
NEK3-205ENST00000610828 ACVRL1P37023 503 aa13.78□□□□□ -0.2
NEK3-205ENST00000610828 CPA2P48052 419 aa13.78□□□□□ -0.2
NEK3-205ENST00000610828 GLRBP48167 497 aa13.78□□□□□ -0.2
NEK3-205ENST00000610828 SLC12A1Q13621 1099 aa13.78□□□□□ -0.2
NEK3-205ENST00000610828 PARP15Q460N3 678 aa13.78□□□□□ -0.2
NEK3-205ENST00000610828 KIAA0930Q6ICG6 404 aaPredicted RBP13.78□□□□□ -0.2
NEK3-205ENST00000610828 RINLQ6ZS11 566 aa13.78□□□□□ -0.2
NEK3-205ENST00000610828 TREML1Q86YW5 311 aa13.78□□□□□ -0.2
NEK3-205ENST00000610828 CFAP52Q8N1V2 620 aa13.78□□□□□ -0.2
NEK3-205ENST00000610828 FATE1Q969F0 183 aa13.78□□□□□ -0.2
NEK3-205ENST00000610828 DEFB118Q96PH6 123 aa13.78□□□□□ -0.2
NEK3-205ENST00000610828 HIPK3Q9H422 1215 aa13.78□□□□□ -0.2
NEK3-205ENST00000610828 TLE6Q9H808 572 aa13.78□□□□□ -0.2
NEK3-205ENST00000610828 ARNT2Q9HBZ2 717 aa13.78□□□□□ -0.2
NEK3-205ENST00000610828 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.78□□□□□ -0.2
NEK3-205ENST00000610828 COMMD8Q9NX08 183 aa13.78□□□□□ -0.2
NEK3-205ENST00000610828 ANKRD6Q9Y2G4 727 aa13.78□□□□□ -0.2
NEK3-205ENST00000610828 FAM95CA0A1B0GW59 222 aa13.77□□□□□ -0.21
NEK3-205ENST00000610828 TRIM13O60858 407 aa13.77□□□□□ -0.21
NEK3-205ENST00000610828 SERPINA6P08185 405 aa13.77□□□□□ -0.21
NEK3-205ENST00000610828 MMP2P08253 660 aa13.77□□□□□ -0.21
NEK3-205ENST00000610828 TACR2P21452 398 aa13.77□□□□□ -0.21
NEK3-205ENST00000610828 CCND1P24385 295 aa13.77□□□□□ -0.21
NEK3-205ENST00000610828 OR1D2P34982 312 aa13.77□□□□□ -0.21
NEK3-205ENST00000610828 HARS2P49590 506 aaKnown RBP13.77□□□□□ -0.21
NEK3-205ENST00000610828 CSRP3P50461 194 aa13.77□□□□□ -0.21
NEK3-205ENST00000610828 IL10RBQ08334 325 aa13.77□□□□□ -0.21
NEK3-205ENST00000610828 SERINC3Q13530 473 aa13.77□□□□□ -0.21
NEK3-205ENST00000610828 RFWD3Q6PCD5 774 aa13.77□□□□□ -0.21
NEK3-205ENST00000610828 NAPRTQ6XQN6 538 aa13.77□□□□□ -0.21
NEK3-205ENST00000610828 LGI2Q8N0V4 545 aa13.77□□□□□ -0.21
NEK3-205ENST00000610828 GPATCH11Q8N954 259 aa13.77□□□□□ -0.21
NEK3-205ENST00000610828 KCTD4Q8WVF5 259 aa13.77□□□□□ -0.21
NEK3-205ENST00000610828 SCYL1Q96KG9 808 aa13.77□□□□□ -0.21
NEK3-205ENST00000610828 ZNF512Q96ME7 567 aaPredicted RBP13.77□□□□□ -0.21
NEK3-205ENST00000610828 C1QTNF1Q9BXJ1 281 aa13.77□□□□□ -0.21
NEK3-205ENST00000610828 OXCT2Q9BYC2 517 aaPredicted RBP13.77□□□□□ -0.21
NEK3-205ENST00000610828 ACE2Q9BYF1 805 aaPredicted RBP13.77□□□□□ -0.21
NEK3-205ENST00000610828 TAS2R1Q9NYW7 299 aa13.77□□□□□ -0.21
NEK3-205ENST00000610828 UXTQ9UBK9 157 aaPredicted RBP13.77□□□□□ -0.21
NEK3-205ENST00000610828 RUVBL2Q9Y230 463 aaKnown RBP13.77□□□□□ -0.21
NEK3-205ENST00000610828 APOBEC2Q9Y235 224 aaKnown RBP13.77□□□□□ -0.21
NEK3-205ENST00000610828 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.77□□□□□ -0.21
NEK3-205ENST00000610828 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.76□□□□□ -0.21
NEK3-205ENST00000610828 F5H5T6 163 aa13.76□□□□□ -0.21
NEK3-205ENST00000610828 HSPA4LO95757 839 aa13.76□□□□□ -0.21
NEK3-205ENST00000610828 STMN1P16949 149 aa13.76□□□□□ -0.21
NEK3-205ENST00000610828 MAP2K2P36507 400 aa13.76□□□□□ -0.21
NEK3-205ENST00000610828 KPNA1P52294 538 aaPredicted RBP13.76□□□□□ -0.21
NEK3-205ENST00000610828 RAB10P61026 200 aa13.76□□□□□ -0.21
NEK3-205ENST00000610828 KDSRQ06136 332 aa13.76□□□□□ -0.21
NEK3-205ENST00000610828 UBAP2LQ14157 1087 aaKnown RBP13.76□□□□□ -0.21
NEK3-205ENST00000610828 IHHQ14623 411 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms