RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 PSMG2Q969U7 264 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 OXNAD1Q96HP4 312 aaPredicted RBP7.36□□□□□ -1.23
CSDE1-218ENST00000610726 SLC9A7Q96T83 725 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 ECSITQ9BQ95 431 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 ACE2Q9BYF1 805 aaPredicted RBP7.36□□□□□ -1.23
CSDE1-218ENST00000610726 ATP13A3Q9H7F0 1226 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 TLE6Q9H808 572 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 SNX15Q9NRS6 342 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 GDAP2Q9NXN4 497 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 MSRAQ9UJ68 235 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 ZMYM5Q9UJ78 669 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 PCDHGC4Q9Y5F7 938 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 CPQQ9Y646 472 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 MAP1BP46821 2468 aaKnown RBP7.36□□□□□ -1.23
CSDE1-218ENST00000610726 FANCGO15287 622 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 EFCAB14O75071 495 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 SEC24DO94855 1032 aaPredicted RBP7.36□□□□□ -1.23
CSDE1-218ENST00000610726 TMEM63AO94886 807 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 METTL18O95568 372 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 CREB1P16220 341 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 CDC25CP30307 473 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 HOXA11P31270 313 aaPredicted RBP7.36□□□□□ -1.23
CSDE1-218ENST00000610726 IFNA8P32881 189 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 GPR15P49685 360 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 CDK7P50613 346 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 APLP1P51693 650 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 CCNG1P51959 295 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 INCA1Q0VD86 236 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 CAMK2GQ13555 558 aaPredicted RBP7.36□□□□□ -1.23
CSDE1-218ENST00000610726 INPP5AQ14642 412 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 DPYSL2Q16555 572 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 HIST2H2ACQ16777 129 aaPredicted RBP7.36□□□□□ -1.23
CSDE1-218ENST00000610726 HIST2H2AA3Q6FI13 130 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 PKN3Q6P5Z2 889 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 LRRC8BQ6P9F7 803 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 LDB1Q86U70 411 aaPredicted RBP7.36□□□□□ -1.23
CSDE1-218ENST00000610726 TRAPPC5Q8IUR0 188 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 TRIM48Q8IWZ4 208 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 TBC1D19Q8N5T2 526 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 PIWIL2Q8TC59 973 aaKnown RBP7.36□□□□□ -1.23
CSDE1-218ENST00000610726 MED8Q96G25 268 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 FUBP3Q96I24 572 aaKnown RBP eCLIP7.36□□□□□ -1.23
CSDE1-218ENST00000610726 SMOQ99835 787 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 PAAF1Q9BRP4 392 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 C17orf80Q9BSJ5 609 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 STRA6Q9BX79 667 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 ADAMTS10Q9H324 1103 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 PIF1Q9H611 641 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 SLC28A3Q9HAS3 691 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 NOD2Q9HC29 1040 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 SEMA4BQ9NPR2 832 aaPredicted RBP7.36□□□□□ -1.23
CSDE1-218ENST00000610726 MRGBPQ9NV56 204 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 EIF3LQ9Y262 564 aaKnown RBP7.36□□□□□ -1.23
CSDE1-218ENST00000610726 TLL2Q9Y6L7 1015 aa7.36□□□□□ -1.23
CSDE1-218ENST00000610726 AGPSO00116 658 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 IRAK2O43187 625 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 STAU1O95793 577 aaKnown RBP7.35□□□□□ -1.23
CSDE1-218ENST00000610726 GNRH1P01148 92 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 IL1BP01584 269 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 C2P06681 752 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 KRT16P08779 473 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 SYN1P17600 705 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 LPOP22079 712 aaPredicted RBP7.35□□□□□ -1.23
CSDE1-218ENST00000610726 PTPN3P26045 913 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 POLE2P56282 527 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 RPS24P62847 133 aaKnown RBP7.35□□□□□ -1.23
CSDE1-218ENST00000610726 PHEXP78562 749 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 CREMQ03060 361 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 SETMARQ53H47 684 aaPredicted RBP7.35□□□□□ -1.23
CSDE1-218ENST00000610726 NIPA2Q8N8Q9 360 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 SLC35B2Q8TB61 432 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 ING5Q8WYH8 240 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 HMCESQ96FZ2 354 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 HTATIP2Q9BUP3 242 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 CCDC90BQ9GZT6 254 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 ABCG8Q9H221 673 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 CRTAC1Q9NQ79 661 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 FLRT1Q9NZU1 646 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 CCDC167Q9P0B6 97 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 XPR1Q9UBH6 696 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 TAGLN3Q9UI15 199 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 TJP1Q07157 1748 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 C5orf60A6NFR6 353 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 SLC38A8A6NNN8 435 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 EVPLLA8MZ36 301 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 PIRO00625 290 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 RAD51BO15315 384 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 C8AP07357 584 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 LTA4HP09960 611 aaKnown RBP7.35□□□□□ -1.23
CSDE1-218ENST00000610726 OR56A5P0C7T3 313 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 ACADMP11310 421 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 EPB42P16452 691 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 TSHRP16473 764 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 TPSB2P20231 275 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 GRIA1P42261 906 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 SGCGQ13326 291 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 RCN1Q15293 331 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 CYTH1Q15438 398 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 TPSAB1Q15661 275 aa7.35□□□□□ -1.23
CSDE1-218ENST00000610726 PDK4Q16654 411 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms