RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 PTPN5P54829 565 aa13.2□□□□□ -0.3
USP6NL-205ENST00000609104 MYBPC1Q00872 1141 aa13.2□□□□□ -0.3
USP6NL-205ENST00000609104 ELMO1Q92556 727 aa13.2□□□□□ -0.3
USP6NL-205ENST00000609104 TRIT1Q9H3H1 467 aaKnown RBP13.2□□□□□ -0.3
USP6NL-205ENST00000609104 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.2□□□□□ -0.3
USP6NL-205ENST00000609104 GPC6Q9Y625 555 aaPredicted RBP13.2□□□□□ -0.3
USP6NL-205ENST00000609104 MARSP56192 900 aaKnown RBP13.2□□□□□ -0.3
USP6NL-205ENST00000609104 SLC45A4Q5BKX6 768 aa13.2□□□□□ -0.3
USP6NL-205ENST00000609104 UNC5AQ6ZN44 842 aa13.2□□□□□ -0.3
USP6NL-205ENST00000609104 TPGS1Q6ZTW0 290 aa13.2□□□□□ -0.3
USP6NL-205ENST00000609104 HPS6Q86YV9 775 aa13.2□□□□□ -0.3
USP6NL-205ENST00000609104 FBXW8Q8N3Y1 598 aa13.2□□□□□ -0.3
USP6NL-205ENST00000609104 INSRRP14616 1297 aa13.2□□□□□ -0.3
USP6NL-205ENST00000609104 PDGFDQ9GZP0 370 aaPredicted RBP13.2□□□□□ -0.3
USP6NL-205ENST00000609104 KANSL3Q9P2N6 904 aa13.2□□□□□ -0.3
USP6NL-205ENST00000609104 GNPTGQ9UJJ9 305 aa13.2□□□□□ -0.3
USP6NL-205ENST00000609104 BTRCQ9Y297 605 aa13.2□□□□□ -0.3
USP6NL-205ENST00000609104 VIL1P09327 827 aaKnown RBP13.2□□□□□ -0.3
USP6NL-205ENST00000609104 CYP4B1P13584 511 aa13.2□□□□□ -0.3
USP6NL-205ENST00000609104 ETS2P15036 469 aa13.2□□□□□ -0.3
USP6NL-205ENST00000609104 RETSATQ6NUM9 610 aa13.2□□□□□ -0.3
USP6NL-205ENST00000609104 RNF19BQ6ZMZ0 732 aa13.2□□□□□ -0.3
USP6NL-205ENST00000609104 GIPC3Q8TF64 312 aa13.2□□□□□ -0.3
USP6NL-205ENST00000609104 GMCL1Q96IK5 515 aa13.2□□□□□ -0.3
USP6NL-205ENST00000609104 EGFL7Q9UHF1 273 aa13.2□□□□□ -0.3
USP6NL-205ENST00000609104 GUCY1B2O75343 617 aa13.2□□□□□ -0.3
USP6NL-205ENST00000609104 PIK3CGP48736 1102 aa13.2□□□□□ -0.3
USP6NL-205ENST00000609104 SCRN3Q0VDG4 424 aa13.2□□□□□ -0.3
USP6NL-205ENST00000609104 STK40Q8N2I9 435 aa13.2□□□□□ -0.3
USP6NL-205ENST00000609104 CYP2W1Q8TAV3 490 aa13.2□□□□□ -0.3
USP6NL-205ENST00000609104 DSN1Q9H410 356 aa13.2□□□□□ -0.3
USP6NL-205ENST00000609104 STARD7Q9NQZ5 370 aa13.2□□□□□ -0.3
USP6NL-205ENST00000609104 SLC26A3P40879 764 aa13.2□□□□□ -0.3
USP6NL-205ENST00000609104 ACLYP53396 1101 aa13.2□□□□□ -0.3
USP6NL-205ENST00000609104 ZNF483Q8TF39 744 aaPredicted RBP13.2□□□□□ -0.3
USP6NL-205ENST00000609104 TNPO3Q9Y5L0 923 aaKnown RBP13.2□□□□□ -0.3
USP6NL-205ENST00000609104 LTA4HP09960 611 aaKnown RBP13.2□□□□□ -0.3
USP6NL-205ENST00000609104 STXBP5Q5T5C0 1151 aa13.2□□□□□ -0.3
USP6NL-205ENST00000609104 OMDQ99983 421 aa13.2□□□□□ -0.3
USP6NL-205ENST00000609104 FUCA2Q9BTY2 467 aa13.2□□□□□ -0.3
USP6NL-205ENST00000609104 APOC4-APOC2K7ER74 178 aa13.2□□□□□ -0.3
USP6NL-205ENST00000609104 HAT1O14929 419 aa13.2□□□□□ -0.3
USP6NL-205ENST00000609104 KPNA6O60684 536 aa13.2□□□□□ -0.3
USP6NL-205ENST00000609104 KRT36O76013 467 aa13.2□□□□□ -0.3
USP6NL-205ENST00000609104 APOC2P02655 101 aa13.2□□□□□ -0.3
USP6NL-205ENST00000609104 INSCQ1MX18 579 aa13.2□□□□□ -0.3
USP6NL-205ENST00000609104 METTL7BQ6UX53 244 aa13.2□□□□□ -0.3
USP6NL-205ENST00000609104 OTOP1Q7RTM1 612 aa13.2□□□□□ -0.3
USP6NL-205ENST00000609104 BANF1O75531 89 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 NR2F1P10589 423 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 HSPA14Q0VDF9 509 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 KATNAL2Q8IYT4 538 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 RSL24D1Q9UHA3 163 aaKnown RBP13.19□□□□□ -0.3
USP6NL-205ENST00000609104 EFR3BQ9Y2G0 817 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 MYH11P35749 1972 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 NPR3P17342 541 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 POLR2EP19388 210 aaKnown RBP13.19□□□□□ -0.3
USP6NL-205ENST00000609104 RPL4P36578 427 aaKnown RBP13.19□□□□□ -0.3
USP6NL-205ENST00000609104 PREPLQ4J6C6 727 aaPredicted RBP13.19□□□□□ -0.3
USP6NL-205ENST00000609104 PSME2Q9UL46 239 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 CCDC162PA2VCL2 907 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 MGRN1O60291 552 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 IFNA16P05015 189 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 RARRES1P49788 294 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 RAPSNQ13702 412 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 SLC15A2Q16348 729 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 COX4I2Q96KJ9 171 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 ZDHHC15Q96MV8 337 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 NCKAP1Q9Y2A7 1128 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 PIAS1O75925 651 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 RFX5P48382 616 aaPredicted RBP13.19□□□□□ -0.3
USP6NL-205ENST00000609104 MTA1Q13330 715 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 ALG11Q2TAA5 492 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 RBM43Q6ZSC3 357 aaKnown RBP13.19□□□□□ -0.3
USP6NL-205ENST00000609104 ALYREFQ86V81 257 aaKnown RBP13.19□□□□□ -0.3
USP6NL-205ENST00000609104 SPATA6LQ8N4H0 392 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 GMCL1P1Q8NEA9 526 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 HPS1Q92902 700 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 ZHX1-C8orf76Q96EF9 292 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 ASB8Q9H765 288 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 OR10H2O60403 315 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 SNX3O60493 162 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 LINC00032P0C843 101 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 RPS12P25398 132 aaKnown RBP13.19□□□□□ -0.3
USP6NL-205ENST00000609104 LRRC17Q8N6Y2 441 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 PIGKQ92643 395 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 VPS4AQ9UN37 437 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 SLC12A4Q9UP95 1085 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 ANKRD12Q6UB98 2062 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 SNAP91O60641 907 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 PRKAR1AP10644 381 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 BMP7P18075 431 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 CDH3P22223 829 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 IL12AP29459 219 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 SRSF11Q05519 484 aaKnown RBP13.19□□□□□ -0.3
USP6NL-205ENST00000609104 SLC47A1Q96FL8 570 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 SLITRK3O94933 977 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 MLYCDO95822 493 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 NFIAQ12857 509 aa13.19□□□□□ -0.3
USP6NL-205ENST00000609104 CYP2A13Q16696 494 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms