RNA–Protein interactions for RNA: ENST00000607805.5

NECAB3-222, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 969 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-222	ENST00000607805	ZSCAN30	Q86W11	494 aa		21.41	■■□□□ 1.02
NECAB3-222	ENST00000607805	PARG	Q86W56	976 aa		21.41	■■□□□ 1.02
NECAB3-222	ENST00000607805	IFI44	Q8TCB0	444 aa		21.41	■■□□□ 1.02
NECAB3-222	ENST00000607805	SNRNP27	Q8WVK2	155 aa	Known RBP	21.41	■■□□□ 1.02
NECAB3-222	ENST00000607805	ASB12	Q8WXK4	309 aa		21.41	■■□□□ 1.02
NECAB3-222	ENST00000607805	ISG20	Q96AZ6	181 aa	Known RBP	21.41	■■□□□ 1.02
NECAB3-222	ENST00000607805	WBP1	Q96G27	269 aa		21.41	■■□□□ 1.02
NECAB3-222	ENST00000607805	ATP13A1	Q9HD20	1204 aa		21.41	■■□□□ 1.02
NECAB3-222	ENST00000607805	PPARGC1A	Q9UBK2	798 aa	Known RBP	21.41	■■□□□ 1.02
NECAB3-222	ENST00000607805	ACTL7A	Q9Y615	435 aa		21.41	■■□□□ 1.02
NECAB3-222	ENST00000607805	SRGAP2	O75044	1071 aa		21.4	■■□□□ 1.02
NECAB3-222	ENST00000607805	TGM2	P21980	687 aa		21.4	■■□□□ 1.02
NECAB3-222	ENST00000607805	RABIF	P47224	123 aa		21.4	■■□□□ 1.02
NECAB3-222	ENST00000607805	SKOR1	P84550	965 aa		21.4	■■□□□ 1.02
NECAB3-222	ENST00000607805	GNA12	Q03113	381 aa		21.4	■■□□□ 1.02
NECAB3-222	ENST00000607805	MAPK8IP2	Q13387	824 aa	Predicted RBP	21.4	■■□□□ 1.02
NECAB3-222	ENST00000607805	ISX	Q2M1V0	245 aa		21.4	■■□□□ 1.02
NECAB3-222	ENST00000607805	CREBRF	Q8IUR6	639 aa		21.4	■■□□□ 1.02
NECAB3-222	ENST00000607805	SPON2	Q9BUD6	331 aa		21.4	■■□□□ 1.02
NECAB3-222	ENST00000607805	ZYG11B	Q9C0D3	744 aa		21.4	■■□□□ 1.02
NECAB3-222	ENST00000607805	FCF1	Q9Y324	198 aa	Known RBP	21.4	■■□□□ 1.02
NECAB3-222	ENST00000607805	EME2	A4GXA9	379 aa	Predicted RBP	21.39	■■□□□ 1.01
NECAB3-222	ENST00000607805	RIOK3	O14730	519 aa	Known RBP	21.39	■■□□□ 1.01
NECAB3-222	ENST00000607805	CYP11B1	P15538	503 aa		21.39	■■□□□ 1.01
NECAB3-222	ENST00000607805	ABL2	P42684	1182 aa		21.39	■■□□□ 1.01
NECAB3-222	ENST00000607805	UCN	P55089	124 aa		21.39	■■□□□ 1.01
NECAB3-222	ENST00000607805	PFN3	P60673	137 aa		21.39	■■□□□ 1.01
NECAB3-222	ENST00000607805	CFHR1	Q03591	330 aa		21.39	■■□□□ 1.01
NECAB3-222	ENST00000607805	EIF2B5	Q13144	721 aa	Known RBP	21.39	■■□□□ 1.01
NECAB3-222	ENST00000607805	MAN2A1	Q16706	1144 aa		21.39	■■□□□ 1.01
NECAB3-222	ENST00000607805	MIIP	Q5JXC2	388 aa		21.39	■■□□□ 1.01
NECAB3-222	ENST00000607805	MANEAL	Q5VSG8	457 aa		21.39	■■□□□ 1.01
NECAB3-222	ENST00000607805	MAPK15	Q8TD08	544 aa		21.39	■■□□□ 1.01
NECAB3-222	ENST00000607805	PRR11	Q96HE9	360 aa	Predicted RBP	21.39	■■□□□ 1.01
NECAB3-222	ENST00000607805	NAF1	Q96HR8	494 aa	Known RBP	21.39	■■□□□ 1.01
NECAB3-222	ENST00000607805	CFAP57	Q96MR6	1250 aa		21.39	■■□□□ 1.01
NECAB3-222	ENST00000607805	NAA15	Q9BXJ9	866 aa	Known RBP	21.39	■■□□□ 1.01
NECAB3-222	ENST00000607805	OSBPL2	Q9H1P3	480 aa		21.39	■■□□□ 1.01
NECAB3-222	ENST00000607805	CPNE5	Q9HCH3	593 aa		21.39	■■□□□ 1.01
NECAB3-222	ENST00000607805	NDFIP2	Q9NV92	336 aa		21.39	■■□□□ 1.01
NECAB3-222	ENST00000607805	EVA1B	Q9NVM1	165 aa		21.39	■■□□□ 1.01
NECAB3-222	ENST00000607805	SALL4	Q9UJQ4	1053 aa		21.39	■■□□□ 1.01
NECAB3-222	ENST00000607805	IGLON5	A6NGN9	336 aa		21.38	■■□□□ 1.01
NECAB3-222	ENST00000607805	C16orf96	A6NNT2	1141 aa		21.38	■■□□□ 1.01
NECAB3-222	ENST00000607805	TPP1	O14773	563 aa		21.38	■■□□□ 1.01
NECAB3-222	ENST00000607805	AQP9	O43315	295 aa		21.38	■■□□□ 1.01
NECAB3-222	ENST00000607805	TSPAN6	O43657	245 aa		21.38	■■□□□ 1.01
NECAB3-222	ENST00000607805	MTIF2	P46199	727 aa	Known RBP	21.38	■■□□□ 1.01
NECAB3-222	ENST00000607805	TMPRSS3	P57727	454 aa		21.38	■■□□□ 1.01
NECAB3-222	ENST00000607805	RHD	Q02161	417 aa		21.38	■■□□□ 1.01
NECAB3-222	ENST00000607805	NRG1	Q02297	640 aa	Predicted RBP	21.38	■■□□□ 1.01
NECAB3-222	ENST00000607805	DRAP1	Q14919	205 aa	Predicted RBP	21.38	■■□□□ 1.01
NECAB3-222	ENST00000607805	C2CD6	Q53TS8	623 aa		21.38	■■□□□ 1.01
NECAB3-222	ENST00000607805	GUSBP11	Q6P575	273 aa		21.38	■■□□□ 1.01
NECAB3-222	ENST00000607805	ZNF605	Q86T29	641 aa		21.38	■■□□□ 1.01
NECAB3-222	ENST00000607805	FAM131B	Q86XD5	332 aa		21.38	■■□□□ 1.01
NECAB3-222	ENST00000607805	DENND6B	Q8NEG7	585 aa		21.38	■■□□□ 1.01
NECAB3-222	ENST00000607805	RAB7B	Q96AH8	199 aa		21.38	■■□□□ 1.01
NECAB3-222	ENST00000607805	DPH1	Q9BZG8	443 aa		21.38	■■□□□ 1.01
NECAB3-222	ENST00000607805	ABCG4	Q9H172	646 aa		21.38	■■□□□ 1.01
NECAB3-222	ENST00000607805	HECA	Q9UBI9	543 aa	Predicted RBP	21.38	■■□□□ 1.01
NECAB3-222	ENST00000607805	GGT7	Q9UJ14	662 aa		21.38	■■□□□ 1.01
NECAB3-222	ENST00000607805	PNMA8B	Q9ULN7	279 aa	Predicted RBP	21.38	■■□□□ 1.01
NECAB3-222	ENST00000607805	NEU3	Q9UQ49	428 aa		21.38	■■□□□ 1.01
NECAB3-222	ENST00000607805	ENTPD2	Q9Y5L3	495 aa		21.38	■■□□□ 1.01
NECAB3-222	ENST00000607805	HECTD1	Q9ULT8	2610 aa		21.38	■■□□□ 1.01
NECAB3-222	ENST00000607805		H3BM21	787 aa		21.37	■■□□□ 1.01
NECAB3-222	ENST00000607805	FPGT	O14772	594 aa		21.37	■■□□□ 1.01
NECAB3-222	ENST00000607805	ACVRL1	P37023	503 aa		21.37	■■□□□ 1.01
NECAB3-222	ENST00000607805	C1QBP	Q07021	282 aa	Known RBP	21.37	■■□□□ 1.01
NECAB3-222	ENST00000607805	PDE1C	Q14123	709 aa	Predicted RBP	21.37	■■□□□ 1.01
NECAB3-222	ENST00000607805	BECN1	Q14457	450 aa		21.37	■■□□□ 1.01
NECAB3-222	ENST00000607805	CDKN3	Q16667	212 aa		21.37	■■□□□ 1.01
NECAB3-222	ENST00000607805	RAB6C	Q53S08	254 aa		21.37	■■□□□ 1.01
NECAB3-222	ENST00000607805	NLRP14	Q86W24	1093 aa		21.37	■■□□□ 1.01
NECAB3-222	ENST00000607805	KCNE4	Q8WWG9	221 aa		21.37	■■□□□ 1.01
NECAB3-222	ENST00000607805	CENPT	Q96BT3	561 aa		21.37	■■□□□ 1.01
NECAB3-222	ENST00000607805	GRAMD1A	Q96CP6	724 aa		21.37	■■□□□ 1.01
NECAB3-222	ENST00000607805	VCPIP1	Q96JH7	1222 aa		21.37	■■□□□ 1.01
NECAB3-222	ENST00000607805	SLC46A1	Q96NT5	459 aa		21.37	■■□□□ 1.01
NECAB3-222	ENST00000607805	BOC	Q9BWV1	1114 aa		21.37	■■□□□ 1.01
NECAB3-222	ENST00000607805	RAB6C	Q9H0N0	254 aa		21.37	■■□□□ 1.01
NECAB3-222	ENST00000607805	NDST4	Q9H3R1	872 aa		21.37	■■□□□ 1.01
NECAB3-222	ENST00000607805	ZDHHC6	Q9H6R6	413 aa		21.37	■■□□□ 1.01
NECAB3-222	ENST00000607805	NCKIPSD	Q9NZQ3	722 aa		21.37	■■□□□ 1.01
NECAB3-222	ENST00000607805	SATB2	Q9UPW6	733 aa		21.37	■■□□□ 1.01
NECAB3-222	ENST00000607805	FHOD1	Q9Y613	1164 aa		21.37	■■□□□ 1.01
NECAB3-222	ENST00000607805	AREL1	O15033	823 aa		21.36	■■□□□ 1.01
NECAB3-222	ENST00000607805	LSM8	O95777	96 aa	Known RBP	21.36	■■□□□ 1.01
NECAB3-222	ENST00000607805	JUND	P17535	347 aa		21.36	■■□□□ 1.01
NECAB3-222	ENST00000607805	GK	P32189	559 aa		21.36	■■□□□ 1.01
NECAB3-222	ENST00000607805	DNA2	P51530	1060 aa		21.36	■■□□□ 1.01
NECAB3-222	ENST00000607805	NOMO3	P69849	1222 aa		21.36	■■□□□ 1.01
NECAB3-222	ENST00000607805	DEFB133	Q30KQ1	61 aa		21.36	■■□□□ 1.01
NECAB3-222	ENST00000607805	ZNF805	Q5CZA5	627 aa		21.36	■■□□□ 1.01
NECAB3-222	ENST00000607805	BROX	Q5VW32	411 aa		21.36	■■□□□ 1.01
NECAB3-222	ENST00000607805	EFL1	Q7Z2Z2	1120 aa	Known RBP	21.36	■■□□□ 1.01
NECAB3-222	ENST00000607805	DRC7	Q8IY82	874 aa		21.36	■■□□□ 1.01
NECAB3-222	ENST00000607805	TTC9	Q92623	222 aa		21.36	■■□□□ 1.01
NECAB3-222	ENST00000607805	ARHGEF2	Q92974	986 aa	Known RBP	21.36	■■□□□ 1.01

Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms