RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 NAPEPLDQ6IQ20 393 aa16.74■□□□□ 0.27
PMF1-206ENST00000606952 PTCRAQ6ISU1 281 aaPredicted RBP16.74■□□□□ 0.27
PMF1-206ENST00000606952 LINGO4Q6UY18 593 aa16.74■□□□□ 0.27
PMF1-206ENST00000606952 TMC3Q7Z5M5 1100 aa16.74■□□□□ 0.27
PMF1-206ENST00000606952 CAND1Q86VP6 1230 aaKnown RBP16.74■□□□□ 0.27
PMF1-206ENST00000606952 SLC44A3Q8N4M1 653 aa16.74■□□□□ 0.27
PMF1-206ENST00000606952 PCDH20Q8N6Y1 951 aaKnown RBP16.74■□□□□ 0.27
PMF1-206ENST00000606952 PDCD7Q8N8D1 485 aaKnown RBP16.74■□□□□ 0.27
PMF1-206ENST00000606952 NAT16Q8N8M0 369 aa16.74■□□□□ 0.27
PMF1-206ENST00000606952 ST13P5Q8NFI4 369 aaPredicted RBP16.74■□□□□ 0.27
PMF1-206ENST00000606952 MYO19Q96H55 970 aa16.74■□□□□ 0.27
PMF1-206ENST00000606952 SERPINB12Q96P63 405 aa16.74■□□□□ 0.27
PMF1-206ENST00000606952 ARNT2Q9HBZ2 717 aa16.74■□□□□ 0.27
PMF1-206ENST00000606952 SLC25A13Q9UJS0 675 aa16.74■□□□□ 0.27
PMF1-206ENST00000606952 E7EVH7 732 aa16.73■□□□□ 0.27
PMF1-206ENST00000606952 AP3B1O00203 1094 aa16.73■□□□□ 0.27
PMF1-206ENST00000606952 INSIG1O15503 277 aa16.73■□□□□ 0.27
PMF1-206ENST00000606952 SMAD6O43541 496 aaKnown RBP16.73■□□□□ 0.27
PMF1-206ENST00000606952 ZNF821O75541 412 aaPredicted RBP16.73■□□□□ 0.27
PMF1-206ENST00000606952 GSRP00390 522 aa16.73■□□□□ 0.27
PMF1-206ENST00000606952 EPOP01588 193 aa16.73■□□□□ 0.27
PMF1-206ENST00000606952 DLDP09622 509 aaKnown RBP16.73■□□□□ 0.27
PMF1-206ENST00000606952 CTSOP43234 321 aaPredicted RBP16.73■□□□□ 0.27
PMF1-206ENST00000606952 MAPK8P45983 427 aa16.73■□□□□ 0.27
PMF1-206ENST00000606952 RGRP47804 291 aa16.73■□□□□ 0.27
PMF1-206ENST00000606952 SLC6A11P48066 632 aa16.73■□□□□ 0.27
PMF1-206ENST00000606952 MAXP61244 160 aa16.73■□□□□ 0.27
PMF1-206ENST00000606952 SARNPP82979 210 aaKnown RBP16.73■□□□□ 0.27
PMF1-206ENST00000606952 DSC2Q02487 901 aa16.73■□□□□ 0.27
PMF1-206ENST00000606952 IHHQ14623 411 aa16.73■□□□□ 0.27
PMF1-206ENST00000606952 HIF1AQ16665 826 aa16.73■□□□□ 0.27
PMF1-206ENST00000606952 PTPRNQ16849 979 aa16.73■□□□□ 0.27
PMF1-206ENST00000606952 C22orf39Q6P5X5 142 aa16.73■□□□□ 0.27
PMF1-206ENST00000606952 LRRC8BQ6P9F7 803 aa16.73■□□□□ 0.27
PMF1-206ENST00000606952 LEKR1Q6ZMV7 388 aa16.73■□□□□ 0.27
PMF1-206ENST00000606952 LINC00523Q86TU6 105 aa16.73■□□□□ 0.27
PMF1-206ENST00000606952 LRRC39Q96DD0 335 aa16.73■□□□□ 0.27
PMF1-206ENST00000606952 MSANTD3Q96H12 275 aa16.73■□□□□ 0.27
PMF1-206ENST00000606952 SEMA3CQ99985 751 aa16.73■□□□□ 0.27
PMF1-206ENST00000606952 ARFGAP3Q9NP61 516 aa16.73■□□□□ 0.27
PMF1-206ENST00000606952 CASS4Q9NQ75 786 aa16.73■□□□□ 0.27
PMF1-206ENST00000606952 ELOVL2Q9NXB9 296 aa16.73■□□□□ 0.27
PMF1-206ENST00000606952 ERVW-1Q9UQF0 538 aa16.73■□□□□ 0.27
PMF1-206ENST00000606952 FCF1Q9Y324 198 aaKnown RBP16.73■□□□□ 0.27
PMF1-206ENST00000606952 PRRT4C9JH25 899 aa16.72■□□□□ 0.27
PMF1-206ENST00000606952 ALOX15BO15296 676 aa16.72■□□□□ 0.27
PMF1-206ENST00000606952 MT-CYBP00156 380 aaPredicted RBP16.72■□□□□ 0.27
PMF1-206ENST00000606952 ATP5BP06576 529 aaKnown RBP16.72■□□□□ 0.27
PMF1-206ENST00000606952 SERPINF2P08697 491 aa16.72■□□□□ 0.27
PMF1-206ENST00000606952 GLULP15104 373 aa16.72■□□□□ 0.27
PMF1-206ENST00000606952 SP100P23497 879 aaPredicted RBP16.72■□□□□ 0.27
PMF1-206ENST00000606952 RHOAP61586 193 aa16.72■□□□□ 0.27
PMF1-206ENST00000606952 AP1S1P61966 158 aa16.72■□□□□ 0.27
PMF1-206ENST00000606952 MESP2Q0VG99 397 aa16.72■□□□□ 0.27
PMF1-206ENST00000606952 NCEH1Q6PIU2 408 aa16.72■□□□□ 0.27
PMF1-206ENST00000606952 RANBP10Q6VN20 620 aa16.72■□□□□ 0.27
PMF1-206ENST00000606952 CENPUQ71F23 418 aa16.72■□□□□ 0.27
PMF1-206ENST00000606952 PDIK1LQ8N165 341 aa16.72■□□□□ 0.27
PMF1-206ENST00000606952 TAB3Q8N5C8 712 aaPredicted RBP16.72■□□□□ 0.27
PMF1-206ENST00000606952 SPATA22Q8NHS9 363 aa16.72■□□□□ 0.27
PMF1-206ENST00000606952 CSGALNACT1Q8TDX6 532 aa16.72■□□□□ 0.27
PMF1-206ENST00000606952 FRS2Q8WU20 508 aa16.72■□□□□ 0.27
PMF1-206ENST00000606952 VOPP1Q96AW1 172 aa16.72■□□□□ 0.27
PMF1-206ENST00000606952 FEM1CQ96JP0 617 aa16.72■□□□□ 0.27
PMF1-206ENST00000606952 MRGPRX2Q96LB1 330 aa16.72■□□□□ 0.27
PMF1-206ENST00000606952 RBM15Q96T37 977 aaKnown RBP eCLIP16.72■□□□□ 0.27
PMF1-206ENST00000606952 C8orf33Q9H7E9 229 aaPredicted RBP16.72■□□□□ 0.27
PMF1-206ENST00000606952 SLC2A4RGQ9NR83 387 aa16.72■□□□□ 0.27
PMF1-206ENST00000606952 PRKAG3Q9UGI9 489 aa16.72■□□□□ 0.27
PMF1-206ENST00000606952 STARD13Q9Y3M8 1113 aa16.72■□□□□ 0.27
PMF1-206ENST00000606952 LOC285095A0A1B0GVY8 99 aa16.71■□□□□ 0.27
PMF1-206ENST00000606952 WASH3PC4AMC7 463 aa16.71■□□□□ 0.27
PMF1-206ENST00000606952 K7ERQ8 282 aa16.71■□□□□ 0.27
PMF1-206ENST00000606952 CHRM1P11229 460 aaPredicted RBP16.71■□□□□ 0.27
PMF1-206ENST00000606952 CD86P42081 329 aa16.71■□□□□ 0.27
PMF1-206ENST00000606952 GRIA2P42262 883 aa16.71■□□□□ 0.27
PMF1-206ENST00000606952 STK19P49842 368 aaPredicted RBP16.71■□□□□ 0.27
PMF1-206ENST00000606952 WNT3AP56704 352 aa16.71■□□□□ 0.27
PMF1-206ENST00000606952 E2F5Q15329 346 aa16.71■□□□□ 0.27
PMF1-206ENST00000606952 DGKKQ5KSL6 1271 aa16.71■□□□□ 0.27
PMF1-206ENST00000606952 FNBP1LQ5T0N5 605 aa16.71■□□□□ 0.27
PMF1-206ENST00000606952 DENND5AQ6IQ26 1287 aa16.71■□□□□ 0.27
PMF1-206ENST00000606952 ATP11CQ8NB49 1132 aa16.71■□□□□ 0.27
PMF1-206ENST00000606952 OR2AP1Q8NGE2 309 aa16.71■□□□□ 0.27
PMF1-206ENST00000606952 SPOCK2Q92563 424 aa16.71■□□□□ 0.27
PMF1-206ENST00000606952 NSMCE3Q96MG7 304 aa16.71■□□□□ 0.27
PMF1-206ENST00000606952 GDAP1L1Q96MZ0 367 aa16.71■□□□□ 0.27
PMF1-206ENST00000606952 TRIB3Q96RU7 358 aa16.71■□□□□ 0.27
PMF1-206ENST00000606952 LIMD1Q9UGP4 676 aa16.71■□□□□ 0.27
PMF1-206ENST00000606952 TTLL3Q9Y4R7 772 aa16.71■□□□□ 0.27
PMF1-206ENST00000606952 PRUNE2Q8WUY3 3088 aa16.71■□□□□ 0.27
PMF1-206ENST00000606952 MYO10Q9HD67 2058 aa16.7■□□□□ 0.26
PMF1-206ENST00000606952 F5H423 210 aaPredicted RBP16.7■□□□□ 0.26
PMF1-206ENST00000606952 KAT7O95251 611 aa16.7■□□□□ 0.26
PMF1-206ENST00000606952 IGSF6O95976 241 aa16.7■□□□□ 0.26
PMF1-206ENST00000606952 IL9P15248 144 aa16.7■□□□□ 0.26
PMF1-206ENST00000606952 CTHP32929 405 aa16.7■□□□□ 0.26
PMF1-206ENST00000606952 GRIA1P42261 906 aa16.7■□□□□ 0.26
PMF1-206ENST00000606952 LMAN1P49257 510 aa16.7■□□□□ 0.26
PMF1-206ENST00000606952 NUMBP49757 651 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms