RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 FADS3Q9Y5Q0 445 aa16.65■□□□□ 0.26
TUBE1-206ENST00000603722 PLXNA2O75051 1894 aa16.65■□□□□ 0.26
TUBE1-206ENST00000603722 ZSCAN5CA6NGD5 496 aaPredicted RBP16.64■□□□□ 0.25
TUBE1-206ENST00000603722 WASH4PA8MWX3 477 aa16.64■□□□□ 0.25
TUBE1-206ENST00000603722 RASA4BC9J798 803 aa16.64■□□□□ 0.25
TUBE1-206ENST00000603722 DDX3XO00571 662 aaKnown RBP eCLIP16.64■□□□□ 0.25
TUBE1-206ENST00000603722 RASA4O43374 803 aa16.64■□□□□ 0.25
TUBE1-206ENST00000603722 SDC3O75056 442 aa16.64■□□□□ 0.25
TUBE1-206ENST00000603722 FTLP02792 175 aaPredicted RBP16.64■□□□□ 0.25
TUBE1-206ENST00000603722 UGT2B4P06133 528 aa16.64■□□□□ 0.25
TUBE1-206ENST00000603722 THEGLP0DJG4 465 aa16.64■□□□□ 0.25
TUBE1-206ENST00000603722 ABL2P42684 1182 aa16.64■□□□□ 0.25
TUBE1-206ENST00000603722 RXRGP48443 463 aa16.64■□□□□ 0.25
TUBE1-206ENST00000603722 CLDN2P57739 230 aa16.64■□□□□ 0.25
TUBE1-206ENST00000603722 TPI1P60174 286 aa16.64■□□□□ 0.25
TUBE1-206ENST00000603722 TPM4P67936 248 aa16.64■□□□□ 0.25
TUBE1-206ENST00000603722 NR1I3Q14994 352 aa16.64■□□□□ 0.25
TUBE1-206ENST00000603722 TMEM259Q4ZIN3 620 aa16.64■□□□□ 0.25
TUBE1-206ENST00000603722 KIAA1161Q6NSJ0 714 aa16.64■□□□□ 0.25
TUBE1-206ENST00000603722 OR13H1Q8NG92 308 aa16.64■□□□□ 0.25
TUBE1-206ENST00000603722 CNDP2Q96KP4 475 aaKnown RBP16.64■□□□□ 0.25
TUBE1-206ENST00000603722 CALN1Q9BXU9 219 aa16.64■□□□□ 0.25
TUBE1-206ENST00000603722 TRIM7Q9C029 511 aa16.64■□□□□ 0.25
TUBE1-206ENST00000603722 CNOT8Q9UFF9 292 aaKnown RBP16.64■□□□□ 0.25
TUBE1-206ENST00000603722 AP4E1Q9UPM8 1137 aa16.64■□□□□ 0.25
TUBE1-206ENST00000603722 ITM2BQ9Y287 266 aa16.64■□□□□ 0.25
TUBE1-206ENST00000603722 KMT2BQ9UMN6 2715 aaPredicted RBP16.64■□□□□ 0.25
TUBE1-206ENST00000603722 C16orf96A6NNT2 1141 aa16.63■□□□□ 0.25
TUBE1-206ENST00000603722 ENC1O14682 589 aa16.63■□□□□ 0.25
TUBE1-206ENST00000603722 FGF10O15520 208 aaPredicted RBP16.63■□□□□ 0.25
TUBE1-206ENST00000603722 AP1G1O43747 822 aa16.63■□□□□ 0.25
TUBE1-206ENST00000603722 SKILP12757 684 aa16.63■□□□□ 0.25
TUBE1-206ENST00000603722 YBEYP58557 167 aaPredicted RBP16.63■□□□□ 0.25
TUBE1-206ENST00000603722 RHOAP61586 193 aa16.63■□□□□ 0.25
TUBE1-206ENST00000603722 RPS21P63220 83 aaKnown RBP16.63■□□□□ 0.25
TUBE1-206ENST00000603722 CA9Q16790 459 aa16.63■□□□□ 0.25
TUBE1-206ENST00000603722 MYLK3Q32MK0 819 aa16.63■□□□□ 0.25
TUBE1-206ENST00000603722 PARP15Q460N3 678 aa16.63■□□□□ 0.25
TUBE1-206ENST00000603722 ZNF805Q5CZA5 627 aa16.63■□□□□ 0.25
TUBE1-206ENST00000603722 CCNI2Q6ZMN8 369 aaPredicted RBP16.63■□□□□ 0.25
TUBE1-206ENST00000603722 GCNT7Q6ZNI0 430 aa16.63■□□□□ 0.25
TUBE1-206ENST00000603722 MARCH9Q86YJ5 346 aa16.63■□□□□ 0.25
TUBE1-206ENST00000603722 VOPP1Q96AW1 172 aa16.63■□□□□ 0.25
TUBE1-206ENST00000603722 ZNF653Q96CK0 615 aa16.63■□□□□ 0.25
TUBE1-206ENST00000603722 LRIG1Q96JA1 1093 aa16.63■□□□□ 0.25
TUBE1-206ENST00000603722 GDAP1L1Q96MZ0 367 aa16.63■□□□□ 0.25
TUBE1-206ENST00000603722 PEBP4Q96S96 227 aa16.63■□□□□ 0.25
TUBE1-206ENST00000603722 OSBPL1AQ9BXW6 950 aa16.63■□□□□ 0.25
TUBE1-206ENST00000603722 DHX35Q9H5Z1 703 aaKnown RBP16.63■□□□□ 0.25
TUBE1-206ENST00000603722 PCSK1NQ9UHG2 260 aa16.63■□□□□ 0.25
TUBE1-206ENST00000603722 USP24Q9UPU5 2620 aa16.62■□□□□ 0.25
TUBE1-206ENST00000603722 TMEM191CA6NGB0 347 aa16.62■□□□□ 0.25
TUBE1-206ENST00000603722 EEF2KO00418 725 aaKnown RBP16.62■□□□□ 0.25
TUBE1-206ENST00000603722 NEMP1O14524 444 aa16.62■□□□□ 0.25
TUBE1-206ENST00000603722 POP4O95707 220 aaKnown RBP16.62■□□□□ 0.25
TUBE1-206ENST00000603722 LDOC1O95751 146 aaPredicted RBP16.62■□□□□ 0.25
TUBE1-206ENST00000603722 IGSF6O95976 241 aa16.62■□□□□ 0.25
TUBE1-206ENST00000603722 GZMAP12544 262 aa16.62■□□□□ 0.25
TUBE1-206ENST00000603722 HTR7P34969 479 aa16.62■□□□□ 0.25
TUBE1-206ENST00000603722 FANCCQ00597 558 aa16.62■□□□□ 0.25
TUBE1-206ENST00000603722 DNAJC3Q13217 504 aa16.62■□□□□ 0.25
TUBE1-206ENST00000603722 SERINC3Q13530 473 aa16.62■□□□□ 0.25
TUBE1-206ENST00000603722 FGL2Q14314 439 aa16.62■□□□□ 0.25
TUBE1-206ENST00000603722 TDRD12Q587J7 1177 aaKnown RBP16.62■□□□□ 0.25
TUBE1-206ENST00000603722 FIGNQ5HY92 759 aa16.62■□□□□ 0.25
TUBE1-206ENST00000603722 DHRS13Q6UX07 377 aa16.62■□□□□ 0.25
TUBE1-206ENST00000603722 TMPRSS7Q7RTY8 843 aa16.62■□□□□ 0.25
TUBE1-206ENST00000603722 KANSL1Q7Z3B3 1105 aa16.62■□□□□ 0.25
TUBE1-206ENST00000603722 PTAR1Q7Z6K3 402 aaPredicted RBP16.62■□□□□ 0.25
TUBE1-206ENST00000603722 UMODL1-AS1Q8N2C9 162 aa16.62■□□□□ 0.25
TUBE1-206ENST00000603722 ARFGAP1Q8N6T3 406 aa16.62■□□□□ 0.25
TUBE1-206ENST00000603722 CASKIN2Q8WXE0 1202 aa16.62■□□□□ 0.25
TUBE1-206ENST00000603722 CELF6Q96J87 481 aaKnown RBP16.62■□□□□ 0.25
TUBE1-206ENST00000603722 EXOC2Q96KP1 924 aa16.62■□□□□ 0.25
TUBE1-206ENST00000603722 KLHL32Q96NJ5 620 aa16.62■□□□□ 0.25
TUBE1-206ENST00000603722 SNRNP25Q9BV90 132 aaKnown RBP16.62■□□□□ 0.25
TUBE1-206ENST00000603722 SLC17A9Q9BYT1 436 aa16.62■□□□□ 0.25
TUBE1-206ENST00000603722 EDEM3Q9BZQ6 932 aa16.62■□□□□ 0.25
TUBE1-206ENST00000603722 MYO1AQ9UBC5 1043 aa16.62■□□□□ 0.25
TUBE1-206ENST00000603722 GGT7Q9UJ14 662 aa16.62■□□□□ 0.25
TUBE1-206ENST00000603722 SCINQ9Y6U3 715 aa16.62■□□□□ 0.25
TUBE1-206ENST00000603722 MAP1BP46821 2468 aaKnown RBP16.61■□□□□ 0.25
TUBE1-206ENST00000603722 A6NNZ2 444 aa16.61■□□□□ 0.25
TUBE1-206ENST00000603722 RAD51BO15315 384 aa16.61■□□□□ 0.25
TUBE1-206ENST00000603722 PAK4O96013 591 aaPredicted RBP16.61■□□□□ 0.25
TUBE1-206ENST00000603722 INO80DQ53TQ3 878 aaPredicted RBP16.61■□□□□ 0.25
TUBE1-206ENST00000603722 LRRC73Q5JTD7 316 aa16.61■□□□□ 0.25
TUBE1-206ENST00000603722 GDPD4Q6W3E5 623 aa16.61■□□□□ 0.25
TUBE1-206ENST00000603722 ABI3BPQ7Z7G0 1075 aa16.61■□□□□ 0.25
TUBE1-206ENST00000603722 SLC22A18ASQ8N1D0 253 aa16.61■□□□□ 0.25
TUBE1-206ENST00000603722 FNIP1Q8TF40 1166 aa16.61■□□□□ 0.25
TUBE1-206ENST00000603722 RAB7BQ96AH8 199 aa16.61■□□□□ 0.25
TUBE1-206ENST00000603722 TRIM11Q96F44 468 aa16.61■□□□□ 0.25
TUBE1-206ENST00000603722 FEM1CQ96JP0 617 aa16.61■□□□□ 0.25
TUBE1-206ENST00000603722 KCTD15Q96SI1 283 aaPredicted RBP16.61■□□□□ 0.25
TUBE1-206ENST00000603722 LRRC19Q9H756 370 aa16.61■□□□□ 0.25
TUBE1-206ENST00000603722 UBA2Q9UBT2 640 aaPredicted RBP16.61■□□□□ 0.25
TUBE1-206ENST00000603722 FREM2Q5SZK8 3169 aa16.61■□□□□ 0.25
TUBE1-206ENST00000603722 FAM149AA5PLN7 773 aa16.6■□□□□ 0.25
TUBE1-206ENST00000603722 IGLON5A6NGN9 336 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms