RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 CLCNKAP51800 687 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 HIRAP54198 1017 aaPredicted RBP5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 MLLT6P55198 1093 aaPredicted RBP5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 GUCY1A3Q02108 690 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 PPATQ06203 517 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 FSTL1Q12841 308 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 NPRL3Q12980 569 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 IL24Q13007 206 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 GAS6Q14393 721 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 FIGNQ5HY92 759 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 ERICH5Q6P6B1 374 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 FAM111BQ6SJ93 734 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 TMEM270Q6UE05 265 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 ANO5Q75V66 913 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 ITIH5Q86UX2 942 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 TMEM200AQ86VY9 491 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 PALM2Q8IXS6 379 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 NATD1Q8N6N6 113 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 CALML6Q8TD86 181 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 ASAP3Q8TDY4 903 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 CHURC1Q8WUH1 139 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 FBXO32Q969P5 355 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 RMDN1Q96DB5 314 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 TM9SF2Q99805 663 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 CTRCQ99895 268 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 PINK1Q9BXM7 581 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 HSD3B7Q9H2F3 369 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 RNPEPL1Q9HAU8 725 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 MBIPQ9NS73 344 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 USP40Q9NVE5 1235 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 INTS13Q9NVM9 706 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 RNF24Q9Y225 148 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 TRPV2Q9Y5S1 764 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 TUBGCP6Q96RT7 1819 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 COL18A1P39060 1754 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 KIAA1551Q9HCM1 1747 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 MYH7P12883 1935 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 MYH13Q9UKX3 1938 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 ACEP12821 1306 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 CYP3A7-CYP3A51PA0A087WV96 503 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 SH3PXD2BA1X283 911 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 PTPDC1A2A3K4 754 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 KPNA7A9QM74 516 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 CENPBD1B2RD01 187 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 STX16-NPEPL1H3BU86 382 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 DNALI1O14645 258 aaPredicted RBP5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 CNOT3O75175 753 aaKnown RBP5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 IGHEP01854 428 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 ARP10275 920 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 CYP3A7P24462 503 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 PTGER3P43115 390 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 MAPKAPK2P49137 400 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 CDK7P50613 346 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 PDE1AP54750 535 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 DLG4P78352 724 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 GCNT1Q02742 428 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 CEBPEQ15744 281 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 C3orf36Q3SXR2 165 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 DUSP28Q4G0W2 176 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 C3orf38Q5JPI3 329 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 ERMARDQ5T6L9 678 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 C8orf74Q6P047 294 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 KLHL35Q6PF15 583 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 CCNJLQ8IV13 435 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 NELFCDQ8IXH7 590 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 ARHGAP24Q8N264 748 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 TSPYL6Q8N831 410 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 ENDOVQ8N8Q3 282 aaKnown RBP5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 SCAMP5Q8TAC9 235 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 LRRC8CQ8TDW0 803 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 EME1Q96AY2 570 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 VWCEQ96DN2 955 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 PLEKHF1Q96S99 279 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 TSG101Q99816 390 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 SCAND2PQ9GZW5 306 aaPredicted RBP5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 SLC38A10Q9HBR0 1119 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 NEK6Q9HC98 313 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 SEPSECSQ9HD40 501 aaKnown RBP5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 MRPL40Q9NQ50 206 aaKnown RBP5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 STXBP5LQ9Y2K9 1186 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 NSD3Q9BZ95 1437 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 SLC35F4A4IF30 521 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 C2CD2LO14523 706 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 GPRIN2O60269 458 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 MMP20O60882 483 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 DTNBO60941 627 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 HSF2BPO75031 334 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 IL18RAPO95256 599 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 CYP1A1P04798 512 aaPredicted RBP5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 IL10P22301 178 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 CHRNA3P32297 505 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 ICAM3P32942 547 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 TRIM23P36406 574 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 STAT5AP42229 794 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 MAP3K7CLP57077 242 aa5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 POLR2GP62487 172 aaKnown RBP eCLIP5.1□□□□□ -1.59
SPTBN1-206ENST00000602898 PLAURQ03405 335 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms