RNA–Protein interactions for RNA: ENST00000602848.5

PPFIA3-211, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-211ENST00000602848 SGSM3Q96HU1 749 aa22.57■■□□□ 1.2
PPFIA3-211ENST00000602848 FEM1CQ96JP0 617 aa22.57■■□□□ 1.2
PPFIA3-211ENST00000602848 SEMA3CQ99985 751 aa22.57■■□□□ 1.2
PPFIA3-211ENST00000602848 CINPQ9BW66 212 aaPredicted RBP22.57■■□□□ 1.2
PPFIA3-211ENST00000602848 SMYD2Q9NRG4 433 aa22.57■■□□□ 1.2
PPFIA3-211ENST00000602848 TDP1Q9NUW8 608 aa22.57■■□□□ 1.2
PPFIA3-211ENST00000602848 PRKAG3Q9UGI9 489 aa22.57■■□□□ 1.2
PPFIA3-211ENST00000602848 MSRAQ9UJ68 235 aa22.57■■□□□ 1.2
PPFIA3-211ENST00000602848 OR51B4Q9Y5P0 310 aa22.57■■□□□ 1.2
PPFIA3-211ENST00000602848 ZCWPW2A0A1B0GU75 182 aa22.56■■□□□ 1.2
PPFIA3-211ENST00000602848 CCDC195A0A1B0GUA6 201 aa22.56■■□□□ 1.2
PPFIA3-211ENST00000602848 SERPINF2P08697 491 aa22.56■■□□□ 1.2
PPFIA3-211ENST00000602848 TPH1P17752 444 aa22.56■■□□□ 1.2
PPFIA3-211ENST00000602848 WEE1P30291 646 aa22.56■■□□□ 1.2
PPFIA3-211ENST00000602848 MAXP61244 160 aa22.56■■□□□ 1.2
PPFIA3-211ENST00000602848 SLC12A1Q13621 1099 aa22.56■■□□□ 1.2
PPFIA3-211ENST00000602848 CDH18Q13634 790 aa22.56■■□□□ 1.2
PPFIA3-211ENST00000602848 FYB2Q5VWT5 728 aa22.56■■□□□ 1.2
PPFIA3-211ENST00000602848 LEKR1Q6ZMV7 388 aa22.56■■□□□ 1.2
PPFIA3-211ENST00000602848 MDM1Q8TC05 714 aa22.56■■□□□ 1.2
PPFIA3-211ENST00000602848 DDI1Q8WTU0 396 aa22.56■■□□□ 1.2
PPFIA3-211ENST00000602848 ZNF669Q96BR6 464 aaPredicted RBP22.56■■□□□ 1.2
PPFIA3-211ENST00000602848 TCEAL4Q96EI5 215 aa22.56■■□□□ 1.2
PPFIA3-211ENST00000602848 CCDC134Q9H6E4 229 aa22.56■■□□□ 1.2
PPFIA3-211ENST00000602848 TBC1D14Q9P2M4 693 aa22.56■■□□□ 1.2
PPFIA3-211ENST00000602848 HCFC2Q9Y5Z7 792 aa22.56■■□□□ 1.2
PPFIA3-211ENST00000602848 HELZP42694 1942 aaKnown RBP22.55■■□□□ 1.2
PPFIA3-211ENST00000602848 FAM47DPA6NHR8 397 aa22.55■■□□□ 1.2
PPFIA3-211ENST00000602848 CBX4O00257 560 aa22.55■■□□□ 1.2
PPFIA3-211ENST00000602848 ZMPSTE24O75844 475 aa22.55■■□□□ 1.2
PPFIA3-211ENST00000602848 PBX2P40425 430 aa22.55■■□□□ 1.2
PPFIA3-211ENST00000602848 RALGPS1Q5JS13 557 aa22.55■■□□□ 1.2
PPFIA3-211ENST00000602848 METTL3Q86U44 580 aaKnown RBP22.55■■□□□ 1.2
PPFIA3-211ENST00000602848 MFN1Q8IWA4 741 aa22.55■■□□□ 1.2
PPFIA3-211ENST00000602848 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.55■■□□□ 1.2
PPFIA3-211ENST00000602848 ZNF557Q8N988 423 aaPredicted RBP22.55■■□□□ 1.2
PPFIA3-211ENST00000602848 DCAF4L2Q8NA75 395 aa22.55■■□□□ 1.2
PPFIA3-211ENST00000602848 FIBINQ8TAL6 211 aa22.55■■□□□ 1.2
PPFIA3-211ENST00000602848 ZNF707Q96C28 371 aaPredicted RBP22.55■■□□□ 1.2
PPFIA3-211ENST00000602848 FCRL3Q96P31 734 aaPredicted RBP22.55■■□□□ 1.2
PPFIA3-211ENST00000602848 CDCA3Q99618 268 aaPredicted RBP22.55■■□□□ 1.2
PPFIA3-211ENST00000602848 TRIM56Q9BRZ2 755 aaKnown RBP22.55■■□□□ 1.2
PPFIA3-211ENST00000602848 EPN3Q9H201 632 aa22.55■■□□□ 1.2
PPFIA3-211ENST00000602848 TLE6Q9H808 572 aa22.55■■□□□ 1.2
PPFIA3-211ENST00000602848 NSMCE4AQ9NXX6 385 aa22.55■■□□□ 1.2
PPFIA3-211ENST00000602848 KIAA1522Q9P206 1035 aaPredicted RBP22.55■■□□□ 1.2
PPFIA3-211ENST00000602848 ARIH1Q9Y4X5 557 aaPredicted RBP22.55■■□□□ 1.2
PPFIA3-211ENST00000602848 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.54■■□□□ 1.2
PPFIA3-211ENST00000602848 NRG2O14511 850 aaPredicted RBP22.54■■□□□ 1.2
PPFIA3-211ENST00000602848 CREB1P16220 341 aa22.54■■□□□ 1.2
PPFIA3-211ENST00000602848 HLA-DPA1P20036 260 aa22.54■■□□□ 1.2
PPFIA3-211ENST00000602848 SERPINH1P50454 418 aaKnown RBP22.54■■□□□ 1.2
PPFIA3-211ENST00000602848 PLK1P53350 603 aa22.54■■□□□ 1.2
PPFIA3-211ENST00000602848 NSUN2Q08J23 767 aaKnown RBP eCLIP22.54■■□□□ 1.2
PPFIA3-211ENST00000602848 DUSP6Q16828 381 aa22.54■■□□□ 1.2
PPFIA3-211ENST00000602848 PDPK2PQ6A1A2 396 aa22.54■■□□□ 1.2
PPFIA3-211ENST00000602848 TIFABQ6ZNK6 161 aa22.54■■□□□ 1.2
PPFIA3-211ENST00000602848 NLRP9Q7RTR0 991 aa22.54■■□□□ 1.2
PPFIA3-211ENST00000602848 ACDQ96AP0 544 aa22.54■■□□□ 1.2
PPFIA3-211ENST00000602848 OTUB2Q96DC9 234 aa22.54■■□□□ 1.2
PPFIA3-211ENST00000602848 ALG14Q96F25 216 aa22.54■■□□□ 1.2
PPFIA3-211ENST00000602848 C2orf49Q9BVC5 232 aaPredicted RBP22.54■■□□□ 1.2
PPFIA3-211ENST00000602848 PBX4Q9BYU1 374 aa22.54■■□□□ 1.2
PPFIA3-211ENST00000602848 PPANQ9NQ55 473 aaKnown RBP22.54■■□□□ 1.2
PPFIA3-211ENST00000602848 CHRAC1Q9NRG0 131 aa22.54■■□□□ 1.2
PPFIA3-211ENST00000602848 ZFATQ9P243 1243 aa22.54■■□□□ 1.2
PPFIA3-211ENST00000602848 TCAF1Q9Y4C2 921 aa22.54■■□□□ 1.2
PPFIA3-211ENST00000602848 A0A1W2PPM1 405 aa22.53■■□□□ 1.2
PPFIA3-211ENST00000602848 HEATR9A2RTY3 570 aa22.53■■□□□ 1.2
PPFIA3-211ENST00000602848 PER2O15055 1255 aa22.53■■□□□ 1.2
PPFIA3-211ENST00000602848 KRT4P19013 534 aa22.53■■□□□ 1.2
PPFIA3-211ENST00000602848 CDK18Q07002 472 aa22.53■■□□□ 1.2
PPFIA3-211ENST00000602848 CYTH1Q15438 398 aa22.53■■□□□ 1.2
PPFIA3-211ENST00000602848 SLC1A5Q15758 541 aa22.53■■□□□ 1.2
PPFIA3-211ENST00000602848 FSCBQ5H9T9 825 aa22.53■■□□□ 1.2
PPFIA3-211ENST00000602848 GRTP1Q5TC63 336 aa22.53■■□□□ 1.2
PPFIA3-211ENST00000602848 TTC19Q6DKK2 380 aaPredicted RBP22.53■■□□□ 1.2
PPFIA3-211ENST00000602848 RETSATQ6NUM9 610 aa22.53■■□□□ 1.2
PPFIA3-211ENST00000602848 ATXN2LQ8WWM7 1075 aaKnown RBP22.53■■□□□ 1.2
PPFIA3-211ENST00000602848 USP13Q92995 863 aaPredicted RBP22.53■■□□□ 1.2
PPFIA3-211ENST00000602848 IFT43Q96FT9 208 aa22.53■■□□□ 1.2
PPFIA3-211ENST00000602848 NUDCD1Q96RS6 583 aa22.53■■□□□ 1.2
PPFIA3-211ENST00000602848 CPNE1Q99829 537 aa22.53■■□□□ 1.2
PPFIA3-211ENST00000602848 VPS28Q9UK41 221 aa22.53■■□□□ 1.2
PPFIA3-211ENST00000602848 SOX1O00570 391 aaPredicted RBP22.53■■□□□ 1.2
PPFIA3-211ENST00000602848 TYROBPO43914 113 aa22.53■■□□□ 1.2
PPFIA3-211ENST00000602848 PIAS1O75925 651 aa22.53■■□□□ 1.2
PPFIA3-211ENST00000602848 PAPSS2O95340 614 aaPredicted RBP22.53■■□□□ 1.2
PPFIA3-211ENST00000602848 PAMP19021 973 aa22.53■■□□□ 1.2
PPFIA3-211ENST00000602848 CR2P20023 1033 aa22.53■■□□□ 1.2
PPFIA3-211ENST00000602848 ARF5P84085 180 aa22.53■■□□□ 1.2
PPFIA3-211ENST00000602848 SLC18A2Q05940 514 aa22.53■■□□□ 1.2
PPFIA3-211ENST00000602848 SLC20A2Q08357 652 aa22.53■■□□□ 1.2
PPFIA3-211ENST00000602848 PCSK7Q16549 785 aa22.53■■□□□ 1.2
PPFIA3-211ENST00000602848 SLC5A9Q2M3M2 681 aa22.53■■□□□ 1.2
PPFIA3-211ENST00000602848 GRASPQ7Z6J2 395 aaPredicted RBP22.53■■□□□ 1.2
PPFIA3-211ENST00000602848 RASSF3Q86WH2 238 aa22.53■■□□□ 1.2
PPFIA3-211ENST00000602848 TXNDC16Q9P2K2 825 aa22.53■■□□□ 1.2
PPFIA3-211ENST00000602848 GMNCA6NCL1 334 aa22.52■■□□□ 1.2
PPFIA3-211ENST00000602848 FOXO6A8MYZ6 492 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms