RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 KDM7AQ6ZMT4 941 aa18.14■□□□□ 0.49
SHKBP1-227ENST00000602011 PARGQ86W56 976 aa18.14■□□□□ 0.49
SHKBP1-227ENST00000602011 WDR48Q8TAF3 677 aa18.14■□□□□ 0.49
SHKBP1-227ENST00000602011 GLMNQ92990 594 aa18.14■□□□□ 0.49
SHKBP1-227ENST00000602011 TBATAQ96M53 351 aa18.14■□□□□ 0.49
SHKBP1-227ENST00000602011 NAA15Q9BXJ9 866 aaKnown RBP18.14■□□□□ 0.49
SHKBP1-227ENST00000602011 OR12D3Q9UGF7 316 aa18.14■□□□□ 0.49
SHKBP1-227ENST00000602011 AJAP1Q9UKB5 411 aaPredicted RBP18.14■□□□□ 0.49
SHKBP1-227ENST00000602011 ZNF462Q96JM2 2506 aa18.13■□□□□ 0.49
SHKBP1-227ENST00000602011 FFAR2O15552 330 aa18.13■□□□□ 0.49
SHKBP1-227ENST00000602011 GSRP00390 522 aa18.13■□□□□ 0.49
SHKBP1-227ENST00000602011 EEF1GP26641 437 aaKnown RBP18.13■□□□□ 0.49
SHKBP1-227ENST00000602011 RPIAP49247 311 aa18.13■□□□□ 0.49
SHKBP1-227ENST00000602011 PCBP4P57723 403 aaKnown RBP18.13■□□□□ 0.49
SHKBP1-227ENST00000602011 CLDN2P57739 230 aa18.13■□□□□ 0.49
SHKBP1-227ENST00000602011 ARF5P84085 180 aa18.13■□□□□ 0.49
SHKBP1-227ENST00000602011 RAD51Q06609 339 aa18.13■□□□□ 0.49
SHKBP1-227ENST00000602011 MAPK8IP2Q13387 824 aaPredicted RBP18.13■□□□□ 0.49
SHKBP1-227ENST00000602011 ZNF805Q5CZA5 627 aa18.13■□□□□ 0.49
SHKBP1-227ENST00000602011 MIIPQ5JXC2 388 aa18.13■□□□□ 0.49
SHKBP1-227ENST00000602011 TMC6Q7Z403 805 aa18.13■□□□□ 0.49
SHKBP1-227ENST00000602011 PTAR1Q7Z6K3 402 aaPredicted RBP18.13■□□□□ 0.49
SHKBP1-227ENST00000602011 SLC22A18ASQ8N1D0 253 aa18.13■□□□□ 0.49
SHKBP1-227ENST00000602011 CASKIN2Q8WXE0 1202 aa18.13■□□□□ 0.49
SHKBP1-227ENST00000602011 WBP1Q96G27 269 aa18.13■□□□□ 0.49
SHKBP1-227ENST00000602011 NAF1Q96HR8 494 aaKnown RBP18.13■□□□□ 0.49
SHKBP1-227ENST00000602011 MYOCQ99972 504 aa18.13■□□□□ 0.49
SHKBP1-227ENST00000602011 C1QTNF7Q9BXJ2 289 aa18.13■□□□□ 0.49
SHKBP1-227ENST00000602011 DPH1Q9BZG8 443 aa18.13■□□□□ 0.49
SHKBP1-227ENST00000602011 POLR1BQ9H9Y6 1135 aa18.13■□□□□ 0.49
SHKBP1-227ENST00000602011 FZD3Q9NPG1 666 aa18.13■□□□□ 0.49
SHKBP1-227ENST00000602011 SNX10Q9Y5X0 201 aa18.13■□□□□ 0.49
SHKBP1-227ENST00000602011 NEMP1O14524 444 aa18.12■□□□□ 0.49
SHKBP1-227ENST00000602011 SDC4P31431 198 aa18.12■□□□□ 0.49
SHKBP1-227ENST00000602011 SUOXP51687 545 aa18.12■□□□□ 0.49
SHKBP1-227ENST00000602011 YPEL5P62699 121 aa18.12■□□□□ 0.49
SHKBP1-227ENST00000602011 TLE3Q04726 772 aa18.12■□□□□ 0.49
SHKBP1-227ENST00000602011 FZD2Q14332 565 aa18.12■□□□□ 0.49
SHKBP1-227ENST00000602011 ARTNQ5T4W7 220 aa18.12■□□□□ 0.49
SHKBP1-227ENST00000602011 PCSK4Q6UW60 755 aa18.12■□□□□ 0.49
SHKBP1-227ENST00000602011 TRIM72Q6ZMU5 477 aa18.12■□□□□ 0.49
SHKBP1-227ENST00000602011 STRADAQ7RTN6 431 aa18.12■□□□□ 0.49
SHKBP1-227ENST00000602011 FAM131BQ86XD5 332 aa18.12■□□□□ 0.49
SHKBP1-227ENST00000602011 ZNF843Q8N446 348 aa18.12■□□□□ 0.49
SHKBP1-227ENST00000602011 COL26A1Q96A83 441 aa18.12■□□□□ 0.49
SHKBP1-227ENST00000602011 CCDC97Q96F63 343 aaPredicted RBP18.12■□□□□ 0.49
SHKBP1-227ENST00000602011 CFAP57Q96MR6 1250 aa18.12■□□□□ 0.49
SHKBP1-227ENST00000602011 LGMNQ99538 433 aa18.12■□□□□ 0.49
SHKBP1-227ENST00000602011 TMEM248Q9NWD8 314 aa18.12■□□□□ 0.49
SHKBP1-227ENST00000602011 DONSONQ9NYP3 566 aa18.12■□□□□ 0.49
SHKBP1-227ENST00000602011 SPASTQ9UBP0 616 aa18.12■□□□□ 0.49
SHKBP1-227ENST00000602011 FHOD1Q9Y613 1164 aa18.12■□□□□ 0.49
SHKBP1-227ENST00000602011 POM121BA6NF01 834 aa18.11■□□□□ 0.49
SHKBP1-227ENST00000602011 C16orf96A6NNT2 1141 aa18.11■□□□□ 0.49
SHKBP1-227ENST00000602011 GOLGA8SH3BPF8 625 aa18.11■□□□□ 0.49
SHKBP1-227ENST00000602011 PES1O00541 588 aaKnown RBP18.11■□□□□ 0.49
SHKBP1-227ENST00000602011 PNMA6AP0CW24 399 aaPredicted RBP18.11■□□□□ 0.49
SHKBP1-227ENST00000602011 PLA2G2AP14555 144 aa18.11■□□□□ 0.49
SHKBP1-227ENST00000602011 MMP8P22894 467 aa18.11■□□□□ 0.49
SHKBP1-227ENST00000602011 MLLT3P42568 568 aaPredicted RBP18.11■□□□□ 0.49
SHKBP1-227ENST00000602011 NOMO3P69849 1222 aa18.11■□□□□ 0.49
SHKBP1-227ENST00000602011 TAF3Q5VWG9 929 aa18.11■□□□□ 0.49
SHKBP1-227ENST00000602011 NOP9Q86U38 636 aaKnown RBP18.11■□□□□ 0.49
SHKBP1-227ENST00000602011 SPACA3Q8IXA5 215 aa18.11■□□□□ 0.49
SHKBP1-227ENST00000602011 DRC7Q8IY82 874 aa18.11■□□□□ 0.49
SHKBP1-227ENST00000602011 ZNF548Q8NEK5 533 aaPredicted RBP18.11■□□□□ 0.49
SHKBP1-227ENST00000602011 OR2AP1Q8NGE2 309 aa18.11■□□□□ 0.49
SHKBP1-227ENST00000602011 MAPK15Q8TD08 544 aa18.11■□□□□ 0.49
SHKBP1-227ENST00000602011 EPS8L1Q8TE68 723 aa18.11■□□□□ 0.49
SHKBP1-227ENST00000602011 ARHGEF2Q92974 986 aaKnown RBP18.11■□□□□ 0.49
SHKBP1-227ENST00000602011 HIC2Q96JB3 615 aa18.11■□□□□ 0.49
SHKBP1-227ENST00000602011 IL12RB2Q99665 862 aa18.11■□□□□ 0.49
SHKBP1-227ENST00000602011 THSD1Q9NS62 852 aa18.11■□□□□ 0.49
SHKBP1-227ENST00000602011 PCDHB1Q9Y5F3 818 aa18.11■□□□□ 0.49
SHKBP1-227ENST00000602011 TRPM6Q9BX84 2022 aa18.1■□□□□ 0.49
SHKBP1-227ENST00000602011 EME2A4GXA9 379 aaPredicted RBP18.1■□□□□ 0.49
SHKBP1-227ENST00000602011 F8VZ95 297 aa18.1■□□□□ 0.49
SHKBP1-227ENST00000602011 AQP9O43315 295 aa18.1■□□□□ 0.49
SHKBP1-227ENST00000602011 USP12O75317 370 aa18.1■□□□□ 0.49
SHKBP1-227ENST00000602011 TCEA3O75764 348 aa18.1■□□□□ 0.49
SHKBP1-227ENST00000602011 TPM2P07951 284 aa18.1■□□□□ 0.49
SHKBP1-227ENST00000602011 MYF5P13349 255 aa18.1■□□□□ 0.49
SHKBP1-227ENST00000602011 JUNDP17535 347 aa18.1■□□□□ 0.49
SHKBP1-227ENST00000602011 PTPN9P43378 593 aa18.1■□□□□ 0.49
SHKBP1-227ENST00000602011 PFN3P60673 137 aa18.1■□□□□ 0.49
SHKBP1-227ENST00000602011 CXADRP78310 365 aa18.1■□□□□ 0.49
SHKBP1-227ENST00000602011 CDR2Q01850 454 aa18.1■□□□□ 0.49
SHKBP1-227ENST00000602011 RHDQ02161 417 aa18.1■□□□□ 0.49
SHKBP1-227ENST00000602011 MYLK3Q32MK0 819 aa18.1■□□□□ 0.49
SHKBP1-227ENST00000602011 INO80DQ53TQ3 878 aaPredicted RBP18.1■□□□□ 0.49
SHKBP1-227ENST00000602011 MANEALQ5VSG8 457 aa18.1■□□□□ 0.49
SHKBP1-227ENST00000602011 RWDD4Q6NW29 188 aaKnown RBP18.1■□□□□ 0.49
SHKBP1-227ENST00000602011 PARS2Q7L3T8 475 aaKnown RBP18.1■□□□□ 0.49
SHKBP1-227ENST00000602011 NLRP14Q86W24 1093 aa18.1■□□□□ 0.49
SHKBP1-227ENST00000602011 SDR16C5Q8N3Y7 309 aa18.1■□□□□ 0.49
SHKBP1-227ENST00000602011 RYBPQ8N488 228 aaPredicted RBP18.1■□□□□ 0.49
SHKBP1-227ENST00000602011 IFI44Q8TCB0 444 aa18.1■□□□□ 0.49
SHKBP1-227ENST00000602011 HCAR2Q8TDS4 363 aa18.1■□□□□ 0.49
SHKBP1-227ENST00000602011 CPA5Q8WXQ8 436 aa18.1■□□□□ 0.49
SHKBP1-227ENST00000602011 CENPIQ92674 756 aaPredicted RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms