RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 SH3GL2Q99962 352 aa10.26□□□□□ -0.77
UPF1-213ENST00000601981 TMEM121Q9BTD3 319 aa10.26□□□□□ -0.77
UPF1-213ENST00000601981 SP110Q9HB58 689 aa10.26□□□□□ -0.77
UPF1-213ENST00000601981 NDFIP2Q9NV92 336 aa10.26□□□□□ -0.77
UPF1-213ENST00000601981 DLGAP2Q9P1A6 1054 aa10.26□□□□□ -0.77
UPF1-213ENST00000601981 SAE1Q9UBE0 346 aaPredicted RBP10.26□□□□□ -0.77
UPF1-213ENST00000601981 VPS51Q9UID3 782 aa10.26□□□□□ -0.77
UPF1-213ENST00000601981 ANAPC5Q9UJX4 755 aa10.26□□□□□ -0.77
UPF1-213ENST00000601981 INTS6Q9UL03 887 aaKnown RBP10.26□□□□□ -0.77
UPF1-213ENST00000601981 FARP1Q9Y4F1 1045 aaPredicted RBP10.26□□□□□ -0.77
UPF1-213ENST00000601981 OR51B4Q9Y5P0 310 aa10.26□□□□□ -0.77
UPF1-213ENST00000601981 RAD54BQ9Y620 910 aa10.26□□□□□ -0.77
UPF1-213ENST00000601981 STON1Q9Y6Q2 735 aa10.26□□□□□ -0.77
UPF1-213ENST00000601981 EDDM13A0A1B0GTR0 161 aa10.25□□□□□ -0.77
UPF1-213ENST00000601981 BCLAF3A2AJT9 711 aaKnown RBP10.25□□□□□ -0.77
UPF1-213ENST00000601981 HACD1B0YJ81 288 aa10.25□□□□□ -0.77
UPF1-213ENST00000601981 H3BQF6 201 aa10.25□□□□□ -0.77
UPF1-213ENST00000601981 AGPSO00116 658 aa10.25□□□□□ -0.77
UPF1-213ENST00000601981 SMAPO00193 183 aa10.25□□□□□ -0.77
UPF1-213ENST00000601981 TP73O15350 636 aa10.25□□□□□ -0.77
UPF1-213ENST00000601981 KDELR3O43731 214 aa10.25□□□□□ -0.77
UPF1-213ENST00000601981 OPA1O60313 960 aa10.25□□□□□ -0.77
UPF1-213ENST00000601981 RNASEH1O60930 286 aaKnown RBP10.25□□□□□ -0.77
UPF1-213ENST00000601981 PAPSS2O95340 614 aaPredicted RBP10.25□□□□□ -0.77
UPF1-213ENST00000601981 OAS2P29728 719 aaKnown RBP10.25□□□□□ -0.77
UPF1-213ENST00000601981 STIP1P31948 543 aaKnown RBP10.25□□□□□ -0.77
UPF1-213ENST00000601981 IL12RB1P42701 662 aa10.25□□□□□ -0.77
UPF1-213ENST00000601981 RECQLP46063 649 aaPredicted RBP10.25□□□□□ -0.77
UPF1-213ENST00000601981 VPS41P49754 854 aa10.25□□□□□ -0.77
UPF1-213ENST00000601981 ITGA8P53708 1063 aa10.25□□□□□ -0.77
UPF1-213ENST00000601981 NRLP54845 237 aa10.25□□□□□ -0.77
UPF1-213ENST00000601981 GPS1Q13098 491 aa10.25□□□□□ -0.77
UPF1-213ENST00000601981 SERINC3Q13530 473 aa10.25□□□□□ -0.77
UPF1-213ENST00000601981 MORF4L2Q15014 288 aa10.25□□□□□ -0.77
UPF1-213ENST00000601981 PAFAH1B3Q15102 231 aaKnown RBP10.25□□□□□ -0.77
UPF1-213ENST00000601981 UAP1Q16222 522 aaPredicted RBP10.25□□□□□ -0.77
UPF1-213ENST00000601981 CRY1Q16526 586 aa10.25□□□□□ -0.77
UPF1-213ENST00000601981 KCTD19Q17RG1 926 aaPredicted RBP10.25□□□□□ -0.77
UPF1-213ENST00000601981 P3H1Q32P28 736 aa10.25□□□□□ -0.77
UPF1-213ENST00000601981 ACCSLQ4AC99 568 aa10.25□□□□□ -0.77
UPF1-213ENST00000601981 ARTNQ5T4W7 220 aa10.25□□□□□ -0.77
UPF1-213ENST00000601981 TMCO4Q5TGY1 634 aa10.25□□□□□ -0.77
UPF1-213ENST00000601981 EMC10Q5UCC4 262 aa10.25□□□□□ -0.77
UPF1-213ENST00000601981 NCBP2-AS2Q69YL0 99 aa10.25□□□□□ -0.77
UPF1-213ENST00000601981 TIGD7Q6NT04 549 aaPredicted RBP10.25□□□□□ -0.77
UPF1-213ENST00000601981 HIBCHQ6NVY1 386 aaPredicted RBP10.25□□□□□ -0.77
UPF1-213ENST00000601981 DARS2Q6PI48 645 aaKnown RBP10.25□□□□□ -0.77
UPF1-213ENST00000601981 NPNTQ6UXI9 565 aa10.25□□□□□ -0.77
UPF1-213ENST00000601981 PCGF5Q86SE9 256 aa10.25□□□□□ -0.77
UPF1-213ENST00000601981 SFTPA1Q8IWL2 248 aa10.25□□□□□ -0.77
UPF1-213ENST00000601981 CAMKK1Q8N5S9 505 aa10.25□□□□□ -0.77
UPF1-213ENST00000601981 OR52K2Q8NGK3 314 aa10.25□□□□□ -0.77
UPF1-213ENST00000601981 SORCS1Q8WY21 1168 aa10.25□□□□□ -0.77
UPF1-213ENST00000601981 ALG14Q96F25 216 aa10.25□□□□□ -0.77
UPF1-213ENST00000601981 HMCESQ96FZ2 354 aa10.25□□□□□ -0.77
UPF1-213ENST00000601981 CELF6Q96J87 481 aaKnown RBP10.25□□□□□ -0.77
UPF1-213ENST00000601981 RPL10LQ96L21 214 aaKnown RBP10.25□□□□□ -0.77
UPF1-213ENST00000601981 ZIM3Q96PE6 472 aa10.25□□□□□ -0.77
UPF1-213ENST00000601981 GABRG3Q99928 467 aa10.25□□□□□ -0.77
UPF1-213ENST00000601981 ACE2Q9BYF1 805 aaPredicted RBP10.25□□□□□ -0.77
UPF1-213ENST00000601981 PHACTR1Q9C0D0 580 aa10.25□□□□□ -0.77
UPF1-213ENST00000601981 CEP44Q9C0F1 390 aa10.25□□□□□ -0.77
UPF1-213ENST00000601981 CACNA2D2Q9NY47 1150 aa10.25□□□□□ -0.77
UPF1-213ENST00000601981 SHOC2Q9UQ13 582 aa10.25□□□□□ -0.77
UPF1-213ENST00000601981 HS3ST2Q9Y278 367 aa10.25□□□□□ -0.77
UPF1-213ENST00000601981 ANKRD36A6QL64 1941 aa10.25□□□□□ -0.77
UPF1-213ENST00000601981 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.24□□□□□ -0.77
UPF1-213ENST00000601981 H7C0C1 242 aa10.24□□□□□ -0.77
UPF1-213ENST00000601981 PPP1R12AO14974 1030 aaPredicted RBP10.24□□□□□ -0.77
UPF1-213ENST00000601981 SNAP91O60641 907 aa10.24□□□□□ -0.77
UPF1-213ENST00000601981 NEBLO76041 1014 aa10.24□□□□□ -0.77
UPF1-213ENST00000601981 APBB3O95704 486 aa10.24□□□□□ -0.77
UPF1-213ENST00000601981 IFNB1P01574 187 aa10.24□□□□□ -0.77
UPF1-213ENST00000601981 ACVRL1P37023 503 aa10.24□□□□□ -0.77
UPF1-213ENST00000601981 WASP42768 502 aa10.24□□□□□ -0.77
UPF1-213ENST00000601981 CTSOP43234 321 aaPredicted RBP10.24□□□□□ -0.77
UPF1-213ENST00000601981 ATP5OP48047 213 aa10.24□□□□□ -0.77
UPF1-213ENST00000601981 SERPINH1P50454 418 aaKnown RBP10.24□□□□□ -0.77
UPF1-213ENST00000601981 PAPOLAP51003 745 aaKnown RBP10.24□□□□□ -0.77
UPF1-213ENST00000601981 PMS2P54278 862 aa10.24□□□□□ -0.77
UPF1-213ENST00000601981 GDF10P55107 478 aa10.24□□□□□ -0.77
UPF1-213ENST00000601981 IL10RBQ08334 325 aa10.24□□□□□ -0.77
UPF1-213ENST00000601981 SFSWAPQ12872 951 aaKnown RBP10.24□□□□□ -0.77
UPF1-213ENST00000601981 ENPP2Q13822 863 aa10.24□□□□□ -0.77
UPF1-213ENST00000601981 RFTN1Q14699 578 aaPredicted RBP10.24□□□□□ -0.77
UPF1-213ENST00000601981 PDK1Q15118 436 aa10.24□□□□□ -0.77
UPF1-213ENST00000601981 PTPRNQ16849 979 aa10.24□□□□□ -0.77
UPF1-213ENST00000601981 HNRNPA1L2Q32P51 320 aaKnown RBP10.24□□□□□ -0.77
UPF1-213ENST00000601981 INO80DQ53TQ3 878 aaPredicted RBP10.24□□□□□ -0.77
UPF1-213ENST00000601981 SLC45A4Q5BKX6 768 aa10.24□□□□□ -0.77
UPF1-213ENST00000601981 C4orf22Q6V702 233 aa10.24□□□□□ -0.77
UPF1-213ENST00000601981 TRMT10CQ7L0Y3 403 aaKnown RBP10.24□□□□□ -0.77
UPF1-213ENST00000601981 DSG4Q86SJ6 1040 aa10.24□□□□□ -0.77
UPF1-213ENST00000601981 HOOK3Q86VS8 718 aa10.24□□□□□ -0.77
UPF1-213ENST00000601981 ZCCHC9Q8N567 271 aaKnown RBP10.24□□□□□ -0.77
UPF1-213ENST00000601981 SH2D3CQ8N5H7 860 aa10.24□□□□□ -0.77
UPF1-213ENST00000601981 NPWQ8N729 165 aa10.24□□□□□ -0.77
UPF1-213ENST00000601981 GOLGA6L1Q8N7Z2 621 aa10.24□□□□□ -0.77
UPF1-213ENST00000601981 GLIS1Q8NBF1 620 aa10.24□□□□□ -0.77
UPF1-213ENST00000601981 UBLCP1Q8WVY7 318 aaPredicted RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms