RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 PCSK7Q16549 785 aa18.25■□□□□ 0.51
VRK3-225ENST00000601912 PITRM1Q5JRX3 1037 aa18.25■□□□□ 0.51
VRK3-225ENST00000601912 KDELC1Q6UW63 502 aa18.25■□□□□ 0.51
VRK3-225ENST00000601912 ATP2A3Q93084 1043 aa18.25■□□□□ 0.51
VRK3-225ENST00000601912 LMLNQ96KR4 655 aa18.25■□□□□ 0.51
VRK3-225ENST00000601912 MRGPRX2Q96LB1 330 aa18.25■□□□□ 0.51
VRK3-225ENST00000601912 XPO6Q96QU8 1125 aaKnown RBP18.25■□□□□ 0.51
VRK3-225ENST00000601912 IL22Q9GZX6 179 aa18.25■□□□□ 0.51
VRK3-225ENST00000601912 GGA2Q9UJY4 613 aa18.25■□□□□ 0.51
VRK3-225ENST00000601912 MAGEB16A2A368 324 aa18.24■□□□□ 0.51
VRK3-225ENST00000601912 GOLGA8KD6RF30 607 aa18.24■□□□□ 0.51
VRK3-225ENST00000601912 RASGRF2O14827 1237 aa18.24■□□□□ 0.51
VRK3-225ENST00000601912 CD160O95971 181 aa18.24■□□□□ 0.51
VRK3-225ENST00000601912 AGTP01019 485 aa18.24■□□□□ 0.51
VRK3-225ENST00000601912 CYP17A1P05093 508 aa18.24■□□□□ 0.51
VRK3-225ENST00000601912 MMP2P08253 660 aa18.24■□□□□ 0.51
VRK3-225ENST00000601912 ADH5P11766 374 aa18.24■□□□□ 0.51
VRK3-225ENST00000601912 PABPC1P11940 636 aaKnown RBP18.24■□□□□ 0.51
VRK3-225ENST00000601912 SKOR1P84550 965 aa18.24■□□□□ 0.51
VRK3-225ENST00000601912 SULT2A1Q06520 285 aa18.24■□□□□ 0.51
VRK3-225ENST00000601912 NSUN2Q08J23 767 aaKnown RBP eCLIP18.24■□□□□ 0.51
VRK3-225ENST00000601912 ADGRE1Q14246 886 aa18.24■□□□□ 0.51
VRK3-225ENST00000601912 PDGFRLQ15198 375 aa18.24■□□□□ 0.51
VRK3-225ENST00000601912 SLC14A2Q15849 920 aa18.24■□□□□ 0.51
VRK3-225ENST00000601912 TANGO2Q6ICL3 276 aa18.24■□□□□ 0.51
VRK3-225ENST00000601912 MPP5Q8N3R9 675 aa18.24■□□□□ 0.51
VRK3-225ENST00000601912 TADA1Q96BN2 335 aa18.24■□□□□ 0.51
VRK3-225ENST00000601912 CENPHQ9H3R5 247 aa18.24■□□□□ 0.51
VRK3-225ENST00000601912 SCUBE2Q9NQ36 999 aa18.24■□□□□ 0.51
VRK3-225ENST00000601912 MYOFQ9NZM1 2061 aa18.23■□□□□ 0.51
VRK3-225ENST00000601912 INSIG1O15503 277 aa18.23■□□□□ 0.51
VRK3-225ENST00000601912 HOXC11O43248 304 aaPredicted RBP18.23■□□□□ 0.51
VRK3-225ENST00000601912 TCEA3O75764 348 aa18.23■□□□□ 0.51
VRK3-225ENST00000601912 PGAM1P18669 254 aa18.23■□□□□ 0.51
VRK3-225ENST00000601912 FCARP24071 287 aa18.23■□□□□ 0.51
VRK3-225ENST00000601912 STX2P32856 288 aa18.23■□□□□ 0.51
VRK3-225ENST00000601912 SERPINH1P50454 418 aaKnown RBP18.23■□□□□ 0.51
VRK3-225ENST00000601912 SCNN1BP51168 640 aa18.23■□□□□ 0.51
VRK3-225ENST00000601912 RHOAP61586 193 aa18.23■□□□□ 0.51
VRK3-225ENST00000601912 TRIM68Q6AZZ1 485 aa18.23■□□□□ 0.51
VRK3-225ENST00000601912 RANBP10Q6VN20 620 aa18.23■□□□□ 0.51
VRK3-225ENST00000601912 YAF2Q8IY57 180 aa18.23■□□□□ 0.51
VRK3-225ENST00000601912 IFT43Q96FT9 208 aa18.23■□□□□ 0.51
VRK3-225ENST00000601912 NECTIN4Q96NY8 510 aa18.23■□□□□ 0.51
VRK3-225ENST00000601912 MYADMQ96S97 322 aa18.23■□□□□ 0.51
VRK3-225ENST00000601912 GAS2L1Q99501 681 aaPredicted RBP18.23■□□□□ 0.51
VRK3-225ENST00000601912 PPCSQ9HAB8 311 aa18.23■□□□□ 0.51
VRK3-225ENST00000601912 SYBUQ9NX95 663 aa18.23■□□□□ 0.51
VRK3-225ENST00000601912 INTS6Q9UL03 887 aaKnown RBP18.23■□□□□ 0.51
VRK3-225ENST00000601912 EXOC1LA0A1B0GW35 172 aa18.22■□□□□ 0.51
VRK3-225ENST00000601912 TLDC2A0PJX2 215 aa18.22■□□□□ 0.51
VRK3-225ENST00000601912 TTC24A2A3L6 582 aaPredicted RBP18.22■□□□□ 0.51
VRK3-225ENST00000601912 LAMP2P13473 410 aa18.22■□□□□ 0.51
VRK3-225ENST00000601912 LTBRP36941 435 aa18.22■□□□□ 0.51
VRK3-225ENST00000601912 CRADDP78560 199 aa18.22■□□□□ 0.51
VRK3-225ENST00000601912 COL19A1Q14993 1142 aa18.22■□□□□ 0.51
VRK3-225ENST00000601912 KLHL38Q2WGJ6 581 aa18.22■□□□□ 0.51
VRK3-225ENST00000601912 RALGPS1Q5JS13 557 aa18.22■□□□□ 0.51
VRK3-225ENST00000601912 KDELC2Q7Z4H8 507 aa18.22■□□□□ 0.51
VRK3-225ENST00000601912 MFSD6LQ8IWD5 586 aa18.22■□□□□ 0.51
VRK3-225ENST00000601912 AHI1Q8N157 1196 aa18.22■□□□□ 0.51
VRK3-225ENST00000601912 MICALL1Q8N3F8 863 aa18.22■□□□□ 0.51
VRK3-225ENST00000601912 NAT16Q8N8M0 369 aa18.22■□□□□ 0.51
VRK3-225ENST00000601912 FBF1Q8TES7 1133 aa18.22■□□□□ 0.51
VRK3-225ENST00000601912 MSLNLQ96KJ4 702 aa18.22■□□□□ 0.51
VRK3-225ENST00000601912 NUDCD1Q96RS6 583 aa18.22■□□□□ 0.51
VRK3-225ENST00000601912 EBF3Q9H4W6 596 aa18.22■□□□□ 0.51
VRK3-225ENST00000601912 TMBIM4Q9HC24 238 aa18.22■□□□□ 0.51
VRK3-225ENST00000601912 SLC25A13Q9UJS0 675 aa18.22■□□□□ 0.51
VRK3-225ENST00000601912 SMIM23A6NLE4 172 aa18.22■□□□□ 0.51
VRK3-225ENST00000601912 H3BQF6 201 aa18.22■□□□□ 0.51
VRK3-225ENST00000601912 ATP9BO43861 1147 aa18.22■□□□□ 0.51
VRK3-225ENST00000601912 MT-CO1P00395 513 aa18.22■□□□□ 0.51
VRK3-225ENST00000601912 EPOP01588 193 aa18.22■□□□□ 0.51
VRK3-225ENST00000601912 POLBP06746 335 aa18.22■□□□□ 0.51
VRK3-225ENST00000601912 CR2P20023 1033 aa18.22■□□□□ 0.51
VRK3-225ENST00000601912 NR1H3Q13133 447 aa18.22■□□□□ 0.51
VRK3-225ENST00000601912 LONRF1Q17RB8 773 aa18.22■□□□□ 0.51
VRK3-225ENST00000601912 FUT11Q495W5 492 aa18.22■□□□□ 0.51
VRK3-225ENST00000601912 CERCAMQ5T4B2 595 aa18.22■□□□□ 0.51
VRK3-225ENST00000601912 ASTLQ6HA08 431 aaPredicted RBP18.22■□□□□ 0.51
VRK3-225ENST00000601912 VITQ6UXI7 678 aa18.22■□□□□ 0.51
VRK3-225ENST00000601912 UNC5AQ6ZN44 842 aa18.22■□□□□ 0.51
VRK3-225ENST00000601912 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.22■□□□□ 0.51
VRK3-225ENST00000601912 GSDMBQ8TAX9 411 aa18.22■□□□□ 0.51
VRK3-225ENST00000601912 ASIC4Q96FT7 647 aa18.22■□□□□ 0.51
VRK3-225ENST00000601912 FEM1CQ96JP0 617 aa18.22■□□□□ 0.51
VRK3-225ENST00000601912 ZFYVE19Q96K21 471 aa18.22■□□□□ 0.51
VRK3-225ENST00000601912 EXOC2Q96KP1 924 aa18.22■□□□□ 0.51
VRK3-225ENST00000601912 CYTH2Q99418 400 aa18.22■□□□□ 0.51
VRK3-225ENST00000601912 FAM83CQ9BQN1 747 aa18.22■□□□□ 0.51
VRK3-225ENST00000601912 ACSS3Q9H6R3 686 aa18.22■□□□□ 0.51
VRK3-225ENST00000601912 ARNT2Q9HBZ2 717 aa18.22■□□□□ 0.51
VRK3-225ENST00000601912 NOD2Q9HC29 1040 aa18.22■□□□□ 0.51
VRK3-225ENST00000601912 RABGEF1Q9UJ41 708 aa18.22■□□□□ 0.51
VRK3-225ENST00000601912 FCF1Q9Y324 198 aaKnown RBP18.22■□□□□ 0.51
VRK3-225ENST00000601912 TCRBV9S1A1TA0A576 114 aa18.21■□□□□ 0.51
VRK3-225ENST00000601912 ARSAP15289 507 aa18.21■□□□□ 0.51
VRK3-225ENST00000601912 TPH1P17752 444 aa18.21■□□□□ 0.51
VRK3-225ENST00000601912 SLCO1A2P46721 670 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 673.3 ms