RNA–Protein interactions for RNA: ENST00000601373.5

IRF3-229, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-229ENST00000601373 MT-CYBP00156 380 aaPredicted RBP13.9□□□□□ -0.18
IRF3-229ENST00000601373 PENKP01210 267 aaPredicted RBP13.9□□□□□ -0.18
IRF3-229ENST00000601373 EPOP01588 193 aa13.9□□□□□ -0.18
IRF3-229ENST00000601373 ADRA1AP35348 466 aa13.9□□□□□ -0.18
IRF3-229ENST00000601373 CSKP41240 450 aa13.9□□□□□ -0.18
IRF3-229ENST00000601373 WNT3AP56704 352 aa13.9□□□□□ -0.18
IRF3-229ENST00000601373 SLC20A2Q08357 652 aa13.9□□□□□ -0.18
IRF3-229ENST00000601373 HYAL1Q12794 435 aa13.9□□□□□ -0.18
IRF3-229ENST00000601373 NR1H3Q13133 447 aa13.9□□□□□ -0.18
IRF3-229ENST00000601373 MTM1Q13496 603 aa13.9□□□□□ -0.18
IRF3-229ENST00000601373 CBX2Q14781 532 aaPredicted RBP13.9□□□□□ -0.18
IRF3-229ENST00000601373 LONRF1Q17RB8 773 aa13.9□□□□□ -0.18
IRF3-229ENST00000601373 TCEAL5Q5H9L2 206 aa13.9□□□□□ -0.18
IRF3-229ENST00000601373 FSCBQ5H9T9 825 aa13.9□□□□□ -0.18
IRF3-229ENST00000601373 STEAP4Q687X5 459 aa13.9□□□□□ -0.18
IRF3-229ENST00000601373 ZNF449Q6P9G9 518 aa13.9□□□□□ -0.18
IRF3-229ENST00000601373 KDELC1Q6UW63 502 aa13.9□□□□□ -0.18
IRF3-229ENST00000601373 RANBP10Q6VN20 620 aa13.9□□□□□ -0.18
IRF3-229ENST00000601373 UNC5AQ6ZN44 842 aa13.9□□□□□ -0.18
IRF3-229ENST00000601373 CAPN12Q6ZSI9 719 aa13.9□□□□□ -0.18
IRF3-229ENST00000601373 PRPF39Q86UA1 669 aaKnown RBP13.9□□□□□ -0.18
IRF3-229ENST00000601373 AGGF1Q8N302 714 aaeCLIP13.9□□□□□ -0.18
IRF3-229ENST00000601373 ARFGAP2Q8N6H7 521 aa13.9□□□□□ -0.18
IRF3-229ENST00000601373 FAM76AQ8TAV0 307 aa13.9□□□□□ -0.18
IRF3-229ENST00000601373 ARRDC2Q8TBH0 407 aa13.9□□□□□ -0.18
IRF3-229ENST00000601373 TADA1Q96BN2 335 aa13.9□□□□□ -0.18
IRF3-229ENST00000601373 ZBTB9Q96C00 473 aa13.9□□□□□ -0.18
IRF3-229ENST00000601373 ALG14Q96F25 216 aa13.9□□□□□ -0.18
IRF3-229ENST00000601373 CFAP36Q96G28 342 aa13.9□□□□□ -0.18
IRF3-229ENST00000601373 ZNF419Q96HQ0 510 aaPredicted RBP13.9□□□□□ -0.18
IRF3-229ENST00000601373 XPO6Q96QU8 1125 aaKnown RBP13.9□□□□□ -0.18
IRF3-229ENST00000601373 MGME1Q9BQP7 344 aa13.9□□□□□ -0.18
IRF3-229ENST00000601373 FICDQ9BVA6 458 aa13.9□□□□□ -0.18
IRF3-229ENST00000601373 ARNT2Q9HBZ2 717 aa13.9□□□□□ -0.18
IRF3-229ENST00000601373 OBP2AQ9NY56 170 aa13.9□□□□□ -0.18
IRF3-229ENST00000601373 GDE1Q9NZC3 331 aa13.9□□□□□ -0.18
IRF3-229ENST00000601373 MARK1Q9P0L2 795 aa13.9□□□□□ -0.18
IRF3-229ENST00000601373 LGALS13Q9UHV8 139 aa13.9□□□□□ -0.18
IRF3-229ENST00000601373 TCRBV9S1A1TA0A576 114 aa13.89□□□□□ -0.19
IRF3-229ENST00000601373 SMIM23A6NLE4 172 aa13.89□□□□□ -0.19
IRF3-229ENST00000601373 POLR3GO15318 223 aaPredicted RBP13.89□□□□□ -0.19
IRF3-229ENST00000601373 USP12O75317 370 aa13.89□□□□□ -0.19
IRF3-229ENST00000601373 POLBP06746 335 aa13.89□□□□□ -0.19
IRF3-229ENST00000601373 SERPINF2P08697 491 aa13.89□□□□□ -0.19
IRF3-229ENST00000601373 PRKCHP24723 683 aa13.89□□□□□ -0.19
IRF3-229ENST00000601373 MZF1P28698 734 aaPredicted RBP13.89□□□□□ -0.19
IRF3-229ENST00000601373 CD86P42081 329 aa13.89□□□□□ -0.19
IRF3-229ENST00000601373 MSH2P43246 934 aa13.89□□□□□ -0.19
IRF3-229ENST00000601373 MAXP61244 160 aa13.89□□□□□ -0.19
IRF3-229ENST00000601373 ARF5P84085 180 aa13.89□□□□□ -0.19
IRF3-229ENST00000601373 SKOR1P84550 965 aa13.89□□□□□ -0.19
IRF3-229ENST00000601373 DSC2Q02487 901 aa13.89□□□□□ -0.19
IRF3-229ENST00000601373 NSUN2Q08J23 767 aaKnown RBP eCLIP13.89□□□□□ -0.19
IRF3-229ENST00000601373 NIPAL4Q0D2K0 466 aa13.89□□□□□ -0.19
IRF3-229ENST00000601373 FRG1Q14331 258 aaKnown RBP13.89□□□□□ -0.19
IRF3-229ENST00000601373 CYTH1Q15438 398 aa13.89□□□□□ -0.19
IRF3-229ENST00000601373 TNFAIP8L3Q5GJ75 292 aa13.89□□□□□ -0.19
IRF3-229ENST00000601373 RALGPS1Q5JS13 557 aa13.89□□□□□ -0.19
IRF3-229ENST00000601373 SPANXN3Q5MJ09 141 aa13.89□□□□□ -0.19
IRF3-229ENST00000601373 KCTD16Q68DU8 428 aa13.89□□□□□ -0.19
IRF3-229ENST00000601373 POTEHQ6S545 545 aa13.89□□□□□ -0.19
IRF3-229ENST00000601373 ADGRG2Q8IZP9 1017 aa13.89□□□□□ -0.19
IRF3-229ENST00000601373 MPP5Q8N3R9 675 aa13.89□□□□□ -0.19
IRF3-229ENST00000601373 PGBD5Q8N414 524 aa13.89□□□□□ -0.19
IRF3-229ENST00000601373 PTCD2Q8WV60 388 aaKnown RBP13.89□□□□□ -0.19
IRF3-229ENST00000601373 SMARCD2Q92925 531 aa13.89□□□□□ -0.19
IRF3-229ENST00000601373 TTC17Q96AE7 1141 aa13.89□□□□□ -0.19
IRF3-229ENST00000601373 TLCD1Q96CP7 247 aa13.89□□□□□ -0.19
IRF3-229ENST00000601373 MRGPRX2Q96LB1 330 aa13.89□□□□□ -0.19
IRF3-229ENST00000601373 SEMA3CQ99985 751 aa13.89□□□□□ -0.19
IRF3-229ENST00000601373 SLC2A11Q9BYW1 496 aa13.89□□□□□ -0.19
IRF3-229ENST00000601373 SPHK2Q9NRA0 654 aa13.89□□□□□ -0.19
IRF3-229ENST00000601373 SYBUQ9NX95 663 aa13.89□□□□□ -0.19
IRF3-229ENST00000601373 NOVA2Q9UNW9 492 aaKnown RBP13.89□□□□□ -0.19
IRF3-229ENST00000601373 MUC6Q6W4X9 2439 aa13.88□□□□□ -0.19
IRF3-229ENST00000601373 FAM237BA0A1B0GVD1 139 aa13.88□□□□□ -0.19
IRF3-229ENST00000601373 PRR33A8MZF0 331 aa13.88□□□□□ -0.19
IRF3-229ENST00000601373 POC1B-GALNT4F8VUJ3 575 aa13.88□□□□□ -0.19
IRF3-229ENST00000601373 ALDH1A2O94788 518 aa13.88□□□□□ -0.19
IRF3-229ENST00000601373 GLP2RO95838 553 aa13.88□□□□□ -0.19
IRF3-229ENST00000601373 MMP2P08253 660 aa13.88□□□□□ -0.19
IRF3-229ENST00000601373 GLDCP23378 1020 aa13.88□□□□□ -0.19
IRF3-229ENST00000601373 SLCO1A2P46721 670 aa13.88□□□□□ -0.19
IRF3-229ENST00000601373 CBX1P83916 185 aa13.88□□□□□ -0.19
IRF3-229ENST00000601373 LMAN2Q12907 356 aa13.88□□□□□ -0.19
IRF3-229ENST00000601373 ADAM15Q13444 863 aa13.88□□□□□ -0.19
IRF3-229ENST00000601373 NAB1Q13506 487 aa13.88□□□□□ -0.19
IRF3-229ENST00000601373 DMC1Q14565 340 aa13.88□□□□□ -0.19
IRF3-229ENST00000601373 PCID2Q5JVF3 399 aa13.88□□□□□ -0.19
IRF3-229ENST00000601373 ATAT1Q5SQI0 421 aa13.88□□□□□ -0.19
IRF3-229ENST00000601373 EMC10Q5UCC4 262 aa13.88□□□□□ -0.19
IRF3-229ENST00000601373 LEKR1Q6ZMV7 388 aa13.88□□□□□ -0.19
IRF3-229ENST00000601373 TAOK1Q7L7X3 1001 aa13.88□□□□□ -0.19
IRF3-229ENST00000601373 TMEM25Q86YD3 366 aa13.88□□□□□ -0.19
IRF3-229ENST00000601373 NPAS3Q8IXF0 933 aa13.88□□□□□ -0.19
IRF3-229ENST00000601373 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.88□□□□□ -0.19
IRF3-229ENST00000601373 CDKL2Q92772 493 aa13.88□□□□□ -0.19
IRF3-229ENST00000601373 E2F7Q96AV8 911 aa13.88□□□□□ -0.19
IRF3-229ENST00000601373 FEM1CQ96JP0 617 aa13.88□□□□□ -0.19
IRF3-229ENST00000601373 NUDCD1Q96RS6 583 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms