RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 SAE1Q9UBE0 346 aaPredicted RBP11.86□□□□□ -0.51
CHMP2A-207ENST00000600804 ANGPTL2Q9UKU9 493 aa11.86□□□□□ -0.51
CHMP2A-207ENST00000600804 R3HDM2Q9Y2K5 976 aaKnown RBP11.86□□□□□ -0.51
CHMP2A-207ENST00000600804 MRFAP1Q9Y605 127 aa11.86□□□□□ -0.51
CHMP2A-207ENST00000600804 CACNA1EQ15878 2313 aa11.86□□□□□ -0.51
CHMP2A-207ENST00000600804 ANTXRLA6NF34 631 aa11.85□□□□□ -0.51
CHMP2A-207ENST00000600804 K7EQS6 105 aa11.85□□□□□ -0.51
CHMP2A-207ENST00000600804 PDE2AO00408 941 aaPredicted RBP11.85□□□□□ -0.51
CHMP2A-207ENST00000600804 ATP9BO43861 1147 aa11.85□□□□□ -0.51
CHMP2A-207ENST00000600804 URI1O94763 535 aaPredicted RBP11.85□□□□□ -0.51
CHMP2A-207ENST00000600804 CD160O95971 181 aa11.85□□□□□ -0.51
CHMP2A-207ENST00000600804 ITGAVP06756 1048 aa11.85□□□□□ -0.51
CHMP2A-207ENST00000600804 C7P10643 843 aa11.85□□□□□ -0.51
CHMP2A-207ENST00000600804 RBP3P10745 1247 aa11.85□□□□□ -0.51
CHMP2A-207ENST00000600804 STIP1P31948 543 aaKnown RBP11.85□□□□□ -0.51
CHMP2A-207ENST00000600804 HSPA9P38646 679 aaKnown RBP11.85□□□□□ -0.51
CHMP2A-207ENST00000600804 KIR2DL1P43626 348 aaPredicted RBP11.85□□□□□ -0.51
CHMP2A-207ENST00000600804 FNTAP49354 379 aa11.85□□□□□ -0.51
CHMP2A-207ENST00000600804 SERPINH1P50454 418 aaKnown RBP11.85□□□□□ -0.51
CHMP2A-207ENST00000600804 EIF3EP60228 445 aaKnown RBP11.85□□□□□ -0.51
CHMP2A-207ENST00000600804 MRPS21P82921 87 aaKnown RBP11.85□□□□□ -0.51
CHMP2A-207ENST00000600804 SHC2P98077 582 aa11.85□□□□□ -0.51
CHMP2A-207ENST00000600804 KDSRQ06136 332 aa11.85□□□□□ -0.51
CHMP2A-207ENST00000600804 CKAP4Q07065 602 aaKnown RBP11.85□□□□□ -0.51
CHMP2A-207ENST00000600804 BYSLQ13895 437 aaKnown RBP11.85□□□□□ -0.51
CHMP2A-207ENST00000600804 PTPRNQ16849 979 aa11.85□□□□□ -0.51
CHMP2A-207ENST00000600804 AASDHQ4L235 1098 aaPredicted RBP11.85□□□□□ -0.51
CHMP2A-207ENST00000600804 STPG1Q5TH74 334 aa11.85□□□□□ -0.51
CHMP2A-207ENST00000600804 MYO19Q96H55 970 aa11.85□□□□□ -0.51
CHMP2A-207ENST00000600804 MRGPRX3Q96LB0 322 aa11.85□□□□□ -0.51
CHMP2A-207ENST00000600804 LGMNQ99538 433 aa11.85□□□□□ -0.51
CHMP2A-207ENST00000600804 IL12RB2Q99665 862 aa11.85□□□□□ -0.51
CHMP2A-207ENST00000600804 FERMT1Q9BQL6 677 aa11.85□□□□□ -0.51
CHMP2A-207ENST00000600804 SPON2Q9BUD6 331 aa11.85□□□□□ -0.51
CHMP2A-207ENST00000600804 L2HGDHQ9H9P8 463 aa11.85□□□□□ -0.51
CHMP2A-207ENST00000600804 SP110Q9HB58 689 aa11.85□□□□□ -0.51
CHMP2A-207ENST00000600804 THAP10Q9P2Z0 257 aaPredicted RBP11.85□□□□□ -0.51
CHMP2A-207ENST00000600804 UBA2Q9UBT2 640 aaPredicted RBP11.85□□□□□ -0.51
CHMP2A-207ENST00000600804 FEZ2Q9UHY8 353 aaPredicted RBP11.85□□□□□ -0.51
CHMP2A-207ENST00000600804 SLC25A13Q9UJS0 675 aa11.85□□□□□ -0.51
CHMP2A-207ENST00000600804 PLA2G4CQ9UP65 541 aa11.85□□□□□ -0.51
CHMP2A-207ENST00000600804 LOC400499M0QZD8 3231 aa11.84□□□□□ -0.51
CHMP2A-207ENST00000600804 J3KR12 359 aa11.84□□□□□ -0.51
CHMP2A-207ENST00000600804 CBX4O00257 560 aa11.84□□□□□ -0.51
CHMP2A-207ENST00000600804 KRIT1O00522 736 aa11.84□□□□□ -0.51
CHMP2A-207ENST00000600804 SNAP91O60641 907 aa11.84□□□□□ -0.51
CHMP2A-207ENST00000600804 RPP40O75818 363 aaKnown RBP11.84□□□□□ -0.51
CHMP2A-207ENST00000600804 KCNK5O95279 499 aa11.84□□□□□ -0.51
CHMP2A-207ENST00000600804 EGFP01133 1207 aa11.84□□□□□ -0.51
CHMP2A-207ENST00000600804 GLDCP23378 1020 aa11.84□□□□□ -0.51
CHMP2A-207ENST00000600804 CHRNA3P32297 505 aa11.84□□□□□ -0.51
CHMP2A-207ENST00000600804 NNMTP40261 264 aa11.84□□□□□ -0.51
CHMP2A-207ENST00000600804 RENBPP51606 427 aa11.84□□□□□ -0.51
CHMP2A-207ENST00000600804 NSUN2Q08J23 767 aaKnown RBP eCLIP11.84□□□□□ -0.51
CHMP2A-207ENST00000600804 RALGPS1Q5JS13 557 aa11.84□□□□□ -0.51
CHMP2A-207ENST00000600804 ALG1LQ6GMV1 187 aa11.84□□□□□ -0.51
CHMP2A-207ENST00000600804 ARHGAP36Q6ZRI8 547 aa11.84□□□□□ -0.51
CHMP2A-207ENST00000600804 TRMT11Q7Z4G4 463 aaKnown RBP11.84□□□□□ -0.51
CHMP2A-207ENST00000600804 SH2D3CQ8N5H7 860 aa11.84□□□□□ -0.51
CHMP2A-207ENST00000600804 NSMCE1Q8WV22 266 aa11.84□□□□□ -0.51
CHMP2A-207ENST00000600804 ZNF592Q92610 1267 aa11.84□□□□□ -0.51
CHMP2A-207ENST00000600804 SLCO2A1Q92959 643 aa11.84□□□□□ -0.51
CHMP2A-207ENST00000600804 CAPZA3Q96KX2 299 aa11.84□□□□□ -0.51
CHMP2A-207ENST00000600804 RUNDC3BQ96NL0 473 aa11.84□□□□□ -0.51
CHMP2A-207ENST00000600804 PSKH2Q96QS6 385 aa11.84□□□□□ -0.51
CHMP2A-207ENST00000600804 USP29Q9HBJ7 922 aa11.84□□□□□ -0.51
CHMP2A-207ENST00000600804 HAUS2Q9NVX0 235 aa11.84□□□□□ -0.51
CHMP2A-207ENST00000600804 HCN2Q9UL51 889 aa11.84□□□□□ -0.51
CHMP2A-207ENST00000600804 DNPEPQ9ULA0 475 aa11.84□□□□□ -0.51
CHMP2A-207ENST00000600804 ERVW-1Q9UQF0 538 aa11.84□□□□□ -0.51
CHMP2A-207ENST00000600804 C5orf60A6NFR6 353 aa11.83□□□□□ -0.52
CHMP2A-207ENST00000600804 GIPC1O14908 333 aa11.83□□□□□ -0.52
CHMP2A-207ENST00000600804 RNF40O75150 1001 aa11.83□□□□□ -0.52
CHMP2A-207ENST00000600804 PHF2O75151 1096 aa11.83□□□□□ -0.52
CHMP2A-207ENST00000600804 MAP3K6O95382 1288 aa11.83□□□□□ -0.52
CHMP2A-207ENST00000600804 SRCP12931 536 aa11.83□□□□□ -0.52
CHMP2A-207ENST00000600804 CCNB1P14635 433 aa11.83□□□□□ -0.52
CHMP2A-207ENST00000600804 HOXB3P14651 431 aaPredicted RBP11.83□□□□□ -0.52
CHMP2A-207ENST00000600804 VAV1P15498 845 aa11.83□□□□□ -0.52
CHMP2A-207ENST00000600804 MPLP40238 635 aa11.83□□□□□ -0.52
CHMP2A-207ENST00000600804 CSNK1DP48730 415 aa11.83□□□□□ -0.52
CHMP2A-207ENST00000600804 AP1B1Q10567 949 aa11.83□□□□□ -0.52
CHMP2A-207ENST00000600804 LBRQ14739 615 aaKnown RBP11.83□□□□□ -0.52
CHMP2A-207ENST00000600804 PLK5Q496M5 336 aa11.83□□□□□ -0.52
CHMP2A-207ENST00000600804 TEX44Q53QW1 395 aa11.83□□□□□ -0.52
CHMP2A-207ENST00000600804 DARS2Q6PI48 645 aaKnown RBP11.83□□□□□ -0.52
CHMP2A-207ENST00000600804 ZC3H18Q86VM9 953 aaKnown RBP11.83□□□□□ -0.52
CHMP2A-207ENST00000600804 ZNF354CQ86Y25 554 aa11.83□□□□□ -0.52
CHMP2A-207ENST00000600804 BBS5Q8N3I7 341 aa11.83□□□□□ -0.52
CHMP2A-207ENST00000600804 PCDH20Q8N6Y1 951 aaKnown RBP11.83□□□□□ -0.52
CHMP2A-207ENST00000600804 CCNYQ8ND76 341 aa11.83□□□□□ -0.52
CHMP2A-207ENST00000600804 MNS1Q8NEH6 495 aa11.83□□□□□ -0.52
CHMP2A-207ENST00000600804 SPATA4Q8NEY3 305 aa11.83□□□□□ -0.52
CHMP2A-207ENST00000600804 ATL2Q8NHH9 583 aa11.83□□□□□ -0.52
CHMP2A-207ENST00000600804 FRS2Q8WU20 508 aa11.83□□□□□ -0.52
CHMP2A-207ENST00000600804 C1orf54Q8WWF1 131 aa11.83□□□□□ -0.52
CHMP2A-207ENST00000600804 HTR3CQ8WXA8 447 aa11.83□□□□□ -0.52
CHMP2A-207ENST00000600804 LOXL4Q96JB6 756 aa11.83□□□□□ -0.52
CHMP2A-207ENST00000600804 ZC3H10Q96K80 434 aaKnown RBP11.83□□□□□ -0.52
CHMP2A-207ENST00000600804 HHIPQ96QV1 700 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms