RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 C1orf216Q8TAB5 229 aa14.38□□□□□ -0.11
LIG1-218ENST00000599322 NSMCE1Q8WV22 266 aa14.38□□□□□ -0.11
LIG1-218ENST00000599322 HSPH1Q92598 858 aa14.38□□□□□ -0.11
LIG1-218ENST00000599322 HMCESQ96FZ2 354 aa14.38□□□□□ -0.11
LIG1-218ENST00000599322 SLC6A18Q96N87 628 aa14.38□□□□□ -0.11
LIG1-218ENST00000599322 SP110Q9HB58 689 aa14.38□□□□□ -0.11
LIG1-218ENST00000599322 ARHGAP20Q9P2F6 1191 aa14.38□□□□□ -0.11
LIG1-218ENST00000599322 UVRAGQ9P2Y5 699 aa14.38□□□□□ -0.11
LIG1-218ENST00000599322 PCDHGB2Q9Y5G2 931 aa14.38□□□□□ -0.11
LIG1-218ENST00000599322 PCDH15Q96QU1 1955 aa14.38□□□□□ -0.11
LIG1-218ENST00000599322 SSU72P8A0A1W2PR75 194 aa14.37□□□□□ -0.11
LIG1-218ENST00000599322 DFFAO00273 331 aa14.37□□□□□ -0.11
LIG1-218ENST00000599322 PLK4O00444 970 aa14.37□□□□□ -0.11
LIG1-218ENST00000599322 YKT6O15498 198 aa14.37□□□□□ -0.11
LIG1-218ENST00000599322 TMCC1O94876 653 aa14.37□□□□□ -0.11
LIG1-218ENST00000599322 CTSLP07711 333 aa14.37□□□□□ -0.11
LIG1-218ENST00000599322 ERCC2P18074 760 aa14.37□□□□□ -0.11
LIG1-218ENST00000599322 SERPINB6P35237 376 aa14.37□□□□□ -0.11
LIG1-218ENST00000599322 ARRB1P49407 418 aaPredicted RBP14.37□□□□□ -0.11
LIG1-218ENST00000599322 SGCGQ13326 291 aa14.37□□□□□ -0.11
LIG1-218ENST00000599322 SLC18A3Q16572 532 aa14.37□□□□□ -0.11
LIG1-218ENST00000599322 ODF2Q5BJF6 829 aa14.37□□□□□ -0.11
LIG1-218ENST00000599322 ZNF805Q5CZA5 627 aa14.37□□□□□ -0.11
LIG1-218ENST00000599322 AGBL4Q5VU57 503 aa14.37□□□□□ -0.11
LIG1-218ENST00000599322 GDPD4Q6W3E5 623 aa14.37□□□□□ -0.11
LIG1-218ENST00000599322 LEKR1Q6ZMV7 388 aa14.37□□□□□ -0.11
LIG1-218ENST00000599322 BBS5Q8N3I7 341 aa14.37□□□□□ -0.11
LIG1-218ENST00000599322 OR2I1PQ8NGU4 316 aa14.37□□□□□ -0.11
LIG1-218ENST00000599322 FAM174AQ8TBP5 190 aa14.37□□□□□ -0.11
LIG1-218ENST00000599322 ZNF564Q8TBZ8 553 aaPredicted RBP14.37□□□□□ -0.11
LIG1-218ENST00000599322 TEKT4Q8WW24 435 aa14.37□□□□□ -0.11
LIG1-218ENST00000599322 ARRDC3Q96B67 414 aa14.37□□□□□ -0.11
LIG1-218ENST00000599322 KCTD15Q96SI1 283 aaPredicted RBP14.37□□□□□ -0.11
LIG1-218ENST00000599322 SNX11Q9Y5W9 270 aa14.37□□□□□ -0.11
LIG1-218ENST00000599322 DOCK4Q8N1I0 1966 aa14.36□□□□□ -0.11
LIG1-218ENST00000599322 A0A1W2PQU0 124 aa14.36□□□□□ -0.11
LIG1-218ENST00000599322 AKR1B15C9JRZ8 316 aaPredicted RBP14.36□□□□□ -0.11
LIG1-218ENST00000599322 FLRT2O43155 660 aa14.36□□□□□ -0.11
LIG1-218ENST00000599322 LATO43561 262 aa14.36□□□□□ -0.11
LIG1-218ENST00000599322 PALMO75781 387 aa14.36□□□□□ -0.11
LIG1-218ENST00000599322 ADRB3P13945 408 aa14.36□□□□□ -0.11
LIG1-218ENST00000599322 RENBPP51606 427 aa14.36□□□□□ -0.11
LIG1-218ENST00000599322 RPS21P63220 83 aaKnown RBP14.36□□□□□ -0.11
LIG1-218ENST00000599322 SIM1P81133 766 aaPredicted RBP14.36□□□□□ -0.11
LIG1-218ENST00000599322 RFTN1Q14699 578 aaPredicted RBP14.36□□□□□ -0.11
LIG1-218ENST00000599322 PIP5KL1Q5T9C9 394 aa14.36□□□□□ -0.11
LIG1-218ENST00000599322 TMCO4Q5TGY1 634 aa14.36□□□□□ -0.11
LIG1-218ENST00000599322 KIAA1161Q6NSJ0 714 aa14.36□□□□□ -0.11
LIG1-218ENST00000599322 TMCO3Q6UWJ1 677 aa14.36□□□□□ -0.11
LIG1-218ENST00000599322 TTC7BQ86TV6 843 aa14.36□□□□□ -0.11
LIG1-218ENST00000599322 IQCHQ86VS3 1027 aa14.36□□□□□ -0.11
LIG1-218ENST00000599322 HORMAD1Q86X24 394 aa14.36□□□□□ -0.11
LIG1-218ENST00000599322 NAXDQ8IW45 347 aa14.36□□□□□ -0.11
LIG1-218ENST00000599322 MAP7D3Q8IWC1 876 aa14.36□□□□□ -0.11
LIG1-218ENST00000599322 NIPA2Q8N8Q9 360 aa14.36□□□□□ -0.11
LIG1-218ENST00000599322 MFSD2AQ8NA29 543 aa14.36□□□□□ -0.11
LIG1-218ENST00000599322 RHBDD1Q8TEB9 315 aa14.36□□□□□ -0.11
LIG1-218ENST00000599322 FAM131CQ96AQ9 280 aa14.36□□□□□ -0.11
LIG1-218ENST00000599322 KLHDC7BQ96G42 594 aa14.36□□□□□ -0.11
LIG1-218ENST00000599322 CELF6Q96J87 481 aaKnown RBP14.36□□□□□ -0.11
LIG1-218ENST00000599322 DNAJC7Q99615 494 aa14.36□□□□□ -0.11
LIG1-218ENST00000599322 CDC6Q99741 560 aa14.36□□□□□ -0.11
LIG1-218ENST00000599322 CINPQ9BW66 212 aaPredicted RBP14.36□□□□□ -0.11
LIG1-218ENST00000599322 TRIM7Q9C029 511 aa14.36□□□□□ -0.11
LIG1-218ENST00000599322 LUC7LQ9NQ29 371 aaKnown RBP14.36□□□□□ -0.11
LIG1-218ENST00000599322 ABHD10Q9NUJ1 306 aa14.36□□□□□ -0.11
LIG1-218ENST00000599322 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.36□□□□□ -0.11
LIG1-218ENST00000599322 HAUS2Q9NVX0 235 aa14.36□□□□□ -0.11
LIG1-218ENST00000599322 NEU3Q9UQ49 428 aa14.36□□□□□ -0.11
LIG1-218ENST00000599322 WASF2Q9Y6W5 498 aa14.36□□□□□ -0.11
LIG1-218ENST00000599322 TLR4O00206 839 aa14.35□□□□□ -0.11
LIG1-218ENST00000599322 SLC31A1O15431 190 aa14.35□□□□□ -0.11
LIG1-218ENST00000599322 TSPAN6O43657 245 aa14.35□□□□□ -0.11
LIG1-218ENST00000599322 SH3BP5O60239 455 aa14.35□□□□□ -0.11
LIG1-218ENST00000599322 TRIM16O95361 564 aa14.35□□□□□ -0.11
LIG1-218ENST00000599322 UGT2B4P06133 528 aa14.35□□□□□ -0.11
LIG1-218ENST00000599322 CD59P13987 128 aa14.35□□□□□ -0.11
LIG1-218ENST00000599322 HNRNPA2B1P22626 353 aaKnown RBP14.35□□□□□ -0.11
LIG1-218ENST00000599322 CTSKP43235 329 aa14.35□□□□□ -0.11
LIG1-218ENST00000599322 PAPOLAP51003 745 aaKnown RBP14.35□□□□□ -0.11
LIG1-218ENST00000599322 SUOXP51687 545 aa14.35□□□□□ -0.11
LIG1-218ENST00000599322 METAP1P53582 386 aa14.35□□□□□ -0.11
LIG1-218ENST00000599322 PPP2CBP62714 309 aa14.35□□□□□ -0.11
LIG1-218ENST00000599322 PPP2CAP67775 309 aa14.35□□□□□ -0.11
LIG1-218ENST00000599322 MAPK8IP2Q13387 824 aaPredicted RBP14.35□□□□□ -0.11
LIG1-218ENST00000599322 TRIP6Q15654 476 aaKnown RBP14.35□□□□□ -0.11
LIG1-218ENST00000599322 DPYSL2Q16555 572 aa14.35□□□□□ -0.11
LIG1-218ENST00000599322 CA9Q16790 459 aa14.35□□□□□ -0.11
LIG1-218ENST00000599322 SMTNL2Q2TAL5 461 aa14.35□□□□□ -0.11
LIG1-218ENST00000599322 KCNT1Q5JUK3 1230 aa14.35□□□□□ -0.11
LIG1-218ENST00000599322 ARTNQ5T4W7 220 aa14.35□□□□□ -0.11
LIG1-218ENST00000599322 PIP4P1Q86T03 277 aa14.35□□□□□ -0.11
LIG1-218ENST00000599322 ARFGAP1Q8N6T3 406 aa14.35□□□□□ -0.11
LIG1-218ENST00000599322 OR6K2Q8NGY2 324 aa14.35□□□□□ -0.11
LIG1-218ENST00000599322 KLHL32Q96NJ5 620 aa14.35□□□□□ -0.11
LIG1-218ENST00000599322 PEBP4Q96S96 227 aa14.35□□□□□ -0.11
LIG1-218ENST00000599322 C1QTNF7Q9BXJ2 289 aa14.35□□□□□ -0.11
LIG1-218ENST00000599322 SLC39A8Q9C0K1 460 aa14.35□□□□□ -0.11
LIG1-218ENST00000599322 LRRC19Q9H756 370 aa14.35□□□□□ -0.11
LIG1-218ENST00000599322 CWC15Q9P013 229 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms