RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 ACADMP11310 421 aa22.43■■□□□ 1.18
CHMP2A-204ENST00000597848 RBL1P28749 1068 aa22.43■■□□□ 1.18
CHMP2A-204ENST00000597848 GKP32189 559 aa22.43■■□□□ 1.18
CHMP2A-204ENST00000597848 RGRP47804 291 aa22.43■■□□□ 1.18
CHMP2A-204ENST00000597848 MAXP61244 160 aa22.43■■□□□ 1.18
CHMP2A-204ENST00000597848 NSUN2Q08J23 767 aaKnown RBP eCLIP22.43■■□□□ 1.18
CHMP2A-204ENST00000597848 ZBTB17Q13105 803 aa22.43■■□□□ 1.18
CHMP2A-204ENST00000597848 SNX1Q13596 522 aa22.43■■□□□ 1.18
CHMP2A-204ENST00000597848 ARSIQ5FYB1 569 aa22.43■■□□□ 1.18
CHMP2A-204ENST00000597848 PGBD5Q8N414 524 aa22.43■■□□□ 1.18
CHMP2A-204ENST00000597848 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.43■■□□□ 1.18
CHMP2A-204ENST00000597848 CAPZA3Q96KX2 299 aa22.43■■□□□ 1.18
CHMP2A-204ENST00000597848 IL12RB2Q99665 862 aa22.43■■□□□ 1.18
CHMP2A-204ENST00000597848 TPSD1Q9BZJ3 242 aa22.43■■□□□ 1.18
CHMP2A-204ENST00000597848 EBF1Q9UH73 591 aa22.43■■□□□ 1.18
CHMP2A-204ENST00000597848 DNPEPQ9ULA0 475 aa22.43■■□□□ 1.18
CHMP2A-204ENST00000597848 TTC7AQ9ULT0 858 aaPredicted RBP22.43■■□□□ 1.18
CHMP2A-204ENST00000597848 TTC24A2A3L6 582 aaPredicted RBP22.42■■□□□ 1.18
CHMP2A-204ENST00000597848 C1QTNF3-AMACRE9PGA6 284 aa22.42■■□□□ 1.18
CHMP2A-204ENST00000597848 AXIN1O15169 862 aa22.42■■□□□ 1.18
CHMP2A-204ENST00000597848 FANCGO15287 622 aa22.42■■□□□ 1.18
CHMP2A-204ENST00000597848 INSIG1O15503 277 aa22.42■■□□□ 1.18
CHMP2A-204ENST00000597848 DNTTP04053 509 aa22.42■■□□□ 1.18
CHMP2A-204ENST00000597848 HLA-DQB2P05538 268 aa22.42■■□□□ 1.18
CHMP2A-204ENST00000597848 HOXA6P31267 233 aa22.42■■□□□ 1.18
CHMP2A-204ENST00000597848 SLC8A1P32418 973 aa22.42■■□□□ 1.18
CHMP2A-204ENST00000597848 CSNK1DP48730 415 aa22.42■■□□□ 1.18
CHMP2A-204ENST00000597848 FNTBP49356 437 aa22.42■■□□□ 1.18
CHMP2A-204ENST00000597848 DMWDQ09019 674 aa22.42■■□□□ 1.18
CHMP2A-204ENST00000597848 CST6Q15828 149 aa22.42■■□□□ 1.18
CHMP2A-204ENST00000597848 POM121L1PQ3SYA9 428 aa22.42■■□□□ 1.18
CHMP2A-204ENST00000597848 FAM182AQ5T1J6 154 aa22.42■■□□□ 1.18
CHMP2A-204ENST00000597848 FAM46CQ5VWP2 391 aa22.42■■□□□ 1.18
CHMP2A-204ENST00000597848 RASSF3Q86WH2 238 aa22.42■■□□□ 1.18
CHMP2A-204ENST00000597848 TMIEQ8NEW7 156 aa22.42■■□□□ 1.18
CHMP2A-204ENST00000597848 SLC35B2Q8TB61 432 aa22.42■■□□□ 1.18
CHMP2A-204ENST00000597848 PIP4K2CQ8TBX8 421 aa22.42■■□□□ 1.18
CHMP2A-204ENST00000597848 ACTRT1Q8TDG2 376 aa22.42■■□□□ 1.18
CHMP2A-204ENST00000597848 GANCQ8TET4 914 aa22.42■■□□□ 1.18
CHMP2A-204ENST00000597848 AGAP3Q96P47 875 aa22.42■■□□□ 1.18
CHMP2A-204ENST00000597848 POLR1EQ9GZS1 481 aaKnown RBP22.42■■□□□ 1.18
CHMP2A-204ENST00000597848 SCUBE2Q9NQ36 999 aa22.42■■□□□ 1.18
CHMP2A-204ENST00000597848 SMARCAL1Q9NZC9 954 aa22.42■■□□□ 1.18
CHMP2A-204ENST00000597848 AMACRQ9UHK6 382 aa22.42■■□□□ 1.18
CHMP2A-204ENST00000597848 PPM1HQ9ULR3 514 aa22.42■■□□□ 1.18
CHMP2A-204ENST00000597848 MUC3AQ02505 3323 aa22.41■■□□□ 1.18
CHMP2A-204ENST00000597848 BCLAF3A2AJT9 711 aaKnown RBP22.41■■□□□ 1.18
CHMP2A-204ENST00000597848 RNF103O00237 685 aa22.41■■□□□ 1.18
CHMP2A-204ENST00000597848 KPNA3O00505 521 aaPredicted RBP22.41■■□□□ 1.18
CHMP2A-204ENST00000597848 KCNN4O15554 427 aa22.41■■□□□ 1.18
CHMP2A-204ENST00000597848 LIASO43766 372 aa22.41■■□□□ 1.18
CHMP2A-204ENST00000597848 LEFTY1O75610 366 aa22.41■■□□□ 1.18
CHMP2A-204ENST00000597848 STK10O94804 968 aaKnown RBP22.41■■□□□ 1.18
CHMP2A-204ENST00000597848 CTSLP07711 333 aa22.41■■□□□ 1.18
CHMP2A-204ENST00000597848 PTPN3P26045 913 aa22.41■■□□□ 1.18
CHMP2A-204ENST00000597848 DEKP35659 375 aaKnown RBP22.41■■□□□ 1.18
CHMP2A-204ENST00000597848 NRLP54845 237 aa22.41■■□□□ 1.18
CHMP2A-204ENST00000597848 BYSLQ13895 437 aaKnown RBP22.41■■□□□ 1.18
CHMP2A-204ENST00000597848 SIX1Q15475 284 aaPredicted RBP22.41■■□□□ 1.18
CHMP2A-204ENST00000597848 CCNG2Q16589 344 aa22.41■■□□□ 1.18
CHMP2A-204ENST00000597848 TEX44Q53QW1 395 aa22.41■■□□□ 1.18
CHMP2A-204ENST00000597848 ZNF592Q92610 1267 aa22.41■■□□□ 1.18
CHMP2A-204ENST00000597848 ZNF419Q96HQ0 510 aaPredicted RBP22.41■■□□□ 1.18
CHMP2A-204ENST00000597848 SEMA3CQ99985 751 aa22.41■■□□□ 1.18
CHMP2A-204ENST00000597848 MGME1Q9BQP7 344 aa22.41■■□□□ 1.18
CHMP2A-204ENST00000597848 AP1M1Q9BXS5 423 aa22.41■■□□□ 1.18
CHMP2A-204ENST00000597848 KLHL8Q9P2G9 620 aaPredicted RBP22.41■■□□□ 1.18
CHMP2A-204ENST00000597848 SARDHQ9UL12 918 aa22.41■■□□□ 1.18
CHMP2A-204ENST00000597848 ZNF148Q9UQR1 794 aa22.41■■□□□ 1.18
CHMP2A-204ENST00000597848 WASF2Q9Y6W5 498 aa22.41■■□□□ 1.18
CHMP2A-204ENST00000597848 SHROOM3Q8TF72 1996 aa22.41■■□□□ 1.18
CHMP2A-204ENST00000597848 CACNA1IQ9P0X4 2223 aa22.41■■□□□ 1.18
CHMP2A-204ENST00000597848 MID1O15344 667 aa22.4■■□□□ 1.18
CHMP2A-204ENST00000597848 GJB3O75712 270 aa22.4■■□□□ 1.18
CHMP2A-204ENST00000597848 ZNF189O75820 626 aaPredicted RBP22.4■■□□□ 1.18
CHMP2A-204ENST00000597848 ADH1BP00325 375 aa22.4■■□□□ 1.18
CHMP2A-204ENST00000597848 TUBB4AP04350 444 aa22.4■■□□□ 1.18
CHMP2A-204ENST00000597848 SP9P0CG40 484 aa22.4■■□□□ 1.18
CHMP2A-204ENST00000597848 TDGF1P13385 188 aa22.4■■□□□ 1.18
CHMP2A-204ENST00000597848 ZBTB16Q05516 673 aa22.4■■□□□ 1.18
CHMP2A-204ENST00000597848 WASHC5Q12768 1159 aa22.4■■□□□ 1.18
CHMP2A-204ENST00000597848 TTC31Q49AM3 519 aaPredicted RBP22.4■■□□□ 1.18
CHMP2A-204ENST00000597848 PID1Q7Z2X4 250 aa22.4■■□□□ 1.18
CHMP2A-204ENST00000597848 CNTD1Q8N815 330 aa22.4■■□□□ 1.18
CHMP2A-204ENST00000597848 LRIG1Q96JA1 1093 aa22.4■■□□□ 1.18
CHMP2A-204ENST00000597848 NUDCD1Q96RS6 583 aa22.4■■□□□ 1.18
CHMP2A-204ENST00000597848 VAT1Q99536 393 aa22.4■■□□□ 1.18
CHMP2A-204ENST00000597848 PABPC3Q9H361 631 aaKnown RBP22.4■■□□□ 1.18
CHMP2A-204ENST00000597848 DYRK4Q9NR20 520 aa22.4■■□□□ 1.18
CHMP2A-204ENST00000597848 HOMER3Q9NSC5 361 aa22.4■■□□□ 1.18
CHMP2A-204ENST00000597848 ATP8A1Q9Y2Q0 1164 aa22.4■■□□□ 1.18
CHMP2A-204ENST00000597848 CKAP5Q14008 2032 aa22.4■■□□□ 1.18
CHMP2A-204ENST00000597848 KIF2AO00139 706 aaPredicted RBP22.39■■□□□ 1.17
CHMP2A-204ENST00000597848 UGT2B4P06133 528 aa22.39■■□□□ 1.17
CHMP2A-204ENST00000597848 C5AR1P21730 350 aa22.39■■□□□ 1.17
CHMP2A-204ENST00000597848 CES1P23141 567 aa22.39■■□□□ 1.17
CHMP2A-204ENST00000597848 MAPK8P45983 427 aa22.39■■□□□ 1.17
CHMP2A-204ENST00000597848 AP1S1P61966 158 aa22.39■■□□□ 1.17
CHMP2A-204ENST00000597848 DSC2Q02487 901 aa22.39■■□□□ 1.17
CHMP2A-204ENST00000597848 SFSWAPQ12872 951 aaKnown RBP22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms