RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 CACUL1Q86Y37 369 aa19.96■□□□□ 0.79
LSM4-203ENST00000593829 ARHGAP12Q8IWW6 846 aa19.96■□□□□ 0.79
LSM4-203ENST00000593829 CCDC114Q96M63 670 aa19.96■□□□□ 0.79
LSM4-203ENST00000593829 FAM129BQ96TA1 746 aa19.96■□□□□ 0.79
LSM4-203ENST00000593829 ITM2CQ9NQX7 267 aa19.96■□□□□ 0.79
LSM4-203ENST00000593829 ACTL7AQ9Y615 435 aa19.96■□□□□ 0.79
LSM4-203ENST00000593829 DFFAO00273 331 aa19.95■□□□□ 0.78
LSM4-203ENST00000593829 VSIG1Q86XK7 387 aa19.95■□□□□ 0.78
LSM4-203ENST00000593829 PCDH19Q8TAB3 1148 aa19.95■□□□□ 0.78
LSM4-203ENST00000593829 OR8D1Q8WZ84 308 aa19.95■□□□□ 0.78
LSM4-203ENST00000593829 FAF2Q96CS3 445 aa19.95■□□□□ 0.78
LSM4-203ENST00000593829 RAB23Q9ULC3 237 aa19.95■□□□□ 0.78
LSM4-203ENST00000593829 CYP8B1Q9UNU6 501 aa19.95■□□□□ 0.78
LSM4-203ENST00000593829 MFHAS1Q9Y4C4 1052 aa19.95■□□□□ 0.78
LSM4-203ENST00000593829 FARP1Q9Y4F1 1045 aaPredicted RBP19.95■□□□□ 0.78
LSM4-203ENST00000593829 ANKRD65E5RJM6 399 aa19.94■□□□□ 0.78
LSM4-203ENST00000593829 BNIP3LO60238 219 aa19.94■□□□□ 0.78
LSM4-203ENST00000593829 DNTTP04053 509 aa19.94■□□□□ 0.78
LSM4-203ENST00000593829 KRT1P04264 644 aa19.94■□□□□ 0.78
LSM4-203ENST00000593829 YTHDF3Q7Z739 585 aaKnown RBP19.94■□□□□ 0.78
LSM4-203ENST00000593829 DSG4Q86SJ6 1040 aa19.94■□□□□ 0.78
LSM4-203ENST00000593829 MMAAQ8IVH4 418 aaKnown RBP19.94■□□□□ 0.78
LSM4-203ENST00000593829 PCDH20Q8N6Y1 951 aaKnown RBP19.94■□□□□ 0.78
LSM4-203ENST00000593829 CASKIN2Q8WXE0 1202 aa19.94■□□□□ 0.78
LSM4-203ENST00000593829 ISG20Q96AZ6 181 aaKnown RBP19.94■□□□□ 0.78
LSM4-203ENST00000593829 ARL8AQ96BM9 186 aa19.94■□□□□ 0.78
LSM4-203ENST00000593829 ZIM3Q96PE6 472 aa19.94■□□□□ 0.78
LSM4-203ENST00000593829 USP36Q9P275 1121 aaKnown RBP19.94■□□□□ 0.78
LSM4-203ENST00000593829 FCF1Q9Y324 198 aaKnown RBP19.94■□□□□ 0.78
LSM4-203ENST00000593829 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.94■□□□□ 0.78
LSM4-203ENST00000593829 VPS13AQ96RL7 3174 aa19.94■□□□□ 0.78
LSM4-203ENST00000593829 EML5Q05BV3 1969 aa19.94■□□□□ 0.78
LSM4-203ENST00000593829 ZNF487B1APH4 448 aa19.94■□□□□ 0.78
LSM4-203ENST00000593829 CES2O00748 559 aa19.94■□□□□ 0.78
LSM4-203ENST00000593829 MCF2LO15068 1137 aa19.94■□□□□ 0.78
LSM4-203ENST00000593829 ALOX15BO15296 676 aa19.94■□□□□ 0.78
LSM4-203ENST00000593829 ZNF821O75541 412 aaPredicted RBP19.94■□□□□ 0.78
LSM4-203ENST00000593829 LMNAP02545 664 aaKnown RBP19.94■□□□□ 0.78
LSM4-203ENST00000593829 RECQLP46063 649 aaPredicted RBP19.94■□□□□ 0.78
LSM4-203ENST00000593829 TPMTP51580 245 aa19.94■□□□□ 0.78
LSM4-203ENST00000593829 INO80DQ53TQ3 878 aaPredicted RBP19.94■□□□□ 0.78
LSM4-203ENST00000593829 FAM160A2Q8N612 972 aaPredicted RBP19.94■□□□□ 0.78
LSM4-203ENST00000593829 NETO2Q8NC67 525 aa19.94■□□□□ 0.78
LSM4-203ENST00000593829 OR2A12Q8NGT7 310 aa19.94■□□□□ 0.78
LSM4-203ENST00000593829 FAM122AQ96E09 287 aa19.94■□□□□ 0.78
LSM4-203ENST00000593829 TNKS2Q9H2K2 1166 aa19.94■□□□□ 0.78
LSM4-203ENST00000593829 SCML1Q9UN30 329 aa19.94■□□□□ 0.78
LSM4-203ENST00000593829 SMG5Q9UPR3 1016 aaKnown RBP19.94■□□□□ 0.78
LSM4-203ENST00000593829 C3orf70A6NLC5 250 aaPredicted RBP19.93■□□□□ 0.78
LSM4-203ENST00000593829 J3KR12 359 aa19.93■□□□□ 0.78
LSM4-203ENST00000593829 MAP3K13O43283 966 aa19.93■□□□□ 0.78
LSM4-203ENST00000593829 PRAMEF11O60813 436 aa19.93■□□□□ 0.78
LSM4-203ENST00000593829 SLC7A5Q01650 507 aa19.93■□□□□ 0.78
LSM4-203ENST00000593829 CST6Q15828 149 aa19.93■□□□□ 0.78
LSM4-203ENST00000593829 KBTBD6Q86V97 674 aa19.93■□□□□ 0.78
LSM4-203ENST00000593829 TP53INP2Q8IXH6 220 aa19.93■□□□□ 0.78
LSM4-203ENST00000593829 FRMD1Q8N878 549 aa19.93■□□□□ 0.78
LSM4-203ENST00000593829 SUMF1Q8NBK3 374 aa19.93■□□□□ 0.78
LSM4-203ENST00000593829 ZC3H10Q96K80 434 aaKnown RBP19.93■□□□□ 0.78
LSM4-203ENST00000593829 RNF157Q96PX1 679 aa19.93■□□□□ 0.78
LSM4-203ENST00000593829 UBA2Q9UBT2 640 aaPredicted RBP19.93■□□□□ 0.78
LSM4-203ENST00000593829 IGHV1OR15-9A0A0B4J2B8 117 aa19.92■□□□□ 0.78
LSM4-203ENST00000593829 IL1BP01584 269 aa19.92■□□□□ 0.78
LSM4-203ENST00000593829 BCKDHBP21953 392 aa19.92■□□□□ 0.78
LSM4-203ENST00000593829 OXTRP30559 389 aa19.92■□□□□ 0.78
LSM4-203ENST00000593829 DNA2P51530 1060 aa19.92■□□□□ 0.78
LSM4-203ENST00000593829 SFSWAPQ12872 951 aaKnown RBP19.92■□□□□ 0.78
LSM4-203ENST00000593829 CFAP58Q5T655 872 aa19.92■□□□□ 0.78
LSM4-203ENST00000593829 CNPY4Q8N129 248 aa19.92■□□□□ 0.78
LSM4-203ENST00000593829 PQLC3Q8N755 202 aa19.92■□□□□ 0.78
LSM4-203ENST00000593829 LRRC57Q8N9N7 239 aa19.92■□□□□ 0.78
LSM4-203ENST00000593829 RNF25Q96BH1 459 aaPredicted RBP19.92■□□□□ 0.78
LSM4-203ENST00000593829 MAK16Q9BXY0 300 aaKnown RBP19.92■□□□□ 0.78
LSM4-203ENST00000593829 SP110Q9HB58 689 aa19.92■□□□□ 0.78
LSM4-203ENST00000593829 PDFQ9HBH1 243 aa19.92■□□□□ 0.78
LSM4-203ENST00000593829 CD93Q9NPY3 652 aa19.92■□□□□ 0.78
LSM4-203ENST00000593829 IPO11Q9UI26 975 aaKnown RBP19.92■□□□□ 0.78
LSM4-203ENST00000593829 MBD1Q9UIS9 605 aaPredicted RBP19.92■□□□□ 0.78
LSM4-203ENST00000593829 TMCC1O94876 653 aa19.92■□□□□ 0.78
LSM4-203ENST00000593829 ADH1BP00325 375 aa19.92■□□□□ 0.78
LSM4-203ENST00000593829 IGLV3-19P01714 112 aa19.92■□□□□ 0.78
LSM4-203ENST00000593829 SLC8A1P32418 973 aa19.92■□□□□ 0.78
LSM4-203ENST00000593829 PSMD8P48556 350 aa19.92■□□□□ 0.78
LSM4-203ENST00000593829 IL10RBQ08334 325 aa19.92■□□□□ 0.78
LSM4-203ENST00000593829 PAFAH1B3Q15102 231 aaKnown RBP19.92■□□□□ 0.78
LSM4-203ENST00000593829 LPAL2Q16609 132 aa19.92■□□□□ 0.78
LSM4-203ENST00000593829 PLK5Q496M5 336 aa19.92■□□□□ 0.78
LSM4-203ENST00000593829 CARD16Q5EG05 197 aa19.92■□□□□ 0.78
LSM4-203ENST00000593829 NCBP2-AS2Q69YL0 99 aa19.92■□□□□ 0.78
LSM4-203ENST00000593829 SLC36A4Q6YBV0 504 aa19.92■□□□□ 0.78
LSM4-203ENST00000593829 MICALCLQ6ZW33 695 aa19.92■□□□□ 0.78
LSM4-203ENST00000593829 PLPP6Q8IY26 295 aa19.92■□□□□ 0.78
LSM4-203ENST00000593829 KATNAL2Q8IYT4 538 aa19.92■□□□□ 0.78
LSM4-203ENST00000593829 SYCE1Q8N0S2 351 aa19.92■□□□□ 0.78
LSM4-203ENST00000593829 DUSP15Q9H1R2 295 aaPredicted RBP19.92■□□□□ 0.78
LSM4-203ENST00000593829 PABPC3Q9H361 631 aaKnown RBP19.92■□□□□ 0.78
LSM4-203ENST00000593829 GEMIN8Q9NWZ8 242 aaKnown RBP19.92■□□□□ 0.78
LSM4-203ENST00000593829 PPM1HQ9ULR3 514 aa19.92■□□□□ 0.78
LSM4-203ENST00000593829 MYO15AQ9UKN7 3530 aa19.92■□□□□ 0.78
LSM4-203ENST00000593829 MID1O15344 667 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms