RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 GET4Q7L5D6 327 aaPredicted RBP13.68□□□□□ -0.22
VMP1-217ENST00000593168 MTERF4Q7Z6M4 381 aaKnown RBP13.68□□□□□ -0.22
VMP1-217ENST00000593168 CAND1Q86VP6 1230 aaKnown RBP13.68□□□□□ -0.22
VMP1-217ENST00000593168 TMEM25Q86YD3 366 aa13.68□□□□□ -0.22
VMP1-217ENST00000593168 C1orf210Q8IVY1 113 aa13.68□□□□□ -0.22
VMP1-217ENST00000593168 MAML2Q8IZL2 1156 aaPredicted RBP13.68□□□□□ -0.22
VMP1-217ENST00000593168 BBS5Q8N3I7 341 aa13.68□□□□□ -0.22
VMP1-217ENST00000593168 BPIFB1Q8TDL5 484 aa13.68□□□□□ -0.22
VMP1-217ENST00000593168 OSCP1Q8WVF1 389 aa13.68□□□□□ -0.22
VMP1-217ENST00000593168 UBLCP1Q8WVY7 318 aaPredicted RBP13.68□□□□□ -0.22
VMP1-217ENST00000593168 E2F7Q96AV8 911 aa13.68□□□□□ -0.22
VMP1-217ENST00000593168 RSPRY1Q96DX4 576 aa13.68□□□□□ -0.22
VMP1-217ENST00000593168 ZNF419Q96HQ0 510 aaPredicted RBP13.68□□□□□ -0.22
VMP1-217ENST00000593168 SERPINB12Q96P63 405 aa13.68□□□□□ -0.22
VMP1-217ENST00000593168 LRRC3BQ96PB8 259 aa13.68□□□□□ -0.22
VMP1-217ENST00000593168 GORASP1Q9BQQ3 440 aa13.68□□□□□ -0.22
VMP1-217ENST00000593168 FEM1AQ9BSK4 669 aa13.68□□□□□ -0.22
VMP1-217ENST00000593168 FOXQ1Q9C009 403 aa13.68□□□□□ -0.22
VMP1-217ENST00000593168 SLC25A51Q9H1U9 297 aa13.68□□□□□ -0.22
VMP1-217ENST00000593168 CDC42EP4Q9H3Q1 356 aaKnown RBP13.68□□□□□ -0.22
VMP1-217ENST00000593168 SAYSD1Q9NPB0 183 aa13.68□□□□□ -0.22
VMP1-217ENST00000593168 HAUS2Q9NVX0 235 aa13.68□□□□□ -0.22
VMP1-217ENST00000593168 DLL3Q9NYJ7 618 aa13.68□□□□□ -0.22
VMP1-217ENST00000593168 UBA2Q9UBT2 640 aaPredicted RBP13.68□□□□□ -0.22
VMP1-217ENST00000593168 RIPK2O43353 540 aa13.67□□□□□ -0.22
VMP1-217ENST00000593168 ZMPSTE24O75844 475 aa13.67□□□□□ -0.22
VMP1-217ENST00000593168 TTC4O95801 387 aa13.67□□□□□ -0.22
VMP1-217ENST00000593168 MZF1P28698 734 aaPredicted RBP13.67□□□□□ -0.22
VMP1-217ENST00000593168 CSKP41240 450 aa13.67□□□□□ -0.22
VMP1-217ENST00000593168 VIPR2P41587 438 aa13.67□□□□□ -0.22
VMP1-217ENST00000593168 MAGEA3P43357 314 aa13.67□□□□□ -0.22
VMP1-217ENST00000593168 GEMP55040 296 aa13.67□□□□□ -0.22
VMP1-217ENST00000593168 PDIA2Q13087 525 aaKnown RBP13.67□□□□□ -0.22
VMP1-217ENST00000593168 INO80DQ53TQ3 878 aaPredicted RBP13.67□□□□□ -0.22
VMP1-217ENST00000593168 FNBP1LQ5T0N5 605 aa13.67□□□□□ -0.22
VMP1-217ENST00000593168 ZC3H14Q6PJT7 736 aaKnown RBP13.67□□□□□ -0.22
VMP1-217ENST00000593168 ZNF534Q76KX8 674 aa13.67□□□□□ -0.22
VMP1-217ENST00000593168 DCAF4L2Q8NA75 395 aa13.67□□□□□ -0.22
VMP1-217ENST00000593168 SUMF1Q8NBK3 374 aa13.67□□□□□ -0.22
VMP1-217ENST00000593168 PJA1Q8NG27 643 aa13.67□□□□□ -0.22
VMP1-217ENST00000593168 WFDC5Q8TCV5 224 aa13.67□□□□□ -0.22
VMP1-217ENST00000593168 ACDQ96AP0 544 aa13.67□□□□□ -0.22
VMP1-217ENST00000593168 LRRC39Q96DD0 335 aa13.67□□□□□ -0.22
VMP1-217ENST00000593168 LMLNQ96KR4 655 aa13.67□□□□□ -0.22
VMP1-217ENST00000593168 TTC25Q96NG3 672 aa13.67□□□□□ -0.22
VMP1-217ENST00000593168 PSKH2Q96QS6 385 aa13.67□□□□□ -0.22
VMP1-217ENST00000593168 RPP25Q9BUL9 199 aaKnown RBP13.67□□□□□ -0.22
VMP1-217ENST00000593168 MLPHQ9BV36 600 aaPredicted RBP13.67□□□□□ -0.22
VMP1-217ENST00000593168 BBS2Q9BXC9 721 aa13.67□□□□□ -0.22
VMP1-217ENST00000593168 SLC2A11Q9BYW1 496 aa13.67□□□□□ -0.22
VMP1-217ENST00000593168 EPB41L4BQ9H329 900 aa13.67□□□□□ -0.22
VMP1-217ENST00000593168 SLC2A4RGQ9NR83 387 aa13.67□□□□□ -0.22
VMP1-217ENST00000593168 DNAJC17Q9NVM6 304 aaKnown RBP13.67□□□□□ -0.22
VMP1-217ENST00000593168 PLK2Q9NYY3 685 aa13.67□□□□□ -0.22
VMP1-217ENST00000593168 NINJ2Q9NZG7 142 aa13.67□□□□□ -0.22
VMP1-217ENST00000593168 SEPT3Q9UH03 358 aa13.67□□□□□ -0.22
VMP1-217ENST00000593168 VPS28Q9UK41 221 aa13.67□□□□□ -0.22
VMP1-217ENST00000593168 WNT6Q9Y6F9 365 aa13.67□□□□□ -0.22
VMP1-217ENST00000593168 NUMBLQ9Y6R0 609 aa13.67□□□□□ -0.22
VMP1-217ENST00000593168 HEPACAM2A8MVW5 462 aa13.66□□□□□ -0.22
VMP1-217ENST00000593168 AP3B1O00203 1094 aa13.66□□□□□ -0.22
VMP1-217ENST00000593168 CBX4O00257 560 aa13.66□□□□□ -0.22
VMP1-217ENST00000593168 NUDT17P0C025 328 aa13.66□□□□□ -0.22
VMP1-217ENST00000593168 TSHRP16473 764 aa13.66□□□□□ -0.22
VMP1-217ENST00000593168 CES1P23141 567 aa13.66□□□□□ -0.22
VMP1-217ENST00000593168 GEMIN4P57678 1058 aaKnown RBP13.66□□□□□ -0.22
VMP1-217ENST00000593168 ARF5P84085 180 aa13.66□□□□□ -0.22
VMP1-217ENST00000593168 LMAN2Q12907 356 aa13.66□□□□□ -0.22
VMP1-217ENST00000593168 MPP3Q13368 585 aa13.66□□□□□ -0.22
VMP1-217ENST00000593168 ZNF235Q14590 738 aa13.66□□□□□ -0.22
VMP1-217ENST00000593168 KYNUQ16719 465 aa13.66□□□□□ -0.22
VMP1-217ENST00000593168 EML3Q32P44 896 aa13.66□□□□□ -0.22
VMP1-217ENST00000593168 BBS9Q3SYG4 887 aa13.66□□□□□ -0.22
VMP1-217ENST00000593168 MSS51Q4VC12 460 aa13.66□□□□□ -0.22
VMP1-217ENST00000593168 DNAJC21Q5F1R6 531 aaKnown RBP13.66□□□□□ -0.22
VMP1-217ENST00000593168 LY6G5CQ5SRR4 150 aa13.66□□□□□ -0.22
VMP1-217ENST00000593168 SYCP2LQ5T4T6 812 aa13.66□□□□□ -0.22
VMP1-217ENST00000593168 DENND2CQ68D51 928 aa13.66□□□□□ -0.22
VMP1-217ENST00000593168 RETSATQ6NUM9 610 aa13.66□□□□□ -0.22
VMP1-217ENST00000593168 LRIG3Q6UXM1 1119 aa13.66□□□□□ -0.22
VMP1-217ENST00000593168 LINC00523Q86TU6 105 aa13.66□□□□□ -0.22
VMP1-217ENST00000593168 ZBED8Q8IZ13 594 aa13.66□□□□□ -0.22
VMP1-217ENST00000593168 BHMTQ93088 406 aa13.66□□□□□ -0.22
VMP1-217ENST00000593168 IMP4Q96G21 291 aaKnown RBP13.66□□□□□ -0.22
VMP1-217ENST00000593168 OXNAD1Q96HP4 312 aaPredicted RBP13.66□□□□□ -0.22
VMP1-217ENST00000593168 ZIM3Q96PE6 472 aa13.66□□□□□ -0.22
VMP1-217ENST00000593168 C2orf49Q9BVC5 232 aaPredicted RBP13.66□□□□□ -0.22
VMP1-217ENST00000593168 POLR1EQ9GZS1 481 aaKnown RBP13.66□□□□□ -0.22
VMP1-217ENST00000593168 LRRC40Q9H9A6 602 aa13.66□□□□□ -0.22
VMP1-217ENST00000593168 ZFP14Q9HCL3 533 aa13.66□□□□□ -0.22
VMP1-217ENST00000593168 NT5MQ9NPB1 228 aa13.66□□□□□ -0.22
VMP1-217ENST00000593168 VPS45Q9NRW7 570 aa13.66□□□□□ -0.22
VMP1-217ENST00000593168 DUS2Q9NX74 493 aaKnown RBP13.66□□□□□ -0.22
VMP1-217ENST00000593168 CLEC4EQ9ULY5 219 aa13.66□□□□□ -0.22
VMP1-217ENST00000593168 CEP250Q9BV73 2442 aa13.66□□□□□ -0.22
VMP1-217ENST00000593168 F5H423 210 aaPredicted RBP13.65□□□□□ -0.22
VMP1-217ENST00000593168 CD160O95971 181 aa13.65□□□□□ -0.22
VMP1-217ENST00000593168 ABHD2P08910 425 aa13.65□□□□□ -0.22
VMP1-217ENST00000593168 TYRP14679 529 aa13.65□□□□□ -0.22
VMP1-217ENST00000593168 GLDCP23378 1020 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms