RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 TNS4Q8IZW8 715 aa19.95■□□□□ 0.78
CLIP3-206ENST00000593074 TEX26Q8N6G2 289 aa19.95■□□□□ 0.78
CLIP3-206ENST00000593074 PPP4R1Q8TF05 950 aa19.95■□□□□ 0.78
CLIP3-206ENST00000593074 PRKD2Q9BZL6 878 aa19.95■□□□□ 0.78
CLIP3-206ENST00000593074 SLC39A10Q9ULF5 831 aa19.95■□□□□ 0.78
CLIP3-206ENST00000593074 ALOX15P16050 662 aaPredicted RBP19.94■□□□□ 0.78
CLIP3-206ENST00000593074 CHRNA4P43681 627 aa19.94■□□□□ 0.78
CLIP3-206ENST00000593074 POLD2P49005 469 aa19.94■□□□□ 0.78
CLIP3-206ENST00000593074 USP41Q3LFD5 358 aa19.94■□□□□ 0.78
CLIP3-206ENST00000593074 GIPC2Q8TF65 315 aa19.94■□□□□ 0.78
CLIP3-206ENST00000593074 EBF4Q9BQW3 602 aa19.94■□□□□ 0.78
CLIP3-206ENST00000593074 C1QTNF1Q9BXJ1 281 aa19.94■□□□□ 0.78
CLIP3-206ENST00000593074 NMRAL1Q9HBL8 299 aa19.94■□□□□ 0.78
CLIP3-206ENST00000593074 VPS45Q9NRW7 570 aa19.94■□□□□ 0.78
CLIP3-206ENST00000593074 SLC2A6Q9UGQ3 507 aa19.94■□□□□ 0.78
CLIP3-206ENST00000593074 SLC12A8A0AV02 714 aa19.93■□□□□ 0.78
CLIP3-206ENST00000593074 SLC38A8A6NNN8 435 aa19.93■□□□□ 0.78
CLIP3-206ENST00000593074 APOA4P06727 396 aa19.93■□□□□ 0.78
CLIP3-206ENST00000593074 SERPINA6P08185 405 aa19.93■□□□□ 0.78
CLIP3-206ENST00000593074 PAMP19021 973 aa19.93■□□□□ 0.78
CLIP3-206ENST00000593074 SLC10A7Q0GE19 358 aa19.93■□□□□ 0.78
CLIP3-206ENST00000593074 ITGA9Q13797 1035 aa19.93■□□□□ 0.78
CLIP3-206ENST00000593074 TBCCQ15814 346 aa19.93■□□□□ 0.78
CLIP3-206ENST00000593074 WLSQ5T9L3 541 aa19.93■□□□□ 0.78
CLIP3-206ENST00000593074 MARC1Q5VT66 337 aa19.93■□□□□ 0.78
CLIP3-206ENST00000593074 CADM1Q9BY67 442 aaKnown RBP19.93■□□□□ 0.78
CLIP3-206ENST00000593074 FAM96AQ9H5X1 160 aa19.93■□□□□ 0.78
CLIP3-206ENST00000593074 SP110Q9HB58 689 aa19.93■□□□□ 0.78
CLIP3-206ENST00000593074 NT5MQ9NPB1 228 aa19.93■□□□□ 0.78
CLIP3-206ENST00000593074 TANC1Q9C0D5 1861 aa19.93■□□□□ 0.78
CLIP3-206ENST00000593074 ESRRAP11474 423 aaPredicted RBP19.93■□□□□ 0.78
CLIP3-206ENST00000593074 DNAJB1P25685 340 aa19.93■□□□□ 0.78
CLIP3-206ENST00000593074 MNX1P50219 401 aaPredicted RBP19.93■□□□□ 0.78
CLIP3-206ENST00000593074 MTA1Q13330 715 aa19.93■□□□□ 0.78
CLIP3-206ENST00000593074 TUBB3Q13509 450 aa19.93■□□□□ 0.78
CLIP3-206ENST00000593074 PARP15Q460N3 678 aa19.93■□□□□ 0.78
CLIP3-206ENST00000593074 SLC8B1Q6J4K2 584 aa19.93■□□□□ 0.78
CLIP3-206ENST00000593074 TREML1Q86YW5 311 aa19.93■□□□□ 0.78
CLIP3-206ENST00000593074 DENND6AQ8IWF6 608 aa19.93■□□□□ 0.78
CLIP3-206ENST00000593074 PSMG2Q969U7 264 aa19.93■□□□□ 0.78
CLIP3-206ENST00000593074 TADA1Q96BN2 335 aa19.93■□□□□ 0.78
CLIP3-206ENST00000593074 RANBP9Q96S59 729 aa19.93■□□□□ 0.78
CLIP3-206ENST00000593074 TTLL2Q9BWV7 592 aa19.93■□□□□ 0.78
CLIP3-206ENST00000593074 ATXN3LQ9H3M9 355 aa19.93■□□□□ 0.78
CLIP3-206ENST00000593074 MTRRQ9UBK8 725 aa19.93■□□□□ 0.78
CLIP3-206ENST00000593074 MID2Q9UJV3 735 aa19.93■□□□□ 0.78
CLIP3-206ENST00000593074 PCDHB12Q9Y5F1 795 aa19.93■□□□□ 0.78
CLIP3-206ENST00000593074 SCN5AQ14524 2016 aa19.92■□□□□ 0.78
CLIP3-206ENST00000593074 BPTFQ12830 3046 aa19.92■□□□□ 0.78
CLIP3-206ENST00000593074 MIA3Q5JRA6 1907 aa19.92■□□□□ 0.78
CLIP3-206ENST00000593074 TLR5O60602 858 aa19.92■□□□□ 0.78
CLIP3-206ENST00000593074 H2AFYO75367 372 aaKnown RBP19.92■□□□□ 0.78
CLIP3-206ENST00000593074 EFEMP2O95967 443 aa19.92■□□□□ 0.78
CLIP3-206ENST00000593074 MMP2P08253 660 aa19.92■□□□□ 0.78
CLIP3-206ENST00000593074 SLC35E2BP0CK96 405 aa19.92■□□□□ 0.78
CLIP3-206ENST00000593074 ATF6P18850 670 aa19.92■□□□□ 0.78
CLIP3-206ENST00000593074 SLC1A2P43004 574 aa19.92■□□□□ 0.78
CLIP3-206ENST00000593074 USP10Q14694 798 aaKnown RBP19.92■□□□□ 0.78
CLIP3-206ENST00000593074 CNGA3Q16281 694 aa19.92■□□□□ 0.78
CLIP3-206ENST00000593074 PCSK7Q16549 785 aa19.92■□□□□ 0.78
CLIP3-206ENST00000593074 PREPLQ4J6C6 727 aaPredicted RBP19.92■□□□□ 0.78
CLIP3-206ENST00000593074 CNKSR3Q6P9H4 555 aa19.92■□□□□ 0.78
CLIP3-206ENST00000593074 C2CD4AQ8NCU7 369 aaPredicted RBP19.92■□□□□ 0.78
CLIP3-206ENST00000593074 RDH11Q8TC12 318 aa19.92■□□□□ 0.78
CLIP3-206ENST00000593074 RPRD1AQ96P16 312 aaPredicted RBP19.92■□□□□ 0.78
CLIP3-206ENST00000593074 KLHL5Q96PQ7 755 aa19.92■□□□□ 0.78
CLIP3-206ENST00000593074 FAM167BQ9BTA0 163 aa19.92■□□□□ 0.78
CLIP3-206ENST00000593074 UBE2OQ9C0C9 1292 aaKnown RBP19.92■□□□□ 0.78
CLIP3-206ENST00000593074 CWH43Q9H720 699 aa19.92■□□□□ 0.78
CLIP3-206ENST00000593074 CCSER2Q9H7U1 834 aa19.92■□□□□ 0.78
CLIP3-206ENST00000593074 TLK1Q9UKI8 766 aa19.92■□□□□ 0.78
CLIP3-206ENST00000593074 SORCS3Q9UPU3 1222 aa19.92■□□□□ 0.78
CLIP3-206ENST00000593074 BACE2Q9Y5Z0 518 aa19.92■□□□□ 0.78
CLIP3-206ENST00000593074 HEATR9A2RTY3 570 aa19.91■□□□□ 0.78
CLIP3-206ENST00000593074 TMEM114B3SHH9 223 aa19.91■□□□□ 0.78
CLIP3-206ENST00000593074 ADAM12O43184 909 aa19.91■□□□□ 0.78
CLIP3-206ENST00000593074 RAMP2O60895 175 aa19.91■□□□□ 0.78
CLIP3-206ENST00000593074 HMBSP08397 361 aa19.91■□□□□ 0.78
CLIP3-206ENST00000593074 OR1D2P34982 312 aa19.91■□□□□ 0.78
CLIP3-206ENST00000593074 MAPKAPK2P49137 400 aa19.91■□□□□ 0.78
CLIP3-206ENST00000593074 KPNA1P52294 538 aaPredicted RBP19.91■□□□□ 0.78
CLIP3-206ENST00000593074 MPP1Q00013 466 aa19.91■□□□□ 0.78
CLIP3-206ENST00000593074 CTBP1Q13363 440 aa19.91■□□□□ 0.78
CLIP3-206ENST00000593074 NADSYN1Q6IA69 706 aa19.91■□□□□ 0.78
CLIP3-206ENST00000593074 KIAA1841Q6NSI8 718 aa19.91■□□□□ 0.78
CLIP3-206ENST00000593074 RAPH1Q70E73 1250 aa19.91■□□□□ 0.78
CLIP3-206ENST00000593074 MAVSQ7Z434 540 aa19.91■□□□□ 0.78
CLIP3-206ENST00000593074 KDELC2Q7Z4H8 507 aa19.91■□□□□ 0.78
CLIP3-206ENST00000593074 PABPC5Q96DU9 382 aaKnown RBP19.91■□□□□ 0.78
CLIP3-206ENST00000593074 CCDC106Q9BWC9 280 aa19.91■□□□□ 0.78
CLIP3-206ENST00000593074 DNAJC28Q9NX36 388 aa19.91■□□□□ 0.78
CLIP3-206ENST00000593074 GYG2O15488 501 aa19.91■□□□□ 0.78
CLIP3-206ENST00000593074 COL6A2P12110 1019 aa19.91■□□□□ 0.78
CLIP3-206ENST00000593074 CD86P42081 329 aa19.91■□□□□ 0.78
CLIP3-206ENST00000593074 TUFMP49411 452 aaKnown RBP19.91■□□□□ 0.78
CLIP3-206ENST00000593074 MAXP61244 160 aa19.91■□□□□ 0.78
CLIP3-206ENST00000593074 IL10RBQ08334 325 aa19.91■□□□□ 0.78
CLIP3-206ENST00000593074 MSLNQ13421 630 aaPredicted RBP19.91■□□□□ 0.78
CLIP3-206ENST00000593074 SERINC3Q13530 473 aa19.91■□□□□ 0.78
CLIP3-206ENST00000593074 SLC12A1Q13621 1099 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms