RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 PALMO75781 387 aa6.56□□□□□ -1.36
VPS4B-205ENST00000591383 KAT7O95251 611 aa6.56□□□□□ -1.36
VPS4B-205ENST00000591383 PGRP06401 933 aa6.56□□□□□ -1.36
VPS4B-205ENST00000591383 DCNP07585 359 aaKnown RBP6.56□□□□□ -1.36
VPS4B-205ENST00000591383 PABPC1P11940 636 aaKnown RBP6.56□□□□□ -1.36
VPS4B-205ENST00000591383 GLULP15104 373 aa6.56□□□□□ -1.36
VPS4B-205ENST00000591383 GOT1P17174 413 aa6.56□□□□□ -1.36
VPS4B-205ENST00000591383 OR1E1P30953 314 aa6.56□□□□□ -1.36
VPS4B-205ENST00000591383 CD70P32970 193 aa6.56□□□□□ -1.36
VPS4B-205ENST00000591383 EIF2DP41214 584 aaKnown RBP6.56□□□□□ -1.36
VPS4B-205ENST00000591383 CSKP41240 450 aa6.56□□□□□ -1.36
VPS4B-205ENST00000591383 ARHGAP25P42331 645 aa6.56□□□□□ -1.36
VPS4B-205ENST00000591383 MARCKSL1P49006 195 aa6.56□□□□□ -1.36
VPS4B-205ENST00000591383 HADHBP55084 474 aaKnown RBP6.56□□□□□ -1.36
VPS4B-205ENST00000591383 CDH6P55285 790 aa6.56□□□□□ -1.36
VPS4B-205ENST00000591383 LMAN2Q12907 356 aa6.56□□□□□ -1.36
VPS4B-205ENST00000591383 ZNF177Q13360 481 aaPredicted RBP6.56□□□□□ -1.36
VPS4B-205ENST00000591383 ACAP1Q15027 740 aa6.56□□□□□ -1.36
VPS4B-205ENST00000591383 C21orf62-AS1Q17RA5 79 aa6.56□□□□□ -1.36
VPS4B-205ENST00000591383 GEN1Q17RS7 908 aa6.56□□□□□ -1.36
VPS4B-205ENST00000591383 LONRF2Q1L5Z9 754 aa6.56□□□□□ -1.36
VPS4B-205ENST00000591383 FUT11Q495W5 492 aa6.56□□□□□ -1.36
VPS4B-205ENST00000591383 PREPLQ4J6C6 727 aaPredicted RBP6.56□□□□□ -1.36
VPS4B-205ENST00000591383 FNDC3BQ53EP0 1204 aaKnown RBP6.56□□□□□ -1.36
VPS4B-205ENST00000591383 ALFQ53S48 1182 aa6.56□□□□□ -1.36
VPS4B-205ENST00000591383 ERMARDQ5T6L9 678 aa6.56□□□□□ -1.36
VPS4B-205ENST00000591383 MANEALQ5VSG8 457 aa6.56□□□□□ -1.36
VPS4B-205ENST00000591383 RNF219Q5W0B1 726 aaPredicted RBP6.56□□□□□ -1.36
VPS4B-205ENST00000591383 RFX8Q6ZV50 586 aa6.56□□□□□ -1.36
VPS4B-205ENST00000591383 CHST9Q7L1S5 443 aa6.56□□□□□ -1.36
VPS4B-205ENST00000591383 CCDC50Q8IVM0 306 aa6.56□□□□□ -1.36
VPS4B-205ENST00000591383 RHOT1Q8IXI2 618 aa6.56□□□□□ -1.36
VPS4B-205ENST00000591383 CCDC105Q8IYK2 499 aa6.56□□□□□ -1.36
VPS4B-205ENST00000591383 ZNF683Q8IZ20 524 aa6.56□□□□□ -1.36
VPS4B-205ENST00000591383 ADGRG2Q8IZP9 1017 aa6.56□□□□□ -1.36
VPS4B-205ENST00000591383 SYCE1Q8N0S2 351 aa6.56□□□□□ -1.36
VPS4B-205ENST00000591383 WFIKKN2Q8TEU8 576 aa6.56□□□□□ -1.36
VPS4B-205ENST00000591383 TEKT4Q8WW24 435 aa6.56□□□□□ -1.36
VPS4B-205ENST00000591383 AZIN2Q96A70 460 aa6.56□□□□□ -1.36
VPS4B-205ENST00000591383 ERLEC1Q96DZ1 483 aa6.56□□□□□ -1.36
VPS4B-205ENST00000591383 KLHDC7BQ96G42 594 aa6.56□□□□□ -1.36
VPS4B-205ENST00000591383 PPP1R9BQ96SB3 815 aa6.56□□□□□ -1.36
VPS4B-205ENST00000591383 MAGEB5Q9BZ81 275 aa6.56□□□□□ -1.36
VPS4B-205ENST00000591383 EPHX3Q9H6B9 360 aa6.56□□□□□ -1.36
VPS4B-205ENST00000591383 PCDH18Q9HCL0 1135 aa6.56□□□□□ -1.36
VPS4B-205ENST00000591383 TRMT1Q9NXH9 659 aaKnown RBP6.56□□□□□ -1.36
VPS4B-205ENST00000591383 KLHL3Q9UH77 587 aa6.56□□□□□ -1.36
VPS4B-205ENST00000591383 VPS28Q9UK41 221 aa6.56□□□□□ -1.36
VPS4B-205ENST00000591383 ADAM30Q9UKF2 790 aa6.56□□□□□ -1.36
VPS4B-205ENST00000591383 CLEC4EQ9ULY5 219 aa6.56□□□□□ -1.36
VPS4B-205ENST00000591383 PYCARDQ9ULZ3 195 aa6.56□□□□□ -1.36
VPS4B-205ENST00000591383 NEU3Q9UQ49 428 aa6.56□□□□□ -1.36
VPS4B-205ENST00000591383 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.56□□□□□ -1.36
VPS4B-205ENST00000591383 SHROOM3Q8TF72 1996 aa6.56□□□□□ -1.36
VPS4B-205ENST00000591383 IGLV3-10A0A075B6K4 115 aa6.55□□□□□ -1.36
VPS4B-205ENST00000591383 FAM170BA6NMN3 283 aa6.55□□□□□ -1.36
VPS4B-205ENST00000591383 ZSCAN12O43309 604 aa6.55□□□□□ -1.36
VPS4B-205ENST00000591383 MFSD11O43934 449 aa6.55□□□□□ -1.36
VPS4B-205ENST00000591383 RAMP2O60895 175 aa6.55□□□□□ -1.36
VPS4B-205ENST00000591383 KLF8O95600 359 aaPredicted RBP6.55□□□□□ -1.36
VPS4B-205ENST00000591383 ALBP02768 609 aa6.55□□□□□ -1.36
VPS4B-205ENST00000591383 CD48P09326 243 aa6.55□□□□□ -1.36
VPS4B-205ENST00000591383 DRD1P21728 446 aa6.55□□□□□ -1.36
VPS4B-205ENST00000591383 HLA-FP30511 346 aa6.55□□□□□ -1.36
VPS4B-205ENST00000591383 L1CAMP32004 1257 aa6.55□□□□□ -1.36
VPS4B-205ENST00000591383 GRIA2P42262 883 aa6.55□□□□□ -1.36
VPS4B-205ENST00000591383 WASP42768 502 aa6.55□□□□□ -1.36
VPS4B-205ENST00000591383 SLC1A1P43005 524 aa6.55□□□□□ -1.36
VPS4B-205ENST00000591383 MAPKAPK2P49137 400 aa6.55□□□□□ -1.36
VPS4B-205ENST00000591383 GALK1P51570 392 aa6.55□□□□□ -1.36
VPS4B-205ENST00000591383 MLLT6P55198 1093 aaPredicted RBP6.55□□□□□ -1.36
VPS4B-205ENST00000591383 CDH4P55283 916 aa6.55□□□□□ -1.36
VPS4B-205ENST00000591383 STARD6P59095 220 aa6.55□□□□□ -1.36
VPS4B-205ENST00000591383 DYNLT1P63172 113 aa6.55□□□□□ -1.36
VPS4B-205ENST00000591383 SLC7A5Q01650 507 aa6.55□□□□□ -1.36
VPS4B-205ENST00000591383 NRG1Q02297 640 aaPredicted RBP6.55□□□□□ -1.36
VPS4B-205ENST00000591383 SEMA3BQ13214 749 aa6.55□□□□□ -1.36
VPS4B-205ENST00000591383 DPYSQ14117 519 aa6.55□□□□□ -1.36
VPS4B-205ENST00000591383 DPYSL3Q14195 570 aa6.55□□□□□ -1.36
VPS4B-205ENST00000591383 DPYSL2Q16555 572 aa6.55□□□□□ -1.36
VPS4B-205ENST00000591383 BOLA3Q53S33 107 aa6.55□□□□□ -1.36
VPS4B-205ENST00000591383 FSCBQ5H9T9 825 aa6.55□□□□□ -1.36
VPS4B-205ENST00000591383 TMEM196Q5HYL7 178 aa6.55□□□□□ -1.36
VPS4B-205ENST00000591383 PITRM1Q5JRX3 1037 aa6.55□□□□□ -1.36
VPS4B-205ENST00000591383 MPP7Q5T2T1 576 aa6.55□□□□□ -1.36
VPS4B-205ENST00000591383 ACBD5Q5T8D3 534 aaPredicted RBP6.55□□□□□ -1.36
VPS4B-205ENST00000591383 MBLAC2Q68D91 279 aa6.55□□□□□ -1.36
VPS4B-205ENST00000591383 CXorf57Q6NSI4 855 aaKnown RBP6.55□□□□□ -1.36
VPS4B-205ENST00000591383 PEX26Q7Z412 305 aa6.55□□□□□ -1.36
VPS4B-205ENST00000591383 POLNQ7Z5Q5 900 aa6.55□□□□□ -1.36
VPS4B-205ENST00000591383 CACUL1Q86Y37 369 aa6.55□□□□□ -1.36
VPS4B-205ENST00000591383 RFX6Q8HWS3 928 aa6.55□□□□□ -1.36
VPS4B-205ENST00000591383 PSTKQ8IV42 348 aaKnown RBP6.55□□□□□ -1.36
VPS4B-205ENST00000591383 AHI1Q8N157 1196 aa6.55□□□□□ -1.36
VPS4B-205ENST00000591383 ZNF513Q8N8E2 541 aaPredicted RBP6.55□□□□□ -1.36
VPS4B-205ENST00000591383 RTL3Q8N8U3 475 aaKnown RBP6.55□□□□□ -1.36
VPS4B-205ENST00000591383 ZNF557Q8N988 423 aaPredicted RBP6.55□□□□□ -1.36
VPS4B-205ENST00000591383 NETO2Q8NC67 525 aa6.55□□□□□ -1.36
VPS4B-205ENST00000591383 KCTD6Q8NC69 237 aa6.55□□□□□ -1.36
VPS4B-205ENST00000591383 OR7D4Q8NG98 312 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms