RNA–Protein interactions for RNA: ENST00000590608.1

ATP9B-223, Transcript of ATPase phospholipid transporting 9B (putative), human

TSL 3

Gene ATP9B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP9B-223	ENST00000590608	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	5.19	□□□□□ -1.58
ATP9B-223	ENST00000590608	SLC16A11	Q8NCK7	471 aa		5.19	□□□□□ -1.58
ATP9B-223	ENST00000590608	LINC00476	Q8WZB0	136 aa		5.19	□□□□□ -1.58
ATP9B-223	ENST00000590608	FAM149B1	Q96BN6	582 aa		5.19	□□□□□ -1.58
ATP9B-223	ENST00000590608	REPS1	Q96D71	796 aa		5.19	□□□□□ -1.58
ATP9B-223	ENST00000590608	ABHD1	Q96SE0	405 aa		5.19	□□□□□ -1.58
ATP9B-223	ENST00000590608	IFT27	Q9BW83	186 aa		5.19	□□□□□ -1.58
ATP9B-223	ENST00000590608	TM2D2	Q9BX73	214 aa		5.19	□□□□□ -1.58
ATP9B-223	ENST00000590608	NDST4	Q9H3R1	872 aa		5.19	□□□□□ -1.58
ATP9B-223	ENST00000590608	KIF9	Q9HAQ2	790 aa		5.19	□□□□□ -1.58
ATP9B-223	ENST00000590608	ZNF304	Q9HCX3	659 aa		5.19	□□□□□ -1.58
ATP9B-223	ENST00000590608	SLC6A13	Q9NSD5	602 aa		5.19	□□□□□ -1.58
ATP9B-223	ENST00000590608	GAR1	Q9NY12	217 aa	Known RBP	5.19	□□□□□ -1.58
ATP9B-223	ENST00000590608	A4GNT	Q9UNA3	340 aa		5.19	□□□□□ -1.58
ATP9B-223	ENST00000590608	PCDHGB5	Q9Y5G0	923 aa		5.19	□□□□□ -1.58
ATP9B-223	ENST00000590608	EMSY	Q7Z589	1322 aa		5.19	□□□□□ -1.58
ATP9B-223	ENST00000590608	KAT6A	Q92794	2004 aa		5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	CCDC151	A5D8V7	595 aa		5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	LRRC53	A6NM62	1247 aa		5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608		H7C0S8	307 aa		5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	SMIM22	K7EJ46	135 aa		5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	MASP2	O00187	686 aa		5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	MSI1	O43347	362 aa	Known RBP	5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	ESRRB	O95718	433 aa		5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	KRT10	P13645	584 aa		5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	SLC2A4	P14672	509 aa		5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	ZNF8	P17098	575 aa	Predicted RBP	5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	GABRB1	P18505	474 aa		5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	KLRC2	P26717	231 aa		5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	COPB2	P35606	906 aa		5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	PIP4K2A	P48426	406 aa	Predicted RBP	5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	PPP5C	P53041	499 aa		5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	CLDN2	P57739	230 aa		5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	ROR1	Q01973	937 aa		5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	CSTF3	Q12996	717 aa	Known RBP	5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	GALNT3	Q14435	633 aa		5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	FGFBP1	Q14512	234 aa		5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	RNPS1	Q15287	305 aa	Known RBP	5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	FAM153C	Q494X1	144 aa		5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	PLEKHS1	Q5SXH7	462 aa		5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	ATG9B	Q674R7	924 aa		5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	TXNDC8	Q6A555	127 aa		5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	IGFL4	Q6B9Z1	124 aa		5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	NAA16	Q6N069	864 aa	Predicted RBP	5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	TMEM154	Q6P9G4	183 aa		5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	PRPF39	Q86UA1	669 aa	Known RBP	5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	CCDC25	Q86WR0	208 aa		5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	CCDC105	Q8IYK2	499 aa		5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	KIAA2013	Q8IYS2	634 aa		5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	PAQR4	Q8N4S7	273 aa	Predicted RBP	5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	GPR150	Q8NGU9	434 aa		5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	PIGK	Q92643	395 aa		5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	ZNF764	Q96H86	408 aa	Predicted RBP	5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	PDLIM2	Q96JY6	352 aa		5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	CNDP2	Q96KP4	475 aa	Known RBP	5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	BBC3	Q96PG8	261 aa	Predicted RBP	5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	FCRL5	Q96RD9	977 aa		5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	BBS4	Q96RK4	519 aa		5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	STRA6	Q9BX79	667 aa		5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	KLHL4	Q9C0H6	718 aa		5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	MMRN2	Q9H8L6	949 aa		5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	CYP4F11	Q9HBI6	524 aa		5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	CCDC177	Q9NQR7	707 aa	Predicted RBP	5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	PLK2	Q9NYY3	685 aa		5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	NCKIPSD	Q9NZQ3	722 aa		5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	MRPL15	Q9P015	296 aa	Known RBP	5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	SUCLA2	Q9P2R7	463 aa	Predicted RBP	5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	CNOT8	Q9UFF9	292 aa	Known RBP	5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	ADAM21	Q9UKJ8	722 aa		5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	TNFSF13B	Q9Y275	285 aa		5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	FAM169A	Q9Y6X4	670 aa		5.18	□□□□□ -1.58
ATP9B-223	ENST00000590608	CBY3	A6NI87	242 aa		5.17	□□□□□ -1.58
ATP9B-223	ENST00000590608	FAM90A8P	A6NJQ4	464 aa		5.17	□□□□□ -1.58
ATP9B-223	ENST00000590608		A8MZ25	164 aa		5.17	□□□□□ -1.58
ATP9B-223	ENST00000590608	KCNJ18	B7U540	433 aa		5.17	□□□□□ -1.58
ATP9B-223	ENST00000590608	NPIPB11	E5RHQ5	1161 aa		5.17	□□□□□ -1.58
ATP9B-223	ENST00000590608	UBE2C	O00762	179 aa		5.17	□□□□□ -1.58
ATP9B-223	ENST00000590608	CTDSP2	O14595	271 aa		5.17	□□□□□ -1.58
ATP9B-223	ENST00000590608	NFATC1	O95644	943 aa		5.17	□□□□□ -1.58
ATP9B-223	ENST00000590608	HSPA4L	O95757	839 aa		5.17	□□□□□ -1.58
ATP9B-223	ENST00000590608	SLPI	P03973	132 aa		5.17	□□□□□ -1.58
ATP9B-223	ENST00000590608	RPN1	P04843	607 aa	Known RBP	5.17	□□□□□ -1.58
ATP9B-223	ENST00000590608	HEXA	P06865	529 aa		5.17	□□□□□ -1.58
ATP9B-223	ENST00000590608	FAM90A13P	P0C7W8	464 aa		5.17	□□□□□ -1.58
ATP9B-223	ENST00000590608	FAM90A24P	P0C7X0	464 aa		5.17	□□□□□ -1.58
ATP9B-223	ENST00000590608	SELL	P14151	372 aa		5.17	□□□□□ -1.58
ATP9B-223	ENST00000590608	ACVRL1	P37023	503 aa		5.17	□□□□□ -1.58
ATP9B-223	ENST00000590608	BLK	P51451	505 aa		5.17	□□□□□ -1.58
ATP9B-223	ENST00000590608	HDAC4	P56524	1084 aa		5.17	□□□□□ -1.58
ATP9B-223	ENST00000590608	YPEL5	P62699	121 aa		5.17	□□□□□ -1.58
ATP9B-223	ENST00000590608	UBXN2A	P68543	259 aa		5.17	□□□□□ -1.58
ATP9B-223	ENST00000590608	BLOC1S1	P78537	153 aa		5.17	□□□□□ -1.58
ATP9B-223	ENST00000590608	HOXA4	Q00056	320 aa	Predicted RBP	5.17	□□□□□ -1.58
ATP9B-223	ENST00000590608	GRIK3	Q13003	919 aa		5.17	□□□□□ -1.58
ATP9B-223	ENST00000590608	ZNF169	Q14929	603 aa	Predicted RBP	5.17	□□□□□ -1.58
ATP9B-223	ENST00000590608	ASTE1	Q2TB18	679 aa	Predicted RBP	5.17	□□□□□ -1.58
ATP9B-223	ENST00000590608	TBC1D9B	Q66K14	1250 aa		5.17	□□□□□ -1.58
ATP9B-223	ENST00000590608	HIST2H2BC	Q6DN03	193 aa		5.17	□□□□□ -1.58
ATP9B-223	ENST00000590608	HIST2H2BD	Q6DRA6	164 aa		5.17	□□□□□ -1.58
ATP9B-223	ENST00000590608	FBXO42	Q6P3S6	717 aa		5.17	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms