RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 TRPV2Q9Y5S1 764 aa17.31■□□□□ 0.36
SMARCA4-215ENST00000590574 MYH11P35749 1972 aa17.3■□□□□ 0.36
SMARCA4-215ENST00000590574 KLF11O14901 512 aa17.3■□□□□ 0.36
SMARCA4-215ENST00000590574 SPTLC1O15269 473 aa17.3■□□□□ 0.36
SMARCA4-215ENST00000590574 MAXP61244 160 aa17.3■□□□□ 0.36
SMARCA4-215ENST00000590574 SLC5A9Q2M3M2 681 aa17.3■□□□□ 0.36
SMARCA4-215ENST00000590574 HORMAD1Q86X24 394 aa17.3■□□□□ 0.36
SMARCA4-215ENST00000590574 NXNL1Q96CM4 212 aa17.3■□□□□ 0.36
SMARCA4-215ENST00000590574 RNF145Q96MT1 663 aa17.3■□□□□ 0.36
SMARCA4-215ENST00000590574 C9orf16Q9BUW7 83 aa17.3■□□□□ 0.36
SMARCA4-215ENST00000590574 FBXO44Q9H4M3 255 aa17.3■□□□□ 0.36
SMARCA4-215ENST00000590574 FAM124BQ9H5Z6 455 aaPredicted RBP17.3■□□□□ 0.36
SMARCA4-215ENST00000590574 ZNF358Q9NW07 568 aa17.3■□□□□ 0.36
SMARCA4-215ENST00000590574 MTF2Q9Y483 593 aaPredicted RBP17.3■□□□□ 0.36
SMARCA4-215ENST00000590574 M0R3G1 203 aa17.3■□□□□ 0.36
SMARCA4-215ENST00000590574 BTN3A1O00481 513 aa17.3■□□□□ 0.36
SMARCA4-215ENST00000590574 KATNA1O75449 491 aa17.3■□□□□ 0.36
SMARCA4-215ENST00000590574 ARIH2O95376 493 aa17.3■□□□□ 0.36
SMARCA4-215ENST00000590574 PTPN3P26045 913 aa17.3■□□□□ 0.36
SMARCA4-215ENST00000590574 AQP4P55087 323 aa17.3■□□□□ 0.36
SMARCA4-215ENST00000590574 HUNKP57058 714 aa17.3■□□□□ 0.36
SMARCA4-215ENST00000590574 SOWAHAQ2M3V2 549 aa17.3■□□□□ 0.36
SMARCA4-215ENST00000590574 ZYG11AQ6WRX3 759 aa17.3■□□□□ 0.36
SMARCA4-215ENST00000590574 CCDC81Q6ZN84 652 aa17.3■□□□□ 0.36
SMARCA4-215ENST00000590574 PLD3Q8IV08 490 aa17.3■□□□□ 0.36
SMARCA4-215ENST00000590574 TRPC4APQ8TEL6 797 aa17.3■□□□□ 0.36
SMARCA4-215ENST00000590574 BCORQ6W2J9 1755 aa17.3■□□□□ 0.36
SMARCA4-215ENST00000590574 MMP3P08254 477 aa17.3■□□□□ 0.36
SMARCA4-215ENST00000590574 INPP1P49441 399 aa17.3■□□□□ 0.36
SMARCA4-215ENST00000590574 DENND1AQ8TEH3 1009 aa17.3■□□□□ 0.36
SMARCA4-215ENST00000590574 ARAP2Q8WZ64 1704 aa17.3■□□□□ 0.36
SMARCA4-215ENST00000590574 NSMCE2Q96MF7 247 aa17.3■□□□□ 0.36
SMARCA4-215ENST00000590574 ASB2Q96Q27 587 aa17.3■□□□□ 0.36
SMARCA4-215ENST00000590574 GMLQ99445 158 aa17.3■□□□□ 0.36
SMARCA4-215ENST00000590574 TK2O00142 265 aa17.3■□□□□ 0.36
SMARCA4-215ENST00000590574 LDLRP01130 860 aa17.3■□□□□ 0.36
SMARCA4-215ENST00000590574 F7P08709 466 aaPredicted RBP17.3■□□□□ 0.36
SMARCA4-215ENST00000590574 RABGGTBP53611 331 aa17.3■□□□□ 0.36
SMARCA4-215ENST00000590574 NUP107P57740 925 aa17.3■□□□□ 0.36
SMARCA4-215ENST00000590574 NCBP2-AS2Q69YL0 99 aa17.3■□□□□ 0.36
SMARCA4-215ENST00000590574 SZRD1Q7Z422 152 aa17.3■□□□□ 0.36
SMARCA4-215ENST00000590574 FIG4Q92562 907 aa17.3■□□□□ 0.36
SMARCA4-215ENST00000590574 HAPLN2Q9GZV7 340 aa17.3■□□□□ 0.36
SMARCA4-215ENST00000590574 EIF2B3Q9NR50 452 aaKnown RBP17.3■□□□□ 0.36
SMARCA4-215ENST00000590574 DARSP14868 501 aaKnown RBP17.29■□□□□ 0.36
SMARCA4-215ENST00000590574 GTF2H3Q13889 308 aa17.29■□□□□ 0.36
SMARCA4-215ENST00000590574 DLG2Q15700 870 aa17.29■□□□□ 0.36
SMARCA4-215ENST00000590574 NEDD8Q15843 81 aa17.29■□□□□ 0.36
SMARCA4-215ENST00000590574 NFE2Q16621 373 aaPredicted RBP17.29■□□□□ 0.36
SMARCA4-215ENST00000590574 FSCN1Q16658 493 aaKnown RBP17.29■□□□□ 0.36
SMARCA4-215ENST00000590574 LSM12Q3MHD2 195 aaKnown RBP17.29■□□□□ 0.36
SMARCA4-215ENST00000590574 METTL21CQ5VZV1 264 aa17.29■□□□□ 0.36
SMARCA4-215ENST00000590574 ACOX2Q99424 681 aa17.29■□□□□ 0.36
SMARCA4-215ENST00000590574 COLEC11Q9BWP8 271 aa17.29■□□□□ 0.36
SMARCA4-215ENST00000590574 TLR8Q9NR97 1041 aaKnown RBP17.29■□□□□ 0.36
SMARCA4-215ENST00000590574 CATSPERZQ9NTU4 200 aa17.29■□□□□ 0.36
SMARCA4-215ENST00000590574 SIX4Q9UIU6 781 aa17.29■□□□□ 0.36
SMARCA4-215ENST00000590574 POMPQ9Y244 141 aa17.29■□□□□ 0.36
SMARCA4-215ENST00000590574 KDM1AO60341 852 aa17.29■□□□□ 0.36
SMARCA4-215ENST00000590574 TOP3BO95985 862 aaKnown RBP17.29■□□□□ 0.36
SMARCA4-215ENST00000590574 NELFEP18615 380 aaKnown RBP17.29■□□□□ 0.36
SMARCA4-215ENST00000590574 NMBRP28336 390 aa17.29■□□□□ 0.36
SMARCA4-215ENST00000590574 MPP1Q00013 466 aa17.29■□□□□ 0.36
SMARCA4-215ENST00000590574 CDC16Q13042 620 aa17.29■□□□□ 0.36
SMARCA4-215ENST00000590574 LIN52Q52LA3 116 aa17.29■□□□□ 0.36
SMARCA4-215ENST00000590574 GATA5Q9BWX5 397 aaPredicted RBP17.29■□□□□ 0.36
SMARCA4-215ENST00000590574 PNPLA8Q9NP80 782 aa17.29■□□□□ 0.36
SMARCA4-215ENST00000590574 SEPT3Q9UH03 358 aa17.29■□□□□ 0.36
SMARCA4-215ENST00000590574 LAMB1P07942 1786 aa17.29■□□□□ 0.36
SMARCA4-215ENST00000590574 MYH7BA7E2Y1 1941 aa17.29■□□□□ 0.36
SMARCA4-215ENST00000590574 RGS20O76081 388 aa17.29■□□□□ 0.36
SMARCA4-215ENST00000590574 RHOCP08134 193 aa17.29■□□□□ 0.36
SMARCA4-215ENST00000590574 DLDP09622 509 aaKnown RBP17.29■□□□□ 0.36
SMARCA4-215ENST00000590574 IRF9Q00978 393 aa17.29■□□□□ 0.36
SMARCA4-215ENST00000590574 CWF19L1Q69YN2 538 aaKnown RBP17.29■□□□□ 0.36
SMARCA4-215ENST00000590574 MYO1HQ8N1T3 1032 aa17.29■□□□□ 0.36
SMARCA4-215ENST00000590574 OSCP1Q8WVF1 389 aa17.29■□□□□ 0.36
SMARCA4-215ENST00000590574 SCN3BQ9NY72 215 aa17.29■□□□□ 0.36
SMARCA4-215ENST00000590574 SFMBT1Q9UHJ3 866 aa17.29■□□□□ 0.36
SMARCA4-215ENST00000590574 SYNCRIPO60506 623 aaKnown RBP17.29■□□□□ 0.36
SMARCA4-215ENST00000590574 LBPP18428 481 aa17.29■□□□□ 0.36
SMARCA4-215ENST00000590574 PRDX6P30041 224 aa17.29■□□□□ 0.36
SMARCA4-215ENST00000590574 RAB27AP51159 221 aa17.29■□□□□ 0.36
SMARCA4-215ENST00000590574 NR1H2P55055 460 aa17.29■□□□□ 0.36
SMARCA4-215ENST00000590574 GLT6D1Q7Z4J2 308 aa17.29■□□□□ 0.36
SMARCA4-215ENST00000590574 GPR142Q7Z601 462 aa17.29■□□□□ 0.36
SMARCA4-215ENST00000590574 OR52K2Q8NGK3 314 aa17.29■□□□□ 0.36
SMARCA4-215ENST00000590574 SKA1Q96BD8 255 aa17.29■□□□□ 0.36
SMARCA4-215ENST00000590574 GORASP1Q9BQQ3 440 aa17.29■□□□□ 0.36
SMARCA4-215ENST00000590574 BDH2Q9BUT1 245 aa17.29■□□□□ 0.36
SMARCA4-215ENST00000590574 MPP6Q9NZW5 540 aa17.29■□□□□ 0.36
SMARCA4-215ENST00000590574 ZNF112Q9UJU3 913 aa17.29■□□□□ 0.36
SMARCA4-215ENST00000590574 PCDHGB4Q9UN71 923 aa17.29■□□□□ 0.36
SMARCA4-215ENST00000590574 SNX10Q9Y5X0 201 aa17.29■□□□□ 0.36
SMARCA4-215ENST00000590574 PTCH2Q9Y6C5 1203 aa17.29■□□□□ 0.36
SMARCA4-215ENST00000590574 DOCK2Q92608 1830 aa17.29■□□□□ 0.36
SMARCA4-215ENST00000590574 VPS4BO75351 444 aa17.28■□□□□ 0.36
SMARCA4-215ENST00000590574 DEAF1O75398 565 aaPredicted RBP17.28■□□□□ 0.36
SMARCA4-215ENST00000590574 SLC2A4P14672 509 aa17.28■□□□□ 0.36
SMARCA4-215ENST00000590574 SLC9B1Q4ZJI4 515 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms