RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 WSB2Q9NYS7 404 aaPredicted RBP8.17□□□□□ -1.1
SMAD4-209ENST00000589941 HSFX1Q9UBD0 423 aa8.17□□□□□ -1.1
SMAD4-209ENST00000589941 PCDHGA1Q9Y5H4 931 aa8.17□□□□□ -1.1
SMAD4-209ENST00000589941 E2F8A0AVK6 867 aa8.16□□□□□ -1.1
SMAD4-209ENST00000589941 MYMKA6NI61 221 aa8.16□□□□□ -1.1
SMAD4-209ENST00000589941 LEFTY2O00292 366 aa8.16□□□□□ -1.1
SMAD4-209ENST00000589941 FFAR3O14843 346 aa8.16□□□□□ -1.1
SMAD4-209ENST00000589941 PRPF3O43395 683 aaKnown RBP8.16□□□□□ -1.1
SMAD4-209ENST00000589941 PCDHGA12O60330 932 aa8.16□□□□□ -1.1
SMAD4-209ENST00000589941 LYPLA2O95372 231 aa8.16□□□□□ -1.1
SMAD4-209ENST00000589941 CXCL8P10145 99 aa8.16□□□□□ -1.1
SMAD4-209ENST00000589941 FDPSP14324 419 aaKnown RBP8.16□□□□□ -1.1
SMAD4-209ENST00000589941 NTSR1P30989 418 aa8.16□□□□□ -1.1
SMAD4-209ENST00000589941 TUFMP49411 452 aaKnown RBP8.16□□□□□ -1.1
SMAD4-209ENST00000589941 JAM2P57087 298 aa8.16□□□□□ -1.1
SMAD4-209ENST00000589941 CBX1P83916 185 aa8.16□□□□□ -1.1
SMAD4-209ENST00000589941 STK3Q13188 491 aa8.16□□□□□ -1.1
SMAD4-209ENST00000589941 SAFBQ15424 915 aaKnown RBP eCLIP8.16□□□□□ -1.1
SMAD4-209ENST00000589941 SHBQ15464 509 aa8.16□□□□□ -1.1
SMAD4-209ENST00000589941 IGFBP7Q16270 282 aa8.16□□□□□ -1.1
SMAD4-209ENST00000589941 C21orf62-AS1Q17RA5 79 aa8.16□□□□□ -1.1
SMAD4-209ENST00000589941 FNDC3BQ53EP0 1204 aaKnown RBP8.16□□□□□ -1.1
SMAD4-209ENST00000589941 PRAMEF14Q5SWL7 426 aa8.16□□□□□ -1.1
SMAD4-209ENST00000589941 TEPPQ6URK8 271 aa8.16□□□□□ -1.1
SMAD4-209ENST00000589941 MOXD1Q6UVY6 613 aa8.16□□□□□ -1.1
SMAD4-209ENST00000589941 DSTYKQ6XUX3 929 aa8.16□□□□□ -1.1
SMAD4-209ENST00000589941 KDM7AQ6ZMT4 941 aa8.16□□□□□ -1.1
SMAD4-209ENST00000589941 SYNE3Q6ZMZ3 975 aa8.16□□□□□ -1.1
SMAD4-209ENST00000589941 ARHGAP36Q6ZRI8 547 aa8.16□□□□□ -1.1
SMAD4-209ENST00000589941 KRTAP1-3Q8IUG1 177 aa8.16□□□□□ -1.1
SMAD4-209ENST00000589941 ADGRG2Q8IZP9 1017 aa8.16□□□□□ -1.1
SMAD4-209ENST00000589941 DCBLD1Q8N8Z6 715 aa8.16□□□□□ -1.1
SMAD4-209ENST00000589941 TP53I13Q8NBR0 393 aaPredicted RBP8.16□□□□□ -1.1
SMAD4-209ENST00000589941 LINC00301Q8NCQ3 95 aa8.16□□□□□ -1.1
SMAD4-209ENST00000589941 CCDC148Q8NFR7 591 aa8.16□□□□□ -1.1
SMAD4-209ENST00000589941 KIF18AQ8NI77 898 aa8.16□□□□□ -1.1
SMAD4-209ENST00000589941 DEPTORQ8TB45 409 aa8.16□□□□□ -1.1
SMAD4-209ENST00000589941 SNX19Q92543 992 aa8.16□□□□□ -1.1
SMAD4-209ENST00000589941 VCPIP1Q96JH7 1222 aa8.16□□□□□ -1.1
SMAD4-209ENST00000589941 ZBTB45Q96K62 511 aaPredicted RBP8.16□□□□□ -1.1
SMAD4-209ENST00000589941 CCDC43Q96MW1 224 aaKnown RBP8.16□□□□□ -1.1
SMAD4-209ENST00000589941 YIPF4Q9BSR8 244 aa8.16□□□□□ -1.1
SMAD4-209ENST00000589941 DOCK9Q9BZ29 2069 aa8.16□□□□□ -1.1
SMAD4-209ENST00000589941 NAT10Q9H0A0 1025 aaKnown RBP8.16□□□□□ -1.1
SMAD4-209ENST00000589941 ASCL3Q9NQ33 180 aa8.16□□□□□ -1.1
SMAD4-209ENST00000589941 SMPD4Q9NXE4 827 aa8.16□□□□□ -1.1
SMAD4-209ENST00000589941 NAP1L2Q9ULW6 460 aaPredicted RBP8.16□□□□□ -1.1
SMAD4-209ENST00000589941 ARHGAP26Q9UNA1 814 aa8.16□□□□□ -1.1
SMAD4-209ENST00000589941 SCN8AQ9UQD0 1980 aa8.16□□□□□ -1.1
SMAD4-209ENST00000589941 TNFSF13BQ9Y275 285 aa8.16□□□□□ -1.1
SMAD4-209ENST00000589941 ANKRD6Q9Y2G4 727 aa8.16□□□□□ -1.1
SMAD4-209ENST00000589941 MED13Q9UHV7 2174 aa8.15□□□□□ -1.1
SMAD4-209ENST00000589941 PMS2P1A4D2B8 440 aa8.15□□□□□ -1.1
SMAD4-209ENST00000589941 WASH3PC4AMC7 463 aa8.15□□□□□ -1.1
SMAD4-209ENST00000589941 DTNBO60941 627 aa8.15□□□□□ -1.1
SMAD4-209ENST00000589941 TULP3O75386 442 aa8.15□□□□□ -1.1
SMAD4-209ENST00000589941 DNAJC8O75937 253 aaPredicted RBP8.15□□□□□ -1.1
SMAD4-209ENST00000589941 NOL4O94818 638 aa8.15□□□□□ -1.1
SMAD4-209ENST00000589941 SKILP12757 684 aa8.15□□□□□ -1.1
SMAD4-209ENST00000589941 H2AFXP16104 143 aaPredicted RBP8.15□□□□□ -1.1
SMAD4-209ENST00000589941 KRT15P19012 456 aa8.15□□□□□ -1.1
SMAD4-209ENST00000589941 TYMPP19971 482 aa8.15□□□□□ -1.1
SMAD4-209ENST00000589941 PROZP22891 400 aa8.15□□□□□ -1.1
SMAD4-209ENST00000589941 LRPAP1P30533 357 aa8.15□□□□□ -1.1
SMAD4-209ENST00000589941 EIF2DP41214 584 aaKnown RBP8.15□□□□□ -1.1
SMAD4-209ENST00000589941 TNFRSF4P43489 277 aa8.15□□□□□ -1.1
SMAD4-209ENST00000589941 NAMPTP43490 491 aa8.15□□□□□ -1.1
SMAD4-209ENST00000589941 KCNB1Q14721 858 aa8.15□□□□□ -1.1
SMAD4-209ENST00000589941 GPR19Q15760 415 aa8.15□□□□□ -1.1
SMAD4-209ENST00000589941 TPD52L1Q16890 204 aaPredicted RBP8.15□□□□□ -1.1
SMAD4-209ENST00000589941 LY6G5CQ5SRR4 150 aa8.15□□□□□ -1.1
SMAD4-209ENST00000589941 TAF3Q5VWG9 929 aa8.15□□□□□ -1.1
SMAD4-209ENST00000589941 TCERG1LQ5VWI1 586 aa8.15□□□□□ -1.1
SMAD4-209ENST00000589941 PPP4R3AQ6IN85 833 aa8.15□□□□□ -1.1
SMAD4-209ENST00000589941 ARMCX5Q6P1M9 558 aa8.15□□□□□ -1.1
SMAD4-209ENST00000589941 PTRH1Q86Y79 214 aaKnown RBP8.15□□□□□ -1.1
SMAD4-209ENST00000589941 DRC7Q8IY82 874 aa8.15□□□□□ -1.1
SMAD4-209ENST00000589941 CISD2Q8N5K1 135 aaKnown RBP8.15□□□□□ -1.1
SMAD4-209ENST00000589941 LINC00482Q8N8I6 264 aa8.15□□□□□ -1.1
SMAD4-209ENST00000589941 FSIP1Q8NA03 581 aa8.15□□□□□ -1.1
SMAD4-209ENST00000589941 TERB1Q8NA31 727 aa8.15□□□□□ -1.1
SMAD4-209ENST00000589941 IGSF8Q969P0 613 aa8.15□□□□□ -1.1
SMAD4-209ENST00000589941 ZBTB8AQ96BR9 441 aa8.15□□□□□ -1.1
SMAD4-209ENST00000589941 AIFM3Q96NN9 605 aa8.15□□□□□ -1.1
SMAD4-209ENST00000589941 ACO2Q99798 780 aaKnown RBP8.15□□□□□ -1.1
SMAD4-209ENST00000589941 GABRG3Q99928 467 aa8.15□□□□□ -1.1
SMAD4-209ENST00000589941 HSD17B14Q9BPX1 270 aa8.15□□□□□ -1.1
SMAD4-209ENST00000589941 TARS2Q9BW92 718 aaKnown RBP8.15□□□□□ -1.1
SMAD4-209ENST00000589941 SMURF1Q9HCE7 757 aa8.15□□□□□ -1.1
SMAD4-209ENST00000589941 TM9SF3Q9HD45 589 aa8.15□□□□□ -1.1
SMAD4-209ENST00000589941 USP36Q9P275 1121 aaKnown RBP8.15□□□□□ -1.1
SMAD4-209ENST00000589941 PCDHA7Q9UN72 937 aa8.15□□□□□ -1.1
SMAD4-209ENST00000589941 CLCA2Q9UQC9 943 aa8.15□□□□□ -1.1
SMAD4-209ENST00000589941 NFE2L3Q9Y4A8 694 aa8.15□□□□□ -1.1
SMAD4-209ENST00000589941 TDRD6O60522 2096 aaKnown RBP8.15□□□□□ -1.11
SMAD4-209ENST00000589941 ZNF106Q9H2Y7 1883 aaKnown RBP8.15□□□□□ -1.11
SMAD4-209ENST00000589941 CSMD2Q7Z408 3487 aa8.14□□□□□ -1.11
SMAD4-209ENST00000589941 PHLPP2Q6ZVD8 1323 aa8.14□□□□□ -1.11
SMAD4-209ENST00000589941 A0A1B0GTL3 188 aa8.14□□□□□ -1.11
SMAD4-209ENST00000589941 A0A1W2PNU3 283 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms