RNA–Protein interactions for RNA: ENST00000589937.5

RFX1-207, Transcript of regulatory factor X1, humanhuman

TSL 4

Gene RFX1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-207ENST00000589937 RETSATQ6NUM9 610 aa12.89□□□□□ -0.35
RFX1-207ENST00000589937 SCYL2Q6P3W7 929 aa12.89□□□□□ -0.35
RFX1-207ENST00000589937 C19orf48Q6RUI8 117 aa12.89□□□□□ -0.35
RFX1-207ENST00000589937 RYBPQ8N488 228 aaPredicted RBP12.89□□□□□ -0.35
RFX1-207ENST00000589937 ANKRD20A12PQ8NF67 263 aa12.89□□□□□ -0.35
RFX1-207ENST00000589937 NTAN1Q96AB6 310 aa12.89□□□□□ -0.35
RFX1-207ENST00000589937 SKA1Q96BD8 255 aa12.89□□□□□ -0.35
RFX1-207ENST00000589937 HMCESQ96FZ2 354 aa12.89□□□□□ -0.35
RFX1-207ENST00000589937 EXOC2Q96KP1 924 aa12.89□□□□□ -0.35
RFX1-207ENST00000589937 PEBP4Q96S96 227 aa12.89□□□□□ -0.35
RFX1-207ENST00000589937 HEPHQ9BQS7 1158 aa12.89□□□□□ -0.35
RFX1-207ENST00000589937 CCDC86Q9H6F5 360 aaKnown RBP12.89□□□□□ -0.35
RFX1-207ENST00000589937 HECAQ9UBI9 543 aaPredicted RBP12.89□□□□□ -0.35
RFX1-207ENST00000589937 FADS3Q9Y5Q0 445 aa12.89□□□□□ -0.35
RFX1-207ENST00000589937 RP1P56715 2156 aa12.88□□□□□ -0.35
RFX1-207ENST00000589937 KIF26BQ2KJY2 2108 aa12.88□□□□□ -0.35
RFX1-207ENST00000589937 IGSF10Q6WRI0 2623 aa12.88□□□□□ -0.35
RFX1-207ENST00000589937 LRRC53A6NM62 1247 aa12.88□□□□□ -0.35
RFX1-207ENST00000589937 SIGLEC16A6NMB1 481 aa12.88□□□□□ -0.35
RFX1-207ENST00000589937 INSIG1O15503 277 aa12.88□□□□□ -0.35
RFX1-207ENST00000589937 CREB3O43889 395 aa12.88□□□□□ -0.35
RFX1-207ENST00000589937 ITIH2P19823 946 aa12.88□□□□□ -0.35
RFX1-207ENST00000589937 HNRNPA2B1P22626 353 aaKnown RBP12.88□□□□□ -0.35
RFX1-207ENST00000589937 EPHB2P29323 1055 aa12.88□□□□□ -0.35
RFX1-207ENST00000589937 AKT2P31751 481 aa12.88□□□□□ -0.35
RFX1-207ENST00000589937 L1CAMP32004 1257 aa12.88□□□□□ -0.35
RFX1-207ENST00000589937 ZNF143P52747 638 aaPredicted RBP12.88□□□□□ -0.35
RFX1-207ENST00000589937 CYP4F3Q08477 520 aa12.88□□□□□ -0.35
RFX1-207ENST00000589937 CA9Q16790 459 aa12.88□□□□□ -0.35
RFX1-207ENST00000589937 ACBD5Q5T8D3 534 aaPredicted RBP12.88□□□□□ -0.35
RFX1-207ENST00000589937 CAVIN1Q6NZI2 390 aaKnown RBP12.88□□□□□ -0.35
RFX1-207ENST00000589937 IRF2BP2Q7Z5L9 587 aa12.88□□□□□ -0.35
RFX1-207ENST00000589937 SLFN11Q7Z7L1 901 aa12.88□□□□□ -0.35
RFX1-207ENST00000589937 IQCHQ86VS3 1027 aa12.88□□□□□ -0.35
RFX1-207ENST00000589937 ZNF354CQ86Y25 554 aa12.88□□□□□ -0.35
RFX1-207ENST00000589937 MCOLN2Q8IZK6 566 aa12.88□□□□□ -0.35
RFX1-207ENST00000589937 SLC25A45Q8N413 288 aa12.88□□□□□ -0.35
RFX1-207ENST00000589937 TSC1Q92574 1164 aa12.88□□□□□ -0.35
RFX1-207ENST00000589937 KLHDC7BQ96G42 594 aa12.88□□□□□ -0.35
RFX1-207ENST00000589937 PPP1R16AQ96I34 528 aa12.88□□□□□ -0.35
RFX1-207ENST00000589937 ERVMER34-1Q9H9K5 563 aa12.88□□□□□ -0.35
RFX1-207ENST00000589937 TPX2Q9ULW0 747 aaKnown RBP12.88□□□□□ -0.35
RFX1-207ENST00000589937 FZD10Q9ULW2 581 aa12.88□□□□□ -0.35
RFX1-207ENST00000589937 DAAM1Q9Y4D1 1078 aa12.88□□□□□ -0.35
RFX1-207ENST00000589937 URB1O60287 2271 aaKnown RBP12.88□□□□□ -0.35
RFX1-207ENST00000589937 SMG1Q96Q15 3661 aaKnown RBP12.87□□□□□ -0.35
RFX1-207ENST00000589937 TRABD2BA6NFA1 517 aa12.87□□□□□ -0.35
RFX1-207ENST00000589937 IGLON5A6NGN9 336 aa12.87□□□□□ -0.35
RFX1-207ENST00000589937 LRRC10BA6NIK2 292 aa12.87□□□□□ -0.35
RFX1-207ENST00000589937 C16orf96A6NNT2 1141 aa12.87□□□□□ -0.35
RFX1-207ENST00000589937 GOLGA6L22H0YM25 854 aa12.87□□□□□ -0.35
RFX1-207ENST00000589937 YKT6O15498 198 aa12.87□□□□□ -0.35
RFX1-207ENST00000589937 SIGLEC6O43699 453 aa12.87□□□□□ -0.35
RFX1-207ENST00000589937 RFPL3O75679 317 aa12.87□□□□□ -0.35
RFX1-207ENST00000589937 PIGNO95427 931 aa12.87□□□□□ -0.35
RFX1-207ENST00000589937 MBD3O95983 291 aa12.87□□□□□ -0.35
RFX1-207ENST00000589937 DGKAP23743 735 aa12.87□□□□□ -0.35
RFX1-207ENST00000589937 NUDT1P36639 197 aa12.87□□□□□ -0.35
RFX1-207ENST00000589937 POLD3Q15054 466 aaPredicted RBP12.87□□□□□ -0.35
RFX1-207ENST00000589937 PROX2Q3B8N5 592 aa12.87□□□□□ -0.35
RFX1-207ENST00000589937 EFHC2Q5JST6 749 aa12.87□□□□□ -0.35
RFX1-207ENST00000589937 HES3Q5TGS1 186 aa12.87□□□□□ -0.35
RFX1-207ENST00000589937 FBXL19Q6PCT2 694 aa12.87□□□□□ -0.35
RFX1-207ENST00000589937 TMC6Q7Z403 805 aa12.87□□□□□ -0.35
RFX1-207ENST00000589937 ABI3BPQ7Z7G0 1075 aa12.87□□□□□ -0.35
RFX1-207ENST00000589937 ARFGAP1Q8N6T3 406 aa12.87□□□□□ -0.35
RFX1-207ENST00000589937 RTL3Q8N8U3 475 aaKnown RBP12.87□□□□□ -0.35
RFX1-207ENST00000589937 OR2AP1Q8NGE2 309 aa12.87□□□□□ -0.35
RFX1-207ENST00000589937 CRELD1Q96HD1 420 aa12.87□□□□□ -0.35
RFX1-207ENST00000589937 CELF6Q96J87 481 aaKnown RBP12.87□□□□□ -0.35
RFX1-207ENST00000589937 BMFQ96LC9 184 aa12.87□□□□□ -0.35
RFX1-207ENST00000589937 MAGEH1Q9H213 219 aa12.87□□□□□ -0.35
RFX1-207ENST00000589937 RTN4Q9NQC3 1192 aaKnown RBP12.87□□□□□ -0.35
RFX1-207ENST00000589937 LHX3Q9UBR4 397 aa12.87□□□□□ -0.35
RFX1-207ENST00000589937 LHX6Q9UPM6 363 aa12.87□□□□□ -0.35
RFX1-207ENST00000589937 GPSM3Q9Y4H4 160 aa12.87□□□□□ -0.35
RFX1-207ENST00000589937 A6NNZ2 444 aa12.86□□□□□ -0.35
RFX1-207ENST00000589937 RASA4BC9J798 803 aa12.86□□□□□ -0.35
RFX1-207ENST00000589937 RASA4O43374 803 aa12.86□□□□□ -0.35
RFX1-207ENST00000589937 BUB1O43683 1085 aa12.86□□□□□ -0.35
RFX1-207ENST00000589937 KDELR3O43731 214 aa12.86□□□□□ -0.35
RFX1-207ENST00000589937 NEBLO76041 1014 aa12.86□□□□□ -0.35
RFX1-207ENST00000589937 PAK4O96013 591 aaPredicted RBP12.86□□□□□ -0.35
RFX1-207ENST00000589937 GSRP00390 522 aa12.86□□□□□ -0.35
RFX1-207ENST00000589937 GIMD1P0DJR0 217 aa12.86□□□□□ -0.35
RFX1-207ENST00000589937 FERP16591 822 aa12.86□□□□□ -0.35
RFX1-207ENST00000589937 OVGP1Q12889 678 aa12.86□□□□□ -0.35
RFX1-207ENST00000589937 FZD2Q14332 565 aa12.86□□□□□ -0.35
RFX1-207ENST00000589937 ACAD10Q6JQN1 1059 aa12.86□□□□□ -0.35
RFX1-207ENST00000589937 NEK5Q6P3R8 708 aa12.86□□□□□ -0.35
RFX1-207ENST00000589937 Q6ZSR6 202 aa12.86□□□□□ -0.35
RFX1-207ENST00000589937 NYAP1Q6ZVC0 841 aa12.86□□□□□ -0.35
RFX1-207ENST00000589937 CYP4V2Q6ZWL3 525 aaPredicted RBP12.86□□□□□ -0.35
RFX1-207ENST00000589937 ZNF571Q7Z3V5 609 aaPredicted RBP12.86□□□□□ -0.35
RFX1-207ENST00000589937 GALNT15Q8N3T1 639 aa12.86□□□□□ -0.35
RFX1-207ENST00000589937 OXR1Q8N573 874 aa12.86□□□□□ -0.35
RFX1-207ENST00000589937 ISG20Q96AZ6 181 aaKnown RBP12.86□□□□□ -0.35
RFX1-207ENST00000589937 KLHL32Q96NJ5 620 aa12.86□□□□□ -0.35
RFX1-207ENST00000589937 NAP1L5Q96NT1 182 aaPredicted RBP12.86□□□□□ -0.35
RFX1-207ENST00000589937 KLF6Q99612 283 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms