RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 METTL3Q86U44 580 aaKnown RBP22.59■■□□□ 1.21
ATG4D-209ENST00000588857 ANKMY2Q8IV38 441 aa22.59■■□□□ 1.21
ATG4D-209ENST00000588857 IPMKQ8NFU5 416 aa22.59■■□□□ 1.21
ATG4D-209ENST00000588857 SUSD6Q92537 303 aa22.59■■□□□ 1.21
ATG4D-209ENST00000588857 FSD1LQ9BXM9 530 aa22.59■■□□□ 1.21
ATG4D-209ENST00000588857 NINJ2Q9NZG7 142 aa22.59■■□□□ 1.21
ATG4D-209ENST00000588857 PRKAG3Q9UGI9 489 aa22.59■■□□□ 1.21
ATG4D-209ENST00000588857 CXorf51AA0A1B0GTR3 108 aa22.58■■□□□ 1.2
ATG4D-209ENST00000588857 AP3B1O00203 1094 aa22.58■■□□□ 1.2
ATG4D-209ENST00000588857 MUSKO15146 869 aa22.58■■□□□ 1.2
ATG4D-209ENST00000588857 USP12O75317 370 aa22.58■■□□□ 1.2
ATG4D-209ENST00000588857 ECI2O75521 394 aa22.58■■□□□ 1.2
ATG4D-209ENST00000588857 ACSL3O95573 720 aa22.58■■□□□ 1.2
ATG4D-209ENST00000588857 CD160O95971 181 aa22.58■■□□□ 1.2
ATG4D-209ENST00000588857 NR1H3Q13133 447 aa22.58■■□□□ 1.2
ATG4D-209ENST00000588857 GRM2Q14416 872 aa22.58■■□□□ 1.2
ATG4D-209ENST00000588857 FUT11Q495W5 492 aa22.58■■□□□ 1.2
ATG4D-209ENST00000588857 CCDC38Q502W7 563 aa22.58■■□□□ 1.2
ATG4D-209ENST00000588857 PRPF39Q86UA1 669 aaKnown RBP22.58■■□□□ 1.2
ATG4D-209ENST00000588857 IQCKQ8N0W5 287 aa22.58■■□□□ 1.2
ATG4D-209ENST00000588857 AHI1Q8N157 1196 aa22.58■■□□□ 1.2
ATG4D-209ENST00000588857 CPA6Q8N4T0 437 aa22.58■■□□□ 1.2
ATG4D-209ENST00000588857 DNAAF3Q8N9W5 541 aa22.58■■□□□ 1.2
ATG4D-209ENST00000588857 ARRDC2Q8TBH0 407 aa22.58■■□□□ 1.2
ATG4D-209ENST00000588857 LRRC39Q96DD0 335 aa22.58■■□□□ 1.2
ATG4D-209ENST00000588857 RUFY1Q96T51 708 aa22.58■■□□□ 1.2
ATG4D-209ENST00000588857 TBL1YQ9BQ87 522 aa22.58■■□□□ 1.2
ATG4D-209ENST00000588857 PLA2G2FQ9BZM2 168 aa22.58■■□□□ 1.2
ATG4D-209ENST00000588857 ECT2Q9H8V3 914 aa22.58■■□□□ 1.2
ATG4D-209ENST00000588857 PLAAQ9Y263 795 aa22.58■■□□□ 1.2
ATG4D-209ENST00000588857 ANKRD36A6QL64 1941 aa22.57■■□□□ 1.2
ATG4D-209ENST00000588857 TCF20Q9UGU0 1960 aaKnown RBP22.57■■□□□ 1.2
ATG4D-209ENST00000588857 CES1P23141 567 aa22.57■■□□□ 1.2
ATG4D-209ENST00000588857 ELK3P41970 407 aa22.57■■□□□ 1.2
ATG4D-209ENST00000588857 MAGEA3P43357 314 aa22.57■■□□□ 1.2
ATG4D-209ENST00000588857 DGKGP49619 791 aa22.57■■□□□ 1.2
ATG4D-209ENST00000588857 SERPINH1P50454 418 aaKnown RBP22.57■■□□□ 1.2
ATG4D-209ENST00000588857 RHOAP61586 193 aa22.57■■□□□ 1.2
ATG4D-209ENST00000588857 FAM193AP78312 1265 aa22.57■■□□□ 1.2
ATG4D-209ENST00000588857 SULT2A1Q06520 285 aa22.57■■□□□ 1.2
ATG4D-209ENST00000588857 SLC29A2Q14542 456 aa22.57■■□□□ 1.2
ATG4D-209ENST00000588857 ALG1LQ6GMV1 187 aa22.57■■□□□ 1.2
ATG4D-209ENST00000588857 FBXO36Q8NEA4 188 aa22.57■■□□□ 1.2
ATG4D-209ENST00000588857 OR52K1Q8NGK4 314 aa22.57■■□□□ 1.2
ATG4D-209ENST00000588857 FGF14Q92915 247 aa22.57■■□□□ 1.2
ATG4D-209ENST00000588857 EPS15L1Q9UBC2 864 aa22.57■■□□□ 1.2
ATG4D-209ENST00000588857 SLC25A13Q9UJS0 675 aa22.57■■□□□ 1.2
ATG4D-209ENST00000588857 FBXO10Q9UK96 956 aa22.57■■□□□ 1.2
ATG4D-209ENST00000588857 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.57■■□□□ 1.2
ATG4D-209ENST00000588857 TTC24A2A3L6 582 aaPredicted RBP22.56■■□□□ 1.2
ATG4D-209ENST00000588857 MT-CO1P00395 513 aa22.56■■□□□ 1.2
ATG4D-209ENST00000588857 CPP00450 1065 aa22.56■■□□□ 1.2
ATG4D-209ENST00000588857 MMP2P08253 660 aa22.56■■□□□ 1.2
ATG4D-209ENST00000588857 SERPINF2P08697 491 aa22.56■■□□□ 1.2
ATG4D-209ENST00000588857 WNT3AP56704 352 aa22.56■■□□□ 1.2
ATG4D-209ENST00000588857 SESN2P58004 480 aaPredicted RBP22.56■■□□□ 1.2
ATG4D-209ENST00000588857 PCSK7Q16549 785 aa22.56■■□□□ 1.2
ATG4D-209ENST00000588857 PALM2Q8IXS6 379 aa22.56■■□□□ 1.2
ATG4D-209ENST00000588857 DDX51Q8N8A6 666 aaKnown RBP eCLIP22.56■■□□□ 1.2
ATG4D-209ENST00000588857 ATP11CQ8NB49 1132 aa22.56■■□□□ 1.2
ATG4D-209ENST00000588857 ZIM3Q96PE6 472 aa22.56■■□□□ 1.2
ATG4D-209ENST00000588857 APOL2Q9BQE5 337 aa22.56■■□□□ 1.2
ATG4D-209ENST00000588857 FICDQ9BVA6 458 aa22.56■■□□□ 1.2
ATG4D-209ENST00000588857 EPB41L4BQ9H329 900 aa22.56■■□□□ 1.2
ATG4D-209ENST00000588857 SCUBE2Q9NQ36 999 aa22.56■■□□□ 1.2
ATG4D-209ENST00000588857 CASS4Q9NQ75 786 aa22.56■■□□□ 1.2
ATG4D-209ENST00000588857 HPS4Q9NQG7 708 aa22.56■■□□□ 1.2
ATG4D-209ENST00000588857 PIH1D1Q9NWS0 290 aaKnown RBP22.56■■□□□ 1.2
ATG4D-209ENST00000588857 CHMP2BQ9UQN3 213 aa22.56■■□□□ 1.2
ATG4D-209ENST00000588857 FCF1Q9Y324 198 aaKnown RBP22.56■■□□□ 1.2
ATG4D-209ENST00000588857 TEX264Q9Y6I9 313 aa22.56■■□□□ 1.2
ATG4D-209ENST00000588857 NCOR1O75376 2440 aa22.56■■□□□ 1.2
ATG4D-209ENST00000588857 SDR42E2A6NKP2 422 aa22.55■■□□□ 1.2
ATG4D-209ENST00000588857 POLR2EP19388 210 aaKnown RBP22.55■■□□□ 1.2
ATG4D-209ENST00000588857 SCNN1BP51168 640 aa22.55■■□□□ 1.2
ATG4D-209ENST00000588857 SKOR1P84550 965 aa22.55■■□□□ 1.2
ATG4D-209ENST00000588857 NSUN2Q08J23 767 aaKnown RBP eCLIP22.55■■□□□ 1.2
ATG4D-209ENST00000588857 CDH17Q12864 832 aa22.55■■□□□ 1.2
ATG4D-209ENST00000588857 OLIG2Q13516 323 aa22.55■■□□□ 1.2
ATG4D-209ENST00000588857 RUNX3Q13761 415 aa22.55■■□□□ 1.2
ATG4D-209ENST00000588857 KDELC1Q6UW63 502 aa22.55■■□□□ 1.2
ATG4D-209ENST00000588857 KIAA0907Q7Z7F0 614 aaPredicted RBP22.55■■□□□ 1.2
ATG4D-209ENST00000588857 ADHFE1Q8IWW8 467 aa22.55■■□□□ 1.2
ATG4D-209ENST00000588857 GJD3Q8N144 294 aa22.55■■□□□ 1.2
ATG4D-209ENST00000588857 EXOC2Q96KP1 924 aa22.55■■□□□ 1.2
ATG4D-209ENST00000588857 TRMT61BQ9BVS5 477 aaKnown RBP22.55■■□□□ 1.2
ATG4D-209ENST00000588857 CD320Q9NPF0 282 aa22.55■■□□□ 1.2
ATG4D-209ENST00000588857 BFARQ9NZS9 450 aa22.55■■□□□ 1.2
ATG4D-209ENST00000588857 MAD1L1Q9Y6D9 718 aa22.55■■□□□ 1.2
ATG4D-209ENST00000588857 INSIG1O15503 277 aa22.55■■□□□ 1.2
ATG4D-209ENST00000588857 TULP3O75386 442 aa22.55■■□□□ 1.2
ATG4D-209ENST00000588857 AGTP01019 485 aa22.55■■□□□ 1.2
ATG4D-209ENST00000588857 SP100P23497 879 aaPredicted RBP22.55■■□□□ 1.2
ATG4D-209ENST00000588857 GDI1P31150 447 aa22.55■■□□□ 1.2
ATG4D-209ENST00000588857 ECT2LQ008S8 904 aa22.55■■□□□ 1.2
ATG4D-209ENST00000588857 ZP2Q05996 745 aa22.55■■□□□ 1.2
ATG4D-209ENST00000588857 IFFO1Q0D2I5 559 aa22.55■■□□□ 1.2
ATG4D-209ENST00000588857 MBLAC2Q68D91 279 aa22.55■■□□□ 1.2
ATG4D-209ENST00000588857 CASC4Q6P4E1 433 aa22.55■■□□□ 1.2
ATG4D-209ENST00000588857 ADIPOR2Q86V24 386 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms