RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 NUP62CLQ9H1M0 184 aa13.95□□□□□ -0.18
HDAC5-208ENST00000588419 NLRC4Q9NPP4 1024 aa13.95□□□□□ -0.18
HDAC5-208ENST00000588419 NDFIP2Q9NV92 336 aa13.95□□□□□ -0.18
HDAC5-208ENST00000588419 EVA1BQ9NVM1 165 aa13.95□□□□□ -0.18
HDAC5-208ENST00000588419 TMEM59LQ9UK28 342 aa13.95□□□□□ -0.18
HDAC5-208ENST00000588419 CPED1A4D0V7 1026 aa13.94□□□□□ -0.18
HDAC5-208ENST00000588419 IGLON5A6NGN9 336 aa13.94□□□□□ -0.18
HDAC5-208ENST00000588419 K7ESM1 405 aa13.94□□□□□ -0.18
HDAC5-208ENST00000588419 OPA1O60313 960 aa13.94□□□□□ -0.18
HDAC5-208ENST00000588419 USP12O75317 370 aa13.94□□□□□ -0.18
HDAC5-208ENST00000588419 CKMT1AP12532 417 aa13.94□□□□□ -0.18
HDAC5-208ENST00000588419 RABIFP47224 123 aa13.94□□□□□ -0.18
HDAC5-208ENST00000588419 FZD2Q14332 565 aa13.94□□□□□ -0.18
HDAC5-208ENST00000588419 POLD3Q15054 466 aaPredicted RBP13.94□□□□□ -0.18
HDAC5-208ENST00000588419 DEFB133Q30KQ1 61 aa13.94□□□□□ -0.18
HDAC5-208ENST00000588419 ATXN7L2Q5T6C5 722 aaPredicted RBP13.94□□□□□ -0.18
HDAC5-208ENST00000588419 IGSF10Q6WRI0 2623 aa13.94□□□□□ -0.18
HDAC5-208ENST00000588419 NETO2Q8NC67 525 aa13.94□□□□□ -0.18
HDAC5-208ENST00000588419 JOSD2Q8TAC2 188 aa13.94□□□□□ -0.18
HDAC5-208ENST00000588419 GPT2Q8TD30 523 aa13.94□□□□□ -0.18
HDAC5-208ENST00000588419 TBC1D31Q96DN5 1066 aa13.94□□□□□ -0.18
HDAC5-208ENST00000588419 BMFQ96LC9 184 aa13.94□□□□□ -0.18
HDAC5-208ENST00000588419 PCMTD1Q96MG8 357 aaPredicted RBP13.94□□□□□ -0.18
HDAC5-208ENST00000588419 NAA15Q9BXJ9 866 aaKnown RBP13.94□□□□□ -0.18
HDAC5-208ENST00000588419 STK33Q9BYT3 514 aa13.94□□□□□ -0.18
HDAC5-208ENST00000588419 VPS16Q9H269 839 aa13.94□□□□□ -0.18
HDAC5-208ENST00000588419 PRORYQ9H606 182 aa13.94□□□□□ -0.18
HDAC5-208ENST00000588419 FAM207AQ9NSI2 230 aaPredicted RBP13.94□□□□□ -0.18
HDAC5-208ENST00000588419 SEPT11Q9NVA2 429 aaKnown RBP13.94□□□□□ -0.18
HDAC5-208ENST00000588419 PPARGC1AQ9UBK2 798 aaKnown RBP13.94□□□□□ -0.18
HDAC5-208ENST00000588419 ZNF212Q9UDV6 495 aa13.94□□□□□ -0.18
HDAC5-208ENST00000588419 OR12D3Q9UGF7 316 aa13.94□□□□□ -0.18
HDAC5-208ENST00000588419 HPCAL4Q9UM19 191 aa13.94□□□□□ -0.18
HDAC5-208ENST00000588419 PTPRQQ9UMZ3 2332 aa13.94□□□□□ -0.18
HDAC5-208ENST00000588419 BPTFQ12830 3046 aa13.93□□□□□ -0.18
HDAC5-208ENST00000588419 C16orf96A6NNT2 1141 aa13.93□□□□□ -0.18
HDAC5-208ENST00000588419 SCAMP1O15126 338 aa13.93□□□□□ -0.18
HDAC5-208ENST00000588419 GIMD1P0DJR0 217 aa13.93□□□□□ -0.18
HDAC5-208ENST00000588419 JUNDP17535 347 aa13.93□□□□□ -0.18
HDAC5-208ENST00000588419 ERCC5P28715 1186 aaPredicted RBP13.93□□□□□ -0.18
HDAC5-208ENST00000588419 ETFBP38117 255 aa13.93□□□□□ -0.18
HDAC5-208ENST00000588419 DUSP3P51452 185 aaPredicted RBP13.93□□□□□ -0.18
HDAC5-208ENST00000588419 PCBP4P57723 403 aaKnown RBP13.93□□□□□ -0.18
HDAC5-208ENST00000588419 POLR2FP61218 127 aaKnown RBP13.93□□□□□ -0.18
HDAC5-208ENST00000588419 SNRPD1P62314 119 aaKnown RBP13.93□□□□□ -0.18
HDAC5-208ENST00000588419 SLC20A2Q08357 652 aa13.93□□□□□ -0.18
HDAC5-208ENST00000588419 TCEA2Q15560 299 aa13.93□□□□□ -0.18
HDAC5-208ENST00000588419 CCDC14Q49A88 953 aa13.93□□□□□ -0.18
HDAC5-208ENST00000588419 TCP11X2Q5H9J9 407 aa13.93□□□□□ -0.18
HDAC5-208ENST00000588419 C3orf38Q5JPI3 329 aa13.93□□□□□ -0.18
HDAC5-208ENST00000588419 TPRG1LQ5T0D9 272 aa13.93□□□□□ -0.18
HDAC5-208ENST00000588419 FOXR1Q6PIV2 292 aa13.93□□□□□ -0.18
HDAC5-208ENST00000588419 EFL1Q7Z2Z2 1120 aaKnown RBP13.93□□□□□ -0.18
HDAC5-208ENST00000588419 VPS36Q86VN1 386 aa13.93□□□□□ -0.18
HDAC5-208ENST00000588419 DCP2Q8IU60 420 aaKnown RBP13.93□□□□□ -0.18
HDAC5-208ENST00000588419 SPACA3Q8IXA5 215 aa13.93□□□□□ -0.18
HDAC5-208ENST00000588419 RBFAQ8N0V3 343 aa13.93□□□□□ -0.18
HDAC5-208ENST00000588419 CCDC185Q8N715 623 aa13.93□□□□□ -0.18
HDAC5-208ENST00000588419 FAM172AQ8WUF8 416 aa13.93□□□□□ -0.18
HDAC5-208ENST00000588419 SLC39A7Q92504 469 aa13.93□□□□□ -0.18
HDAC5-208ENST00000588419 ARHGEF2Q92974 986 aaKnown RBP13.93□□□□□ -0.18
HDAC5-208ENST00000588419 KLHL32Q96NJ5 620 aa13.93□□□□□ -0.18
HDAC5-208ENST00000588419 DUSP23Q9BVJ7 150 aa13.93□□□□□ -0.18
HDAC5-208ENST00000588419 MAGEB5Q9BZ81 275 aa13.93□□□□□ -0.18
HDAC5-208ENST00000588419 WDR70Q9NW82 654 aa13.93□□□□□ -0.18
HDAC5-208ENST00000588419 HS3ST3A1Q9Y663 406 aa13.93□□□□□ -0.18
HDAC5-208ENST00000588419 LY6G6EA0A0G2JKS1 128 aa13.92□□□□□ -0.18
HDAC5-208ENST00000588419 SPTY2D1-AS1A0A0U1RR47 76 aa13.92□□□□□ -0.18
HDAC5-208ENST00000588419 FAM72CH0Y354 149 aa13.92□□□□□ -0.18
HDAC5-208ENST00000588419 AQP9O43315 295 aa13.92□□□□□ -0.18
HDAC5-208ENST00000588419 BUB1O43683 1085 aa13.92□□□□□ -0.18
HDAC5-208ENST00000588419 RAMP2O60895 175 aa13.92□□□□□ -0.18
HDAC5-208ENST00000588419 LRIG2O94898 1065 aa13.92□□□□□ -0.18
HDAC5-208ENST00000588419 ZIC2O95409 532 aaPredicted RBP13.92□□□□□ -0.18
HDAC5-208ENST00000588419 CD160O95971 181 aa13.92□□□□□ -0.18
HDAC5-208ENST00000588419 CSF2P04141 144 aa13.92□□□□□ -0.18
HDAC5-208ENST00000588419 TPM2P07951 284 aa13.92□□□□□ -0.18
HDAC5-208ENST00000588419 NME1P15531 152 aaKnown RBP13.92□□□□□ -0.18
HDAC5-208ENST00000588419 RHOQP17081 205 aa13.92□□□□□ -0.18
HDAC5-208ENST00000588419 ADRA1BP35368 520 aa13.92□□□□□ -0.18
HDAC5-208ENST00000588419 MAPKAPK2P49137 400 aa13.92□□□□□ -0.18
HDAC5-208ENST00000588419 THOP1P52888 689 aa13.92□□□□□ -0.18
HDAC5-208ENST00000588419 GEMIN4P57678 1058 aaKnown RBP13.92□□□□□ -0.18
HDAC5-208ENST00000588419 FMO1Q01740 532 aa13.92□□□□□ -0.18
HDAC5-208ENST00000588419 CDR2Q01850 454 aa13.92□□□□□ -0.18
HDAC5-208ENST00000588419 C1orf61Q13536 156 aa13.92□□□□□ -0.18
HDAC5-208ENST00000588419 ZNF805Q5CZA5 627 aa13.92□□□□□ -0.18
HDAC5-208ENST00000588419 ARTNQ5T4W7 220 aa13.92□□□□□ -0.18
HDAC5-208ENST00000588419 FAM72AQ5TYM5 149 aa13.92□□□□□ -0.18
HDAC5-208ENST00000588419 FAM72DQ6L9T8 149 aa13.92□□□□□ -0.18
HDAC5-208ENST00000588419 ZCCHC8Q6NZY4 707 aaKnown RBP13.92□□□□□ -0.18
HDAC5-208ENST00000588419 GUSBP11Q6P575 273 aa13.92□□□□□ -0.18
HDAC5-208ENST00000588419 GPR155Q7Z3F1 870 aa13.92□□□□□ -0.18
HDAC5-208ENST00000588419 BNIPLQ7Z465 357 aa13.92□□□□□ -0.18
HDAC5-208ENST00000588419 FAM72BQ86X60 149 aa13.92□□□□□ -0.18
HDAC5-208ENST00000588419 ZNF248Q8NDW4 579 aa13.92□□□□□ -0.18
HDAC5-208ENST00000588419 OR2AP1Q8NGE2 309 aa13.92□□□□□ -0.18
HDAC5-208ENST00000588419 FAM174AQ8TBP5 190 aa13.92□□□□□ -0.18
HDAC5-208ENST00000588419 CXorf40AQ8TE69 158 aa13.92□□□□□ -0.18
HDAC5-208ENST00000588419 IFT43Q96FT9 208 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms