RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 STK40Q8N2I9 435 aa9.2□□□□□ -0.94
CIRBP-218ENST00000588344 RASGEF1CQ8N431 466 aa9.2□□□□□ -0.94
CIRBP-218ENST00000588344 RYBPQ8N488 228 aaPredicted RBP9.2□□□□□ -0.94
CIRBP-218ENST00000588344 TSEN2Q8NCE0 465 aaKnown RBP9.2□□□□□ -0.94
CIRBP-218ENST00000588344 ACTL9Q8TC94 416 aa9.2□□□□□ -0.94
CIRBP-218ENST00000588344 ACTRT1Q8TDG2 376 aa9.2□□□□□ -0.94
CIRBP-218ENST00000588344 HMGB4Q8WW32 186 aa9.2□□□□□ -0.94
CIRBP-218ENST00000588344 HTR3CQ8WXA8 447 aa9.2□□□□□ -0.94
CIRBP-218ENST00000588344 SPACA7Q96KW9 195 aa9.2□□□□□ -0.94
CIRBP-218ENST00000588344 HHIPQ96QV1 700 aa9.2□□□□□ -0.94
CIRBP-218ENST00000588344 NUDCD1Q96RS6 583 aa9.2□□□□□ -0.94
CIRBP-218ENST00000588344 OSBPL9Q96SU4 736 aa9.2□□□□□ -0.94
CIRBP-218ENST00000588344 IL12RB2Q99665 862 aa9.2□□□□□ -0.94
CIRBP-218ENST00000588344 MGME1Q9BQP7 344 aa9.2□□□□□ -0.94
CIRBP-218ENST00000588344 MKRN2Q9H000 416 aaKnown RBP9.2□□□□□ -0.94
CIRBP-218ENST00000588344 TNKS2Q9H2K2 1166 aa9.2□□□□□ -0.94
CIRBP-218ENST00000588344 KDM4CQ9H3R0 1056 aa9.2□□□□□ -0.94
CIRBP-218ENST00000588344 SEMA4AQ9H3S1 761 aa9.2□□□□□ -0.94
CIRBP-218ENST00000588344 ATP13A3Q9H7F0 1226 aa9.2□□□□□ -0.94
CIRBP-218ENST00000588344 RBM22Q9NW64 420 aaKnown RBP eCLIP9.2□□□□□ -0.948e-6■□□□□ 10.3
CIRBP-218ENST00000588344 FEZ2Q9UHY8 353 aaPredicted RBP9.2□□□□□ -0.94
CIRBP-218ENST00000588344 FZD4Q9ULV1 537 aa9.2□□□□□ -0.94
CIRBP-218ENST00000588344 TPX2Q9ULW0 747 aaKnown RBP9.2□□□□□ -0.94
CIRBP-218ENST00000588344 ATP8A1Q9Y2Q0 1164 aa9.2□□□□□ -0.94
CIRBP-218ENST00000588344 HCN4Q9Y3Q4 1203 aa9.2□□□□□ -0.94
CIRBP-218ENST00000588344 ARIH1Q9Y4X5 557 aaPredicted RBP9.2□□□□□ -0.94
CIRBP-218ENST00000588344 GOLGA6L10A0A0M3HER8 536 aa9.19□□□□□ -0.94
CIRBP-218ENST00000588344 KRIT1O00522 736 aa9.19□□□□□ -0.94
CIRBP-218ENST00000588344 BNIP3LO60238 219 aa9.19□□□□□ -0.94
CIRBP-218ENST00000588344 JCHAINP01591 159 aa9.19□□□□□ -0.94
CIRBP-218ENST00000588344 IGLV3-19P01714 112 aa9.19□□□□□ -0.94
CIRBP-218ENST00000588344 ATP1A1P05023 1023 aaKnown RBP9.19□□□□□ -0.94
CIRBP-218ENST00000588344 VAV1P15498 845 aa9.19□□□□□ -0.94
CIRBP-218ENST00000588344 PECAM1P16284 738 aaPredicted RBP9.19□□□□□ -0.94
CIRBP-218ENST00000588344 NDUFV2P19404 249 aa9.19□□□□□ -0.94
CIRBP-218ENST00000588344 SERPINA4P29622 427 aa9.19□□□□□ -0.94
CIRBP-218ENST00000588344 CASQ1P31415 396 aa9.19□□□□□ -0.94
CIRBP-218ENST00000588344 CXCR5P32302 372 aa9.19□□□□□ -0.94
CIRBP-218ENST00000588344 PAFAH1B1P43034 410 aa9.19□□□□□ -0.94
CIRBP-218ENST00000588344 NUMBP49757 651 aa9.19□□□□□ -0.94
CIRBP-218ENST00000588344 SCNN1BP51168 640 aa9.19□□□□□ -0.94
CIRBP-218ENST00000588344 BCL2L1Q07817 233 aa9.19□□□□□ -0.94
CIRBP-218ENST00000588344 ITKQ08881 620 aa9.19□□□□□ -0.94
CIRBP-218ENST00000588344 TUBB2AQ13885 445 aa9.19□□□□□ -0.94
CIRBP-218ENST00000588344 ZNF805Q5CZA5 627 aa9.19□□□□□ -0.94
CIRBP-218ENST00000588344 ARSIQ5FYB1 569 aa9.19□□□□□ -0.94
CIRBP-218ENST00000588344 ALG1LQ6GMV1 187 aa9.19□□□□□ -0.94
CIRBP-218ENST00000588344 AADACL2Q6P093 401 aa9.19□□□□□ -0.94
CIRBP-218ENST00000588344 BRAT1Q6PJG6 821 aa9.19□□□□□ -0.94
CIRBP-218ENST00000588344 KIAA1324Q6UXG2 1013 aaKnown RBP9.19□□□□□ -0.94
CIRBP-218ENST00000588344 C4orf22Q6V702 233 aa9.19□□□□□ -0.94
CIRBP-218ENST00000588344 GDPD4Q6W3E5 623 aa9.19□□□□□ -0.94
CIRBP-218ENST00000588344 ZC3H18Q86VM9 953 aaKnown RBP9.19□□□□□ -0.94
CIRBP-218ENST00000588344 ZSCAN30Q86W11 494 aa9.19□□□□□ -0.94
CIRBP-218ENST00000588344 NDUFAF2Q8N183 169 aa9.19□□□□□ -0.94
CIRBP-218ENST00000588344 ZNF366Q8N895 744 aa9.19□□□□□ -0.94
CIRBP-218ENST00000588344 NETO2Q8NC67 525 aa9.19□□□□□ -0.94
CIRBP-218ENST00000588344 ZBTB44Q8NCP5 570 aa9.19□□□□□ -0.94
CIRBP-218ENST00000588344 MDGA1Q8NFP4 955 aa9.19□□□□□ -0.94
CIRBP-218ENST00000588344 PIP4K2CQ8TBX8 421 aa9.19□□□□□ -0.94
CIRBP-218ENST00000588344 RAB7BQ96AH8 199 aa9.19□□□□□ -0.94
CIRBP-218ENST00000588344 LRRC45Q96CN5 670 aa9.19□□□□□ -0.94
CIRBP-218ENST00000588344 TEKT5Q96M29 485 aa9.19□□□□□ -0.94
CIRBP-218ENST00000588344 QKIQ96PU8 341 aaKnown RBP eCLIP9.19□□□□□ -0.94
CIRBP-218ENST00000588344 OMDQ99983 421 aa9.19□□□□□ -0.94
CIRBP-218ENST00000588344 TUBB2BQ9BVA1 445 aa9.19□□□□□ -0.94
CIRBP-218ENST00000588344 HDAC8Q9BY41 377 aa9.19□□□□□ -0.94
CIRBP-218ENST00000588344 TM6SF2Q9BZW4 377 aa9.19□□□□□ -0.94
CIRBP-218ENST00000588344 PCED1AQ9H1Q7 454 aa9.19□□□□□ -0.94
CIRBP-218ENST00000588344 PABPC3Q9H361 631 aaKnown RBP9.19□□□□□ -0.94
CIRBP-218ENST00000588344 SUV39H2Q9H5I1 410 aa9.19□□□□□ -0.94
CIRBP-218ENST00000588344 SGK2Q9HBY8 427 aa9.19□□□□□ -0.94
CIRBP-218ENST00000588344 NT5MQ9NPB1 228 aa9.19□□□□□ -0.94
CIRBP-218ENST00000588344 SCUBE2Q9NQ36 999 aa9.19□□□□□ -0.94
CIRBP-218ENST00000588344 C2orf42Q9NWW7 574 aa9.19□□□□□ -0.94
CIRBP-218ENST00000588344 USP36Q9P275 1121 aaKnown RBP9.19□□□□□ -0.94
CIRBP-218ENST00000588344 SAE1Q9UBE0 346 aaPredicted RBP9.19□□□□□ -0.94
CIRBP-218ENST00000588344 DKK3Q9UBP4 350 aa9.19□□□□□ -0.94
CIRBP-218ENST00000588344 DRG1Q9Y295 367 aaKnown RBP9.19□□□□□ -0.94
CIRBP-218ENST00000588344 C5orf60A6NFR6 353 aa9.18□□□□□ -0.94
CIRBP-218ENST00000588344 KCNK1O00180 336 aa9.18□□□□□ -0.94
CIRBP-218ENST00000588344 PGRMC1O00264 195 aaKnown RBP9.18□□□□□ -0.94
CIRBP-218ENST00000588344 KPNA3O00505 521 aaPredicted RBP9.18□□□□□ -0.94
CIRBP-218ENST00000588344 INSIG1O15503 277 aa9.18□□□□□ -0.94
CIRBP-218ENST00000588344 LIASO43766 372 aa9.18□□□□□ -0.94
CIRBP-218ENST00000588344 SOCS5O75159 536 aa9.18□□□□□ -0.94
CIRBP-218ENST00000588344 LEFTY1O75610 366 aa9.18□□□□□ -0.94
CIRBP-218ENST00000588344 MAP3K6O95382 1288 aa9.18□□□□□ -0.94
CIRBP-218ENST00000588344 ITGAVP06756 1048 aa9.18□□□□□ -0.94
CIRBP-218ENST00000588344 SERPINF2P08697 491 aa9.18□□□□□ -0.94
CIRBP-218ENST00000588344 CR2P20023 1033 aa9.18□□□□□ -0.94
CIRBP-218ENST00000588344 ITGB7P26010 798 aa9.18□□□□□ -0.94
CIRBP-218ENST00000588344 ACTN2P35609 894 aa9.18□□□□□ -0.94
CIRBP-218ENST00000588344 P2RY2P41231 377 aa9.18□□□□□ -0.94
CIRBP-218ENST00000588344 TNNT3P45378 269 aaPredicted RBP9.18□□□□□ -0.94
CIRBP-218ENST00000588344 COL4A3Q01955 1670 aa9.18□□□□□ -0.94
CIRBP-218ENST00000588344 SLC14A2Q15849 920 aa9.18□□□□□ -0.94
CIRBP-218ENST00000588344 CFAP58Q5T655 872 aa9.18□□□□□ -0.94
CIRBP-218ENST00000588344 ITPRIPL1Q6GPH6 555 aa9.18□□□□□ -0.94
CIRBP-218ENST00000588344 NEK5Q6P3R8 708 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms