RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, human

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBD1-208	ENST00000588009	CSTF3	Q12996	717 aa	Known RBP	5.76	□□□□□ -1.49
TUBD1-208	ENST00000588009	PSMD6	Q15008	389 aa		5.76	□□□□□ -1.49
TUBD1-208	ENST00000588009	C1QTNF12	Q5T7M4	302 aa		5.76	□□□□□ -1.49
TUBD1-208	ENST00000588009	VRK3	Q8IV63	474 aa		5.76	□□□□□ -1.49
TUBD1-208	ENST00000588009	C16orf71	Q8IYS4	520 aa	Predicted RBP	5.76	□□□□□ -1.49
TUBD1-208	ENST00000588009	SCML4	Q8N228	414 aa		5.76	□□□□□ -1.49
TUBD1-208	ENST00000588009	FAM47B	Q8NA70	645 aa		5.76	□□□□□ -1.49
TUBD1-208	ENST00000588009	NEU4	Q8WWR8	484 aa	Predicted RBP	5.76	□□□□□ -1.49
TUBD1-208	ENST00000588009	SLC9A6	Q92581	669 aa		5.76	□□□□□ -1.49
TUBD1-208	ENST00000588009	GTF3C6	Q969F1	213 aa		5.76	□□□□□ -1.49
TUBD1-208	ENST00000588009	REPS1	Q96D71	796 aa		5.76	□□□□□ -1.49
TUBD1-208	ENST00000588009	IFT27	Q9BW83	186 aa		5.76	□□□□□ -1.49
TUBD1-208	ENST00000588009	ADGRF5	Q8IZF2	1346 aa		5.75	□□□□□ -1.49
TUBD1-208	ENST00000588009	ENTPD3	O75355	529 aa		5.75	□□□□□ -1.49
TUBD1-208	ENST00000588009	JTB	O76095	146 aa		5.75	□□□□□ -1.49
TUBD1-208	ENST00000588009	SLC2A4	P14672	509 aa		5.75	□□□□□ -1.49
TUBD1-208	ENST00000588009	GABRB2	P47870	512 aa		5.75	□□□□□ -1.49
TUBD1-208	ENST00000588009	PIP4K2A	P48426	406 aa	Predicted RBP	5.75	□□□□□ -1.49
TUBD1-208	ENST00000588009	RARRES1	P49788	294 aa		5.75	□□□□□ -1.49
TUBD1-208	ENST00000588009	MTA1	Q13330	715 aa		5.75	□□□□□ -1.49
TUBD1-208	ENST00000588009	VEPH1	Q14D04	833 aa		5.75	□□□□□ -1.49
TUBD1-208	ENST00000588009	RNPS1	Q15287	305 aa	Known RBP	5.75	□□□□□ -1.49
TUBD1-208	ENST00000588009	ME3	Q16798	604 aa		5.75	□□□□□ -1.49
TUBD1-208	ENST00000588009	LSM12	Q3MHD2	195 aa	Known RBP	5.75	□□□□□ -1.49
TUBD1-208	ENST00000588009	BMP2KL	Q5H9B9	411 aa		5.75	□□□□□ -1.49
TUBD1-208	ENST00000588009	MIIP	Q5JXC2	388 aa		5.75	□□□□□ -1.49
TUBD1-208	ENST00000588009	GKAP1	Q5VSY0	366 aa	Predicted RBP	5.75	□□□□□ -1.49
TUBD1-208	ENST00000588009	TSSK4	Q6SA08	328 aa		5.75	□□□□□ -1.49
TUBD1-208	ENST00000588009	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	5.75	□□□□□ -1.49
TUBD1-208	ENST00000588009	GSTA5	Q7RTV2	222 aa		5.75	□□□□□ -1.49
TUBD1-208	ENST00000588009	GRASP	Q7Z6J2	395 aa	Predicted RBP	5.75	□□□□□ -1.49
TUBD1-208	ENST00000588009	TICAM1	Q8IUC6	712 aa		5.75	□□□□□ -1.49
TUBD1-208	ENST00000588009	AMER2	Q8N7J2	671 aa		5.75	□□□□□ -1.49
TUBD1-208	ENST00000588009	KCTD6	Q8NC69	237 aa		5.75	□□□□□ -1.49
TUBD1-208	ENST00000588009	MMAB	Q96EY8	250 aa	Predicted RBP	5.75	□□□□□ -1.49
TUBD1-208	ENST00000588009	FCRL5	Q96RD9	977 aa		5.75	□□□□□ -1.49
TUBD1-208	ENST00000588009	TM2D2	Q9BX73	214 aa		5.75	□□□□□ -1.49
TUBD1-208	ENST00000588009	IKZF4	Q9H2S9	585 aa		5.75	□□□□□ -1.49
TUBD1-208	ENST00000588009	RRP7BP	Q9NSQ0	103 aa		5.75	□□□□□ -1.49
TUBD1-208	ENST00000588009	MAFF	Q9ULX9	164 aa		5.75	□□□□□ -1.49
TUBD1-208	ENST00000588009	MTMR6	Q9Y217	621 aa		5.75	□□□□□ -1.49
TUBD1-208	ENST00000588009	ZNF711	Q9Y462	761 aa		5.75	□□□□□ -1.49
TUBD1-208	ENST00000588009	MST1R	Q04912	1400 aa		5.74	□□□□□ -1.49
TUBD1-208	ENST00000588009		A0A0A0MQY5	61 aa		5.74	□□□□□ -1.49
TUBD1-208	ENST00000588009	CXorf65	A6NEN9	183 aa		5.74	□□□□□ -1.49
TUBD1-208	ENST00000588009		A8MV72	311 aa	Predicted RBP	5.74	□□□□□ -1.49
TUBD1-208	ENST00000588009	USP17L23	D6RBM5	183 aa		5.74	□□□□□ -1.49
TUBD1-208	ENST00000588009	POC1B-GALNT4	F8VUJ3	575 aa		5.74	□□□□□ -1.49
TUBD1-208	ENST00000588009	MSI1	O43347	362 aa	Known RBP	5.74	□□□□□ -1.49
TUBD1-208	ENST00000588009	RPN1	P04843	607 aa	Known RBP	5.74	□□□□□ -1.49
TUBD1-208	ENST00000588009	PRR35	P0CG20	571 aa		5.74	□□□□□ -1.49
TUBD1-208	ENST00000588009	TNFRSF1A	P19438	455 aa		5.74	□□□□□ -1.49
TUBD1-208	ENST00000588009	SIM1	P81133	766 aa	Predicted RBP	5.74	□□□□□ -1.49
TUBD1-208	ENST00000588009	HIST2H2AC	Q16777	129 aa	Predicted RBP	5.74	□□□□□ -1.49
TUBD1-208	ENST00000588009	TMEM266	Q2M3C6	531 aa		5.74	□□□□□ -1.49
TUBD1-208	ENST00000588009	TSTD2	Q5T7W7	516 aa		5.74	□□□□□ -1.49
TUBD1-208	ENST00000588009	RBM44	Q6ZP01	1051 aa	Known RBP	5.74	□□□□□ -1.49
TUBD1-208	ENST00000588009	HDAC7	Q8WUI4	952 aa		5.74	□□□□□ -1.49
TUBD1-208	ENST00000588009	TMEM170A	Q8WVE7	144 aa		5.74	□□□□□ -1.49
TUBD1-208	ENST00000588009	FAR1	Q8WVX9	515 aa		5.74	□□□□□ -1.49
TUBD1-208	ENST00000588009	PIGK	Q92643	395 aa		5.74	□□□□□ -1.49
TUBD1-208	ENST00000588009	KAT2B	Q92831	832 aa		5.74	□□□□□ -1.49
TUBD1-208	ENST00000588009	PGAM5	Q96HS1	289 aa		5.74	□□□□□ -1.49
TUBD1-208	ENST00000588009	CNDP2	Q96KP4	475 aa	Known RBP	5.74	□□□□□ -1.49
TUBD1-208	ENST00000588009	C1orf74	Q96LT6	269 aa		5.74	□□□□□ -1.49
TUBD1-208	ENST00000588009	TTC14	Q96N46	770 aa		5.74	□□□□□ -1.49
TUBD1-208	ENST00000588009	TEX12	Q9BXU0	123 aa		5.74	□□□□□ -1.49
TUBD1-208	ENST00000588009	MLXIPL	Q9NP71	852 aa		5.74	□□□□□ -1.49
TUBD1-208	ENST00000588009	SH3BP4	Q9P0V3	963 aa		5.74	□□□□□ -1.49
TUBD1-208	ENST00000588009	DLGAP2	Q9P1A6	1054 aa		5.74	□□□□□ -1.49
TUBD1-208	ENST00000588009	CTNNAL1	Q9UBT7	734 aa		5.74	□□□□□ -1.49
TUBD1-208	ENST00000588009	ZHX1	Q9UKY1	873 aa	Predicted RBP	5.74	□□□□□ -1.49
TUBD1-208	ENST00000588009	SESN1	Q9Y6P5	492 aa		5.74	□□□□□ -1.49
TUBD1-208	ENST00000588009	RB1CC1	Q8TDY2	1594 aa		5.73	□□□□□ -1.49
TUBD1-208	ENST00000588009	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	5.73	□□□□□ -1.49
TUBD1-208	ENST00000588009	GRID2IP	A4D2P6	1211 aa		5.73	□□□□□ -1.49
TUBD1-208	ENST00000588009	CBY3	A6NI87	242 aa		5.73	□□□□□ -1.49
TUBD1-208	ENST00000588009	UBE2Q2L	H0YL09	131 aa		5.73	□□□□□ -1.49
TUBD1-208	ENST00000588009	TP73	O15350	636 aa		5.73	□□□□□ -1.49
TUBD1-208	ENST00000588009	ADAM20	O43506	726 aa		5.73	□□□□□ -1.49
TUBD1-208	ENST00000588009	IPO7	O95373	1038 aa	Known RBP	5.73	□□□□□ -1.49
TUBD1-208	ENST00000588009	NFATC1	O95644	943 aa		5.73	□□□□□ -1.49
TUBD1-208	ENST00000588009	RB1	P06400	928 aa		5.73	□□□□□ -1.49
TUBD1-208	ENST00000588009	SELL	P14151	372 aa		5.73	□□□□□ -1.49
TUBD1-208	ENST00000588009	ST6GAL1	P15907	406 aa		5.73	□□□□□ -1.49
TUBD1-208	ENST00000588009	EDN2	P20800	178 aa		5.73	□□□□□ -1.49
TUBD1-208	ENST00000588009	TACR3	P29371	465 aa		5.73	□□□□□ -1.49
TUBD1-208	ENST00000588009	CHRNA5	P30532	468 aa		5.73	□□□□□ -1.49
TUBD1-208	ENST00000588009	CDA	P32320	146 aa		5.73	□□□□□ -1.49
TUBD1-208	ENST00000588009	PLA2G5	P39877	138 aa		5.73	□□□□□ -1.49
TUBD1-208	ENST00000588009	GALNT3	Q14435	633 aa		5.73	□□□□□ -1.49
TUBD1-208	ENST00000588009	PPP2R5B	Q15173	497 aa		5.73	□□□□□ -1.49
TUBD1-208	ENST00000588009	ALG11	Q2TAA5	492 aa		5.73	□□□□□ -1.49
TUBD1-208	ENST00000588009	KIAA1755	Q5JYT7	1200 aa		5.73	□□□□□ -1.49
TUBD1-208	ENST00000588009	GARNL3	Q5VVW2	1013 aa		5.73	□□□□□ -1.49
TUBD1-208	ENST00000588009	TBC1D9B	Q66K14	1250 aa		5.73	□□□□□ -1.49
TUBD1-208	ENST00000588009	CPLX2	Q6PUV4	134 aa	Known RBP	5.73	□□□□□ -1.49
TUBD1-208	ENST00000588009	POC5	Q8NA72	575 aa		5.73	□□□□□ -1.49
TUBD1-208	ENST00000588009	SIL1	Q9H173	461 aa		5.73	□□□□□ -1.49
TUBD1-208	ENST00000588009	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	5.73	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms