RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 ME2P23368 584 aa17.08■□□□□ 0.33
PRKCSH-205ENST00000587327 PMLP29590 882 aa17.08■□□□□ 0.33
PRKCSH-205ENST00000587327 LRPAP1P30533 357 aa17.08■□□□□ 0.33
PRKCSH-205ENST00000587327 DPP6P42658 865 aa17.08■□□□□ 0.33
PRKCSH-205ENST00000587327 ZNF135P52742 658 aaPredicted RBP17.08■□□□□ 0.33
PRKCSH-205ENST00000587327 LSAMPQ13449 338 aa17.08■□□□□ 0.33
PRKCSH-205ENST00000587327 ART3Q13508 389 aa17.08■□□□□ 0.33
PRKCSH-205ENST00000587327 RFTN1Q14699 578 aaPredicted RBP17.08■□□□□ 0.33
PRKCSH-205ENST00000587327 UGP2Q16851 508 aa17.08■□□□□ 0.33
PRKCSH-205ENST00000587327 OTOP3Q7RTS5 596 aa17.08■□□□□ 0.33
PRKCSH-205ENST00000587327 TICAM1Q8IUC6 712 aa17.08■□□□□ 0.33
PRKCSH-205ENST00000587327 SLC41A1Q8IVJ1 513 aa17.08■□□□□ 0.33
PRKCSH-205ENST00000587327 CNTD1Q8N815 330 aa17.08■□□□□ 0.33
PRKCSH-205ENST00000587327 CATSPER1Q8NEC5 780 aa17.08■□□□□ 0.33
PRKCSH-205ENST00000587327 BHLHE22Q8NFJ8 381 aaPredicted RBP17.08■□□□□ 0.33
PRKCSH-205ENST00000587327 PDCD6IPQ8WUM4 868 aaKnown RBP17.08■□□□□ 0.33
PRKCSH-205ENST00000587327 GPR78Q96P69 363 aa17.08■□□□□ 0.33
PRKCSH-205ENST00000587327 UBAP1Q9NZ09 502 aa17.08■□□□□ 0.33
PRKCSH-205ENST00000587327 NUP205Q92621 2012 aa17.08■□□□□ 0.33
PRKCSH-205ENST00000587327 PSMD3O43242 534 aa17.08■□□□□ 0.32
PRKCSH-205ENST00000587327 CACNG3O60359 315 aa17.08■□□□□ 0.32
PRKCSH-205ENST00000587327 BCAS2O75934 225 aaPredicted RBP17.08■□□□□ 0.32
PRKCSH-205ENST00000587327 SMIM18P0DKX4 95 aa17.08■□□□□ 0.32
PRKCSH-205ENST00000587327 IGFBP6P24592 240 aaPredicted RBP17.08■□□□□ 0.32
PRKCSH-205ENST00000587327 HOXC8P31273 242 aa17.08■□□□□ 0.32
PRKCSH-205ENST00000587327 POLD2P49005 469 aa17.08■□□□□ 0.32
PRKCSH-205ENST00000587327 RAB41Q5JT25 222 aa17.08■□□□□ 0.32
PRKCSH-205ENST00000587327 PCID2Q5JVF3 399 aa17.08■□□□□ 0.32
PRKCSH-205ENST00000587327 PKN3Q6P5Z2 889 aa17.08■□□□□ 0.32
PRKCSH-205ENST00000587327 CNTN4Q8IWV2 1026 aa17.08■□□□□ 0.32
PRKCSH-205ENST00000587327 KLHDC8BQ8IXV7 354 aa17.08■□□□□ 0.32
PRKCSH-205ENST00000587327 KDM1BQ8NB78 822 aa17.08■□□□□ 0.32
PRKCSH-205ENST00000587327 SMG8Q8ND04 991 aaKnown RBP17.08■□□□□ 0.32
PRKCSH-205ENST00000587327 ADCY4Q8NFM4 1077 aa17.08■□□□□ 0.32
PRKCSH-205ENST00000587327 USP13Q92995 863 aaPredicted RBP17.08■□□□□ 0.32
PRKCSH-205ENST00000587327 CELF6Q96J87 481 aaKnown RBP17.08■□□□□ 0.32
PRKCSH-205ENST00000587327 TKTL2Q9H0I9 626 aa17.08■□□□□ 0.32
PRKCSH-205ENST00000587327 ETAA1Q9NY74 926 aa17.08■□□□□ 0.32
PRKCSH-205ENST00000587327 RRN3Q9NYV6 651 aa17.08■□□□□ 0.32
PRKCSH-205ENST00000587327 XPR1Q9UBH6 696 aa17.08■□□□□ 0.32
PRKCSH-205ENST00000587327 PGM3O95394 542 aa17.07■□□□□ 0.32
PRKCSH-205ENST00000587327 CRTAMO95727 393 aa17.07■□□□□ 0.32
PRKCSH-205ENST00000587327 IGHA2P01877 340 aa17.07■□□□□ 0.32
PRKCSH-205ENST00000587327 CXCR3P49682 368 aa17.07■□□□□ 0.32
PRKCSH-205ENST00000587327 RAB10P61026 200 aa17.07■□□□□ 0.32
PRKCSH-205ENST00000587327 PDCD2Q16342 344 aaPredicted RBP17.07■□□□□ 0.32
PRKCSH-205ENST00000587327 CEP97Q8IW35 865 aa17.07■□□□□ 0.32
PRKCSH-205ENST00000587327 LILRA2Q8N149 483 aa17.07■□□□□ 0.32
PRKCSH-205ENST00000587327 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.07■□□□□ 0.32
PRKCSH-205ENST00000587327 RNF148Q8N7C7 305 aa17.07■□□□□ 0.32
PRKCSH-205ENST00000587327 ZMIZ2Q8NF64 920 aa17.07■□□□□ 0.32
PRKCSH-205ENST00000587327 DLG3Q92796 817 aa17.07■□□□□ 0.32
PRKCSH-205ENST00000587327 MARK4Q96L34 752 aa17.07■□□□□ 0.32
PRKCSH-205ENST00000587327 COPS7BQ9H9Q2 264 aaPredicted RBP17.07■□□□□ 0.32
PRKCSH-205ENST00000587327 TMEM30AQ9NV96 361 aa17.07■□□□□ 0.32
PRKCSH-205ENST00000587327 AAR2Q9Y312 384 aaKnown RBP17.07■□□□□ 0.32
PRKCSH-205ENST00000587327 COPG1Q9Y678 874 aaKnown RBP17.07■□□□□ 0.32
PRKCSH-205ENST00000587327 C17orf102A2RUQ5 167 aa17.06■□□□□ 0.32
PRKCSH-205ENST00000587327 TCAF2A6NFQ2 919 aa17.06■□□□□ 0.32
PRKCSH-205ENST00000587327 STX16-NPEPL1H3BU86 382 aa17.06■□□□□ 0.32
PRKCSH-205ENST00000587327 PTGESO14684 152 aa17.06■□□□□ 0.32
PRKCSH-205ENST00000587327 PGK1P00558 417 aa17.06■□□□□ 0.32
PRKCSH-205ENST00000587327 CRYBB1P53674 252 aaPredicted RBP17.06■□□□□ 0.32
PRKCSH-205ENST00000587327 ZNF33AQ06730 810 aa17.06■□□□□ 0.32
PRKCSH-205ENST00000587327 CTBP1Q13363 440 aa17.06■□□□□ 0.32
PRKCSH-205ENST00000587327 TSTD2Q5T7W7 516 aa17.06■□□□□ 0.32
PRKCSH-205ENST00000587327 PM20D1Q6GTS8 502 aa17.06■□□□□ 0.32
PRKCSH-205ENST00000587327 CTU1Q7Z7A3 348 aaKnown RBP17.06■□□□□ 0.32
PRKCSH-205ENST00000587327 FAM35AQ86V20 835 aa17.06■□□□□ 0.32
PRKCSH-205ENST00000587327 MFSD6LQ8IWD5 586 aa17.06■□□□□ 0.32
PRKCSH-205ENST00000587327 DENND6AQ8IWF6 608 aa17.06■□□□□ 0.32
PRKCSH-205ENST00000587327 SPATA22Q8NHS9 363 aa17.06■□□□□ 0.32
PRKCSH-205ENST00000587327 EDEM1Q92611 657 aa17.06■□□□□ 0.32
PRKCSH-205ENST00000587327 NXNL1Q96CM4 212 aa17.06■□□□□ 0.32
PRKCSH-205ENST00000587327 DGCR14Q96DF8 476 aaKnown RBP17.06■□□□□ 0.32
PRKCSH-205ENST00000587327 PCED1BQ96HM7 432 aa17.06■□□□□ 0.32
PRKCSH-205ENST00000587327 PRICKLE1Q96MT3 831 aaPredicted RBP17.06■□□□□ 0.32
PRKCSH-205ENST00000587327 AP5M1Q9H0R1 490 aa17.06■□□□□ 0.32
PRKCSH-205ENST00000587327 SHROOM3Q8TF72 1996 aa17.06■□□□□ 0.32
PRKCSH-205ENST00000587327 ACOT8O14734 319 aa17.06■□□□□ 0.32
PRKCSH-205ENST00000587327 OR6B1O95007 311 aa17.06■□□□□ 0.32
PRKCSH-205ENST00000587327 VAPBO95292 243 aa17.06■□□□□ 0.32
PRKCSH-205ENST00000587327 CAPNS1P04632 268 aa17.06■□□□□ 0.32
PRKCSH-205ENST00000587327 STMN1P16949 149 aa17.06■□□□□ 0.32
PRKCSH-205ENST00000587327 RPL5P46777 297 aaKnown RBP17.06■□□□□ 0.32
PRKCSH-205ENST00000587327 SH3BGRP55822 239 aaPredicted RBP17.06■□□□□ 0.32
PRKCSH-205ENST00000587327 PURAQ00577 322 aaKnown RBP17.06■□□□□ 0.32
PRKCSH-205ENST00000587327 BIRC2Q13490 618 aa17.06■□□□□ 0.32
PRKCSH-205ENST00000587327 ZNF460Q14592 562 aa17.06■□□□□ 0.32
PRKCSH-205ENST00000587327 FSCN1Q16658 493 aaKnown RBP17.06■□□□□ 0.32
PRKCSH-205ENST00000587327 DCLRE1AQ6PJP8 1040 aa17.06■□□□□ 0.32
PRKCSH-205ENST00000587327 C17orf99Q6UX52 265 aa17.06■□□□□ 0.32
PRKCSH-205ENST00000587327 CCNYL1Q8N7R7 359 aa17.06■□□□□ 0.32
PRKCSH-205ENST00000587327 MAELQ96JY0 434 aaKnown RBP17.06■□□□□ 0.32
PRKCSH-205ENST00000587327 TSGA13Q96PP4 275 aa17.06■□□□□ 0.32
PRKCSH-205ENST00000587327 NCKIPSDQ9NZQ3 722 aa17.06■□□□□ 0.32
PRKCSH-205ENST00000587327 AP4B1Q9Y6B7 739 aa17.06■□□□□ 0.32
PRKCSH-205ENST00000587327 PRSS51A0A1B0GVH4 220 aa17.05■□□□□ 0.32
PRKCSH-205ENST00000587327 MYBPHLA2RUH7 354 aa17.05■□□□□ 0.32
PRKCSH-205ENST00000587327 TRPC5OSA6NMA1 111 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms