RNA–Protein interactions for RNA: ENST00000586900.1

PKN1-208, Transcript of protein kinase N1, human

TSL 3

Gene PKN1, Length 550 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKN1-208	ENST00000586900	IL1B	P01584	269 aa		12.5	□□□□□ -0.41
PKN1-208	ENST00000586900	ATP1A1	P05023	1023 aa	Known RBP	12.5	□□□□□ -0.41
PKN1-208	ENST00000586900	CTSL	P07711	333 aa		12.5	□□□□□ -0.41
PKN1-208	ENST00000586900	PRLR	P16471	622 aa		12.5	□□□□□ -0.41
PKN1-208	ENST00000586900	CR2	P20023	1033 aa		12.5	□□□□□ -0.41
PKN1-208	ENST00000586900	OXTR	P30559	389 aa		12.5	□□□□□ -0.41
PKN1-208	ENST00000586900	P2RY2	P41231	377 aa		12.5	□□□□□ -0.41
PKN1-208	ENST00000586900	AP1S1	P61966	158 aa		12.5	□□□□□ -0.41
PKN1-208	ENST00000586900	CCDC15	Q0P6D6	951 aa		12.5	□□□□□ -0.41
PKN1-208	ENST00000586900	MAP7D1	Q3KQU3	841 aa		12.5	□□□□□ -0.41
PKN1-208	ENST00000586900	SLC45A4	Q5BKX6	768 aa		12.5	□□□□□ -0.41
PKN1-208	ENST00000586900	ARSI	Q5FYB1	569 aa		12.5	□□□□□ -0.41
PKN1-208	ENST00000586900	HEATR6	Q6AI08	1181 aa	Known RBP	12.5	□□□□□ -0.41
PKN1-208	ENST00000586900	ZC3H14	Q6PJT7	736 aa	Known RBP	12.5	□□□□□ -0.41
PKN1-208	ENST00000586900	KIAA1324	Q6UXG2	1013 aa	Known RBP	12.5	□□□□□ -0.41
PKN1-208	ENST00000586900	SRL	Q86TD4	932 aa		12.5	□□□□□ -0.41
PKN1-208	ENST00000586900	KBTBD6	Q86V97	674 aa		12.5	□□□□□ -0.41
PKN1-208	ENST00000586900	MMAA	Q8IVH4	418 aa	Known RBP	12.5	□□□□□ -0.41
PKN1-208	ENST00000586900	RASGEF1C	Q8N431	466 aa		12.5	□□□□□ -0.41
PKN1-208	ENST00000586900	HCAR2	Q8TDS4	363 aa		12.5	□□□□□ -0.41
PKN1-208	ENST00000586900	FAM131C	Q96AQ9	280 aa		12.5	□□□□□ -0.41
PKN1-208	ENST00000586900	VOPP1	Q96AW1	172 aa		12.5	□□□□□ -0.41
PKN1-208	ENST00000586900	HAUS1	Q96CS2	278 aa		12.5	□□□□□ -0.41
PKN1-208	ENST00000586900	ERLEC1	Q96DZ1	483 aa		12.5	□□□□□ -0.41
PKN1-208	ENST00000586900	QKI	Q96PU8	341 aa	Known RBP eCLIP	12.5	□□□□□ -0.41
PKN1-208	ENST00000586900	NUDCD1	Q96RS6	583 aa		12.5	□□□□□ -0.41
PKN1-208	ENST00000586900	TUBGCP5	Q96RT8	1024 aa		12.5	□□□□□ -0.41
PKN1-208	ENST00000586900	VAT1	Q99536	393 aa		12.5	□□□□□ -0.41
PKN1-208	ENST00000586900	FERMT1	Q9BQL6	677 aa		12.5	□□□□□ -0.41
PKN1-208	ENST00000586900	TPSD1	Q9BZJ3	242 aa		12.5	□□□□□ -0.41
PKN1-208	ENST00000586900	POLR1E	Q9GZS1	481 aa	Known RBP	12.5	□□□□□ -0.41
PKN1-208	ENST00000586900	SLC6A17	Q9H1V8	727 aa		12.5	□□□□□ -0.41
PKN1-208	ENST00000586900	PABPC3	Q9H361	631 aa	Known RBP	12.5	□□□□□ -0.41
PKN1-208	ENST00000586900	RBM22	Q9NW64	420 aa	Known RBP eCLIP	12.5	□□□□□ -0.41
PKN1-208	ENST00000586900	SARDH	Q9UL12	918 aa		12.5	□□□□□ -0.41
PKN1-208	ENST00000586900	TTC7A	Q9ULT0	858 aa	Predicted RBP	12.5	□□□□□ -0.41
PKN1-208	ENST00000586900	NCKAP1	Q9Y2A7	1128 aa		12.5	□□□□□ -0.41
PKN1-208	ENST00000586900	ATP8A1	Q9Y2Q0	1164 aa		12.5	□□□□□ -0.41
PKN1-208	ENST00000586900	MUC6	Q6W4X9	2439 aa		12.5	□□□□□ -0.41
PKN1-208	ENST00000586900	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	12.49	□□□□□ -0.41
PKN1-208	ENST00000586900	BCLAF3	A2AJT9	711 aa	Known RBP	12.49	□□□□□ -0.41
PKN1-208	ENST00000586900		H0Y858	1186 aa		12.49	□□□□□ -0.41
PKN1-208	ENST00000586900	KCNK1	O00180	336 aa		12.49	□□□□□ -0.41
PKN1-208	ENST00000586900	KRIT1	O00522	736 aa		12.49	□□□□□ -0.41
PKN1-208	ENST00000586900	MUSK	O15146	869 aa		12.49	□□□□□ -0.41
PKN1-208	ENST00000586900	MID1	O15344	667 aa		12.49	□□□□□ -0.41
PKN1-208	ENST00000586900	CEP104	O60308	925 aa		12.49	□□□□□ -0.41
PKN1-208	ENST00000586900	LEFTY1	O75610	366 aa		12.49	□□□□□ -0.41
PKN1-208	ENST00000586900	NEBL	O76041	1014 aa		12.49	□□□□□ -0.41
PKN1-208	ENST00000586900	JCHAIN	P01591	159 aa		12.49	□□□□□ -0.41
PKN1-208	ENST00000586900	RBP3	P10745	1247 aa		12.49	□□□□□ -0.41
PKN1-208	ENST00000586900	RGR	P47804	291 aa		12.49	□□□□□ -0.41
PKN1-208	ENST00000586900	PSMD8	P48556	350 aa		12.49	□□□□□ -0.41
PKN1-208	ENST00000586900	TPMT	P51580	245 aa		12.49	□□□□□ -0.41
PKN1-208	ENST00000586900	EIF3E	P60228	445 aa	Known RBP	12.49	□□□□□ -0.41
PKN1-208	ENST00000586900	TEX44	Q53QW1	395 aa		12.49	□□□□□ -0.41
PKN1-208	ENST00000586900	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	12.49	□□□□□ -0.41
PKN1-208	ENST00000586900	PAPD7	Q5XG87	772 aa	Known RBP	12.49	□□□□□ -0.41
PKN1-208	ENST00000586900	ZC3H18	Q86VM9	953 aa	Known RBP	12.49	□□□□□ -0.41
PKN1-208	ENST00000586900	CDKL3	Q8IVW4	592 aa	Predicted RBP	12.49	□□□□□ -0.41
PKN1-208	ENST00000586900	PGBD5	Q8N414	524 aa		12.49	□□□□□ -0.41
PKN1-208	ENST00000586900	RYBP	Q8N488	228 aa	Predicted RBP	12.49	□□□□□ -0.41
PKN1-208	ENST00000586900	SLC35B2	Q8TB61	432 aa		12.49	□□□□□ -0.41
PKN1-208	ENST00000586900	GAB3	Q8WWW8	586 aa		12.49	□□□□□ -0.41
PKN1-208	ENST00000586900	HTR3C	Q8WXA8	447 aa		12.49	□□□□□ -0.41
PKN1-208	ENST00000586900	ZNF419	Q96HQ0	510 aa	Predicted RBP	12.49	□□□□□ -0.41
PKN1-208	ENST00000586900	PPP1R16A	Q96I34	528 aa		12.49	□□□□□ -0.41
PKN1-208	ENST00000586900	SPACA7	Q96KW9	195 aa		12.49	□□□□□ -0.41
PKN1-208	ENST00000586900	ZNF641	Q96N77	438 aa	Predicted RBP	12.49	□□□□□ -0.41
PKN1-208	ENST00000586900	WDR24	Q96S15	920 aa		12.49	□□□□□ -0.41
PKN1-208	ENST00000586900	OSBPL9	Q96SU4	736 aa		12.49	□□□□□ -0.41
PKN1-208	ENST00000586900	NAPG	Q99747	312 aa	Predicted RBP	12.49	□□□□□ -0.41
PKN1-208	ENST00000586900	ZDHHC6	Q9H6R6	413 aa		12.49	□□□□□ -0.41
PKN1-208	ENST00000586900	NT5M	Q9NPB1	228 aa		12.49	□□□□□ -0.41
PKN1-208	ENST00000586900	FBXL12	Q9NXK8	326 aa		12.49	□□□□□ -0.41
PKN1-208	ENST00000586900	EVL	Q9UI08	416 aa	Predicted RBP	12.49	□□□□□ -0.41
PKN1-208	ENST00000586900	FZD4	Q9ULV1	537 aa		12.49	□□□□□ -0.41
PKN1-208	ENST00000586900	SNX12	Q9UMY4	172 aa		12.49	□□□□□ -0.41
PKN1-208	ENST00000586900	IGHV1OR15-9	A0A0B4J2B8	117 aa		12.48	□□□□□ -0.41
PKN1-208	ENST00000586900	TCRBV7S2A1N4T	A0A589	114 aa		12.48	□□□□□ -0.41
PKN1-208	ENST00000586900		H7C0C1	242 aa		12.48	□□□□□ -0.41
PKN1-208	ENST00000586900	KPNA3	O00505	521 aa	Predicted RBP	12.48	□□□□□ -0.41
PKN1-208	ENST00000586900	INSIG1	O15503	277 aa		12.48	□□□□□ -0.41
PKN1-208	ENST00000586900	SLC7A4	O43246	635 aa		12.48	□□□□□ -0.41
PKN1-208	ENST00000586900	RPP40	O75818	363 aa	Known RBP	12.48	□□□□□ -0.41
PKN1-208	ENST00000586900	FGG	P02679	453 aa		12.48	□□□□□ -0.41
PKN1-208	ENST00000586900	TCP1	P17987	556 aa	Known RBP	12.48	□□□□□ -0.41
PKN1-208	ENST00000586900	ITGB7	P26010	798 aa		12.48	□□□□□ -0.41
PKN1-208	ENST00000586900	CXCR5	P32302	372 aa		12.48	□□□□□ -0.41
PKN1-208	ENST00000586900	DRD3	P35462	400 aa		12.48	□□□□□ -0.41
PKN1-208	ENST00000586900	ATP5O	P48047	213 aa		12.48	□□□□□ -0.41
PKN1-208	ENST00000586900	SCNN1B	P51168	640 aa		12.48	□□□□□ -0.41
PKN1-208	ENST00000586900	ETF1	P62495	437 aa	Known RBP	12.48	□□□□□ -0.41
PKN1-208	ENST00000586900	WASHC5	Q12768	1159 aa		12.48	□□□□□ -0.41
PKN1-208	ENST00000586900	ZBTB17	Q13105	803 aa		12.48	□□□□□ -0.41
PKN1-208	ENST00000586900	ZNF805	Q5CZA5	627 aa		12.48	□□□□□ -0.41
PKN1-208	ENST00000586900	SPDYC	Q5MJ68	293 aa		12.48	□□□□□ -0.41
PKN1-208	ENST00000586900	NCEH1	Q6PIU2	408 aa		12.48	□□□□□ -0.41
PKN1-208	ENST00000586900	GDPD4	Q6W3E5	623 aa		12.48	□□□□□ -0.41
PKN1-208	ENST00000586900	SLC36A4	Q6YBV0	504 aa		12.48	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms