RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 PITRM1Q5JRX3 1037 aa12.86□□□□□ -0.35
VMP1-202ENST00000585847 RNASEH2BQ5TBB1 312 aaKnown RBP12.86□□□□□ -0.35
VMP1-202ENST00000585847 PKN3Q6P5Z2 889 aa12.86□□□□□ -0.35
VMP1-202ENST00000585847 NPNTQ6UXI9 565 aa12.86□□□□□ -0.35
VMP1-202ENST00000585847 LRIG3Q6UXM1 1119 aa12.86□□□□□ -0.35
VMP1-202ENST00000585847 CCNJLQ8IV13 435 aa12.86□□□□□ -0.35
VMP1-202ENST00000585847 TTC17Q96AE7 1141 aa12.86□□□□□ -0.35
VMP1-202ENST00000585847 MYO19Q96H55 970 aa12.86□□□□□ -0.35
VMP1-202ENST00000585847 RUFY1Q96T51 708 aa12.86□□□□□ -0.35
VMP1-202ENST00000585847 FEM1AQ9BSK4 669 aa12.86□□□□□ -0.35
VMP1-202ENST00000585847 NAT9Q9BTE0 207 aa12.86□□□□□ -0.35
VMP1-202ENST00000585847 TRIM31Q9BZY9 425 aa12.86□□□□□ -0.35
VMP1-202ENST00000585847 EPC1Q9H2F5 836 aa12.86□□□□□ -0.35
VMP1-202ENST00000585847 MED4Q9NPJ6 270 aa12.86□□□□□ -0.35
VMP1-202ENST00000585847 KIAA1522Q9P206 1035 aaPredicted RBP12.86□□□□□ -0.35
VMP1-202ENST00000585847 SAE1Q9UBE0 346 aaPredicted RBP12.86□□□□□ -0.35
VMP1-202ENST00000585847 AAR2Q9Y312 384 aaKnown RBP12.86□□□□□ -0.35
VMP1-202ENST00000585847 SHROOM3Q8TF72 1996 aa12.85□□□□□ -0.35
VMP1-202ENST00000585847 MAP2K7O14733 419 aa12.85□□□□□ -0.35
VMP1-202ENST00000585847 PI15O43692 258 aa12.85□□□□□ -0.35
VMP1-202ENST00000585847 ZMPSTE24O75844 475 aa12.85□□□□□ -0.35
VMP1-202ENST00000585847 ANXA9O76027 345 aa12.85□□□□□ -0.35
VMP1-202ENST00000585847 CD160O95971 181 aa12.85□□□□□ -0.35
VMP1-202ENST00000585847 APODP05090 189 aa12.85□□□□□ -0.35
VMP1-202ENST00000585847 RHOCP08134 193 aa12.85□□□□□ -0.35
VMP1-202ENST00000585847 ABHD2P08910 425 aa12.85□□□□□ -0.35
VMP1-202ENST00000585847 NUDT17P0C025 328 aa12.85□□□□□ -0.35
VMP1-202ENST00000585847 DRD1P21728 446 aa12.85□□□□□ -0.35
VMP1-202ENST00000585847 CES1P23141 567 aa12.85□□□□□ -0.35
VMP1-202ENST00000585847 GLDCP23378 1020 aa12.85□□□□□ -0.35
VMP1-202ENST00000585847 OR1E1P30953 314 aa12.85□□□□□ -0.35
VMP1-202ENST00000585847 CTSOP43234 321 aaPredicted RBP12.85□□□□□ -0.35
VMP1-202ENST00000585847 ITGA8P53708 1063 aa12.85□□□□□ -0.35
VMP1-202ENST00000585847 AP1B1Q10567 949 aa12.85□□□□□ -0.35
VMP1-202ENST00000585847 SLC10A2Q12908 348 aaPredicted RBP12.85□□□□□ -0.35
VMP1-202ENST00000585847 CDH18Q13634 790 aa12.85□□□□□ -0.35
VMP1-202ENST00000585847 HIF1AQ16665 826 aa12.85□□□□□ -0.35
VMP1-202ENST00000585847 PLEKHG6Q3KR16 790 aa12.85□□□□□ -0.35
VMP1-202ENST00000585847 TEX44Q53QW1 395 aa12.85□□□□□ -0.35
VMP1-202ENST00000585847 RNF219Q5W0B1 726 aaPredicted RBP12.85□□□□□ -0.35
VMP1-202ENST00000585847 MBLAC2Q68D91 279 aa12.85□□□□□ -0.35
VMP1-202ENST00000585847 NAT8LQ8N9F0 302 aa12.85□□□□□ -0.35
VMP1-202ENST00000585847 PJA1Q8NG27 643 aa12.85□□□□□ -0.35
VMP1-202ENST00000585847 SORCS1Q8WY21 1168 aa12.85□□□□□ -0.35
VMP1-202ENST00000585847 MAML1Q92585 1016 aa12.85□□□□□ -0.35
VMP1-202ENST00000585847 ARHGEF2Q92974 986 aaKnown RBP12.85□□□□□ -0.35
VMP1-202ENST00000585847 CLDN23Q96B33 292 aa12.85□□□□□ -0.35
VMP1-202ENST00000585847 SHDQ96IW2 340 aa12.85□□□□□ -0.35
VMP1-202ENST00000585847 MRGPRX3Q96LB0 322 aa12.85□□□□□ -0.35
VMP1-202ENST00000585847 ACE2Q9BYF1 805 aaPredicted RBP12.85□□□□□ -0.35
VMP1-202ENST00000585847 SLC39A8Q9C0K1 460 aa12.85□□□□□ -0.35
VMP1-202ENST00000585847 GBA3Q9H227 469 aa12.85□□□□□ -0.35
VMP1-202ENST00000585847 PABPC3Q9H361 631 aaKnown RBP12.85□□□□□ -0.35
VMP1-202ENST00000585847 RAB6BQ9NRW1 208 aa12.85□□□□□ -0.35
VMP1-202ENST00000585847 VPS45Q9NRW7 570 aa12.85□□□□□ -0.35
VMP1-202ENST00000585847 DLGAP2Q9P1A6 1054 aa12.85□□□□□ -0.35
VMP1-202ENST00000585847 KLHL8Q9P2G9 620 aaPredicted RBP12.85□□□□□ -0.35
VMP1-202ENST00000585847 STARD13Q9Y3M8 1113 aa12.85□□□□□ -0.35
VMP1-202ENST00000585847 ACTL7AQ9Y615 435 aa12.85□□□□□ -0.35
VMP1-202ENST00000585847 CKAP5Q14008 2032 aa12.84□□□□□ -0.35
VMP1-202ENST00000585847 FAM170BA6NMN3 283 aa12.84□□□□□ -0.35
VMP1-202ENST00000585847 E7EVH7 732 aa12.84□□□□□ -0.35
VMP1-202ENST00000585847 STK25O00506 426 aa12.84□□□□□ -0.35
VMP1-202ENST00000585847 SNAP91O60641 907 aa12.84□□□□□ -0.35
VMP1-202ENST00000585847 MAFKO60675 156 aa12.84□□□□□ -0.35
VMP1-202ENST00000585847 NEBLO76041 1014 aa12.84□□□□□ -0.35
VMP1-202ENST00000585847 IVLP07476 585 aa12.84□□□□□ -0.35
VMP1-202ENST00000585847 GSTA2P09210 222 aa12.84□□□□□ -0.35
VMP1-202ENST00000585847 MYBL2P10244 700 aa12.84□□□□□ -0.35
VMP1-202ENST00000585847 TNFRSF4P43489 277 aa12.84□□□□□ -0.35
VMP1-202ENST00000585847 GDF10P55107 478 aa12.84□□□□□ -0.35
VMP1-202ENST00000585847 BASP1P80723 227 aaKnown RBP12.84□□□□□ -0.35
VMP1-202ENST00000585847 GNA12Q03113 381 aa12.84□□□□□ -0.35
VMP1-202ENST00000585847 DHX9Q08211 1270 aaKnown RBP12.84□□□□□ -0.35
VMP1-202ENST00000585847 KCNJ11Q14654 390 aa12.84□□□□□ -0.35
VMP1-202ENST00000585847 UBXN2BQ14CS0 331 aa12.84□□□□□ -0.35
VMP1-202ENST00000585847 POLD3Q15054 466 aaPredicted RBP12.84□□□□□ -0.35
VMP1-202ENST00000585847 PTPRNQ16849 979 aa12.84□□□□□ -0.35
VMP1-202ENST00000585847 HSP90B2PQ58FF3 399 aa12.84□□□□□ -0.35
VMP1-202ENST00000585847 RALGPS1Q5JS13 557 aa12.84□□□□□ -0.35
VMP1-202ENST00000585847 ANKRD20A2Q5SQ80 823 aa12.84□□□□□ -0.35
VMP1-202ENST00000585847 ANKRD20A1Q5TYW2 823 aa12.84□□□□□ -0.35
VMP1-202ENST00000585847 ANKRD20A3Q5VUR7 823 aa12.84□□□□□ -0.35
VMP1-202ENST00000585847 EGFLAMQ63HQ2 1017 aa12.84□□□□□ -0.35
VMP1-202ENST00000585847 ARHGAP36Q6ZRI8 547 aa12.84□□□□□ -0.35
VMP1-202ENST00000585847 Q6ZS52 159 aa12.84□□□□□ -0.35
VMP1-202ENST00000585847 LINC00523Q86TU6 105 aa12.84□□□□□ -0.35
VMP1-202ENST00000585847 KLHDC8BQ8IXV7 354 aa12.84□□□□□ -0.35
VMP1-202ENST00000585847 AHI1Q8N157 1196 aa12.84□□□□□ -0.35
VMP1-202ENST00000585847 WFIKKN2Q8TEU8 576 aa12.84□□□□□ -0.35
VMP1-202ENST00000585847 PRCCQ92733 491 aaPredicted RBP12.84□□□□□ -0.35
VMP1-202ENST00000585847 HMCESQ96FZ2 354 aa12.84□□□□□ -0.35
VMP1-202ENST00000585847 CELF6Q96J87 481 aaKnown RBP12.84□□□□□ -0.35
VMP1-202ENST00000585847 TEKT5Q96M29 485 aa12.84□□□□□ -0.35
VMP1-202ENST00000585847 ACOX2Q99424 681 aa12.84□□□□□ -0.35
VMP1-202ENST00000585847 IL12RB2Q99665 862 aa12.84□□□□□ -0.35
VMP1-202ENST00000585847 FUT8Q9BYC5 575 aa12.84□□□□□ -0.35
VMP1-202ENST00000585847 TXLNGYQ9BZA5 131 aa12.84□□□□□ -0.35
VMP1-202ENST00000585847 OSBPL6Q9BZF3 934 aa12.84□□□□□ -0.35
VMP1-202ENST00000585847 LMAN1LQ9HAT1 526 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms