RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 GOLGA6L7A0A1B0GV03 622 aa10.55□□□□□ -0.72
LIG3-203ENST00000585370 FAM237BA0A1B0GVD1 139 aa10.55□□□□□ -0.72
LIG3-203ENST00000585370 A0A1B0GVM2 712 aa10.55□□□□□ -0.72
LIG3-203ENST00000585370 C2orf78A6NCI8 922 aa10.55□□□□□ -0.72
LIG3-203ENST00000585370 TCAF2A6NFQ2 919 aa10.55□□□□□ -0.72
LIG3-203ENST00000585370 FAM159BA6NKW6 160 aa10.55□□□□□ -0.72
LIG3-203ENST00000585370 PRPF4O43172 522 aaKnown RBP eCLIP10.55□□□□□ -0.72
LIG3-203ENST00000585370 PI15O43692 258 aa10.55□□□□□ -0.72
LIG3-203ENST00000585370 GFRA3O60609 400 aa10.55□□□□□ -0.72
LIG3-203ENST00000585370 PRAMEF11O60813 436 aa10.55□□□□□ -0.72
LIG3-203ENST00000585370 RFPL2O75678 378 aa10.55□□□□□ -0.72
LIG3-203ENST00000585370 KRT38O76015 456 aa10.55□□□□□ -0.72
LIG3-203ENST00000585370 USP1O94782 785 aa10.55□□□□□ -0.72
LIG3-203ENST00000585370 PAPLNO95428 1278 aa10.55□□□□□ -0.72
LIG3-203ENST00000585370 KLKB1P03952 638 aa10.55□□□□□ -0.72
LIG3-203ENST00000585370 SNRPAP09012 282 aaKnown RBP10.55□□□□□ -0.72
LIG3-203ENST00000585370 POU2F2P09086 479 aa10.55□□□□□ -0.72
LIG3-203ENST00000585370 HNRNPA1P09651 372 aaKnown RBP eCLIP10.55□□□□□ -0.72
LIG3-203ENST00000585370 BRAFP15056 766 aa10.55□□□□□ -0.72
LIG3-203ENST00000585370 PTPN2P17706 415 aa10.55□□□□□ -0.72
LIG3-203ENST00000585370 MGAT1P26572 445 aa10.55□□□□□ -0.72
LIG3-203ENST00000585370 GABRR2P28476 465 aa10.55□□□□□ -0.72
LIG3-203ENST00000585370 LSP1P33241 339 aa10.55□□□□□ -0.72
LIG3-203ENST00000585370 CLCN5P51795 746 aa10.55□□□□□ -0.72
LIG3-203ENST00000585370 OXCT1P55809 520 aa10.55□□□□□ -0.72
LIG3-203ENST00000585370 SESN2P58004 480 aaPredicted RBP10.55□□□□□ -0.72
LIG3-203ENST00000585370 GNA12Q03113 381 aa10.55□□□□□ -0.72
LIG3-203ENST00000585370 LAMB3Q13751 1172 aa10.55□□□□□ -0.72
LIG3-203ENST00000585370 TMED2Q15363 201 aa10.55□□□□□ -0.72
LIG3-203ENST00000585370 KBTBD12Q3ZCT8 623 aa10.55□□□□□ -0.72
LIG3-203ENST00000585370 SYCP2LQ5T4T6 812 aa10.55□□□□□ -0.72
LIG3-203ENST00000585370 CWF19L1Q69YN2 538 aaKnown RBP10.55□□□□□ -0.72
LIG3-203ENST00000585370 POTEHQ6S545 545 aa10.55□□□□□ -0.72
LIG3-203ENST00000585370 ARHGAP36Q6ZRI8 547 aa10.55□□□□□ -0.72
LIG3-203ENST00000585370 CAPN12Q6ZSI9 719 aa10.55□□□□□ -0.72
LIG3-203ENST00000585370 TMEM150AQ86TG1 271 aa10.55□□□□□ -0.72
LIG3-203ENST00000585370 CYP4X1Q8N118 509 aa10.55□□□□□ -0.72
LIG3-203ENST00000585370 AGGF1Q8N302 714 aaeCLIP10.55□□□□□ -0.72
LIG3-203ENST00000585370 OR52K1Q8NGK4 314 aa10.55□□□□□ -0.72
LIG3-203ENST00000585370 DCAKDQ8WVC6 231 aa10.55□□□□□ -0.72
LIG3-203ENST00000585370 ZNF707Q96C28 371 aaPredicted RBP10.55□□□□□ -0.72
LIG3-203ENST00000585370 TBL1YQ9BQ87 522 aa10.55□□□□□ -0.72
LIG3-203ENST00000585370 MLPHQ9BV36 600 aaPredicted RBP10.55□□□□□ -0.72
LIG3-203ENST00000585370 LRRC3Q9BY71 257 aa10.55□□□□□ -0.72
LIG3-203ENST00000585370 TRABDQ9H4I3 376 aa10.55□□□□□ -0.72
LIG3-203ENST00000585370 CCDC134Q9H6E4 229 aa10.55□□□□□ -0.72
LIG3-203ENST00000585370 ARNT2Q9HBZ2 717 aa10.55□□□□□ -0.72
LIG3-203ENST00000585370 ZNF334Q9HCZ1 680 aaPredicted RBP10.55□□□□□ -0.72
LIG3-203ENST00000585370 KCNK9Q9NPC2 374 aa10.55□□□□□ -0.72
LIG3-203ENST00000585370 ASAH2Q9NR71 780 aa10.55□□□□□ -0.72
LIG3-203ENST00000585370 GKN1Q9NS71 199 aa10.55□□□□□ -0.72
LIG3-203ENST00000585370 INTS9Q9NV88 658 aaKnown RBP10.55□□□□□ -0.72
LIG3-203ENST00000585370 TBK1Q9UHD2 729 aa10.55□□□□□ -0.72
LIG3-203ENST00000585370 TBC1D30Q9Y2I9 924 aa10.55□□□□□ -0.72
LIG3-203ENST00000585370 TTLL3Q9Y4R7 772 aa10.55□□□□□ -0.72
LIG3-203ENST00000585370 FAM169AQ9Y6X4 670 aa10.55□□□□□ -0.72
LIG3-203ENST00000585370 NUP205Q92621 2012 aa10.55□□□□□ -0.72
LIG3-203ENST00000585370 GVINP1Q7Z2Y8 2422 aa10.54□□□□□ -0.72
LIG3-203ENST00000585370 CXorf51AA0A1B0GTR3 108 aa10.54□□□□□ -0.72
LIG3-203ENST00000585370 GMNCA6NCL1 334 aa10.54□□□□□ -0.72
LIG3-203ENST00000585370 PROB1E7EW31 1015 aa10.54□□□□□ -0.72
LIG3-203ENST00000585370 KDELR3O43731 214 aa10.54□□□□□ -0.72
LIG3-203ENST00000585370 NARSO43776 548 aaKnown RBP10.54□□□□□ -0.72
LIG3-203ENST00000585370 XYLBO75191 536 aa10.54□□□□□ -0.72
LIG3-203ENST00000585370 PEX11BO96011 259 aa10.54□□□□□ -0.72
LIG3-203ENST00000585370 EPOP01588 193 aa10.54□□□□□ -0.72
LIG3-203ENST00000585370 MT-ND3P03897 115 aa10.54□□□□□ -0.72
LIG3-203ENST00000585370 HLA-DQB2P05538 268 aa10.54□□□□□ -0.72
LIG3-203ENST00000585370 CHN1P15882 459 aa10.54□□□□□ -0.72
LIG3-203ENST00000585370 SLC6A4P31645 630 aa10.54□□□□□ -0.72
LIG3-203ENST00000585370 GRIA1P42261 906 aa10.54□□□□□ -0.72
LIG3-203ENST00000585370 EPHA5P54756 1037 aa10.54□□□□□ -0.72
LIG3-203ENST00000585370 GUCY1A3Q02108 690 aa10.54□□□□□ -0.72
LIG3-203ENST00000585370 MGAT5Q09328 741 aa10.54□□□□□ -0.72
LIG3-203ENST00000585370 ILF2Q12905 390 aaKnown RBP10.54□□□□□ -0.72
LIG3-203ENST00000585370 LBRQ14739 615 aaKnown RBP10.54□□□□□ -0.72
LIG3-203ENST00000585370 ARHGAP15Q53QZ3 475 aa10.54□□□□□ -0.72
LIG3-203ENST00000585370 PCID2Q5JVF3 399 aa10.54□□□□□ -0.72
LIG3-203ENST00000585370 MPP7Q5T2T1 576 aa10.54□□□□□ -0.72
LIG3-203ENST00000585370 RANBP10Q6VN20 620 aa10.54□□□□□ -0.72
LIG3-203ENST00000585370 Q6ZNB5 142 aa10.54□□□□□ -0.72
LIG3-203ENST00000585370 HTR3DQ70Z44 454 aa10.54□□□□□ -0.72
LIG3-203ENST00000585370 MARK2Q7KZI7 788 aaKnown RBP10.54□□□□□ -0.72
LIG3-203ENST00000585370 ZNF771Q7L3S4 317 aaPredicted RBP10.54□□□□□ -0.72
LIG3-203ENST00000585370 TMEM135Q86UB9 458 aa10.54□□□□□ -0.72
LIG3-203ENST00000585370 ZNF354CQ86Y25 554 aa10.54□□□□□ -0.72
LIG3-203ENST00000585370 CTAGE3PQ8IX95 158 aa10.54□□□□□ -0.72
LIG3-203ENST00000585370 FAM217AQ8IXS0 508 aa10.54□□□□□ -0.72
LIG3-203ENST00000585370 SRRM1Q8IYB3 904 aaKnown RBP10.54□□□□□ -0.72
LIG3-203ENST00000585370 CPXM2Q8N436 756 aa10.54□□□□□ -0.72
LIG3-203ENST00000585370 PPM1NQ8N819 430 aa10.54□□□□□ -0.72
LIG3-203ENST00000585370 HJURPQ8NCD3 748 aaPredicted RBP10.54□□□□□ -0.72
LIG3-203ENST00000585370 FLCNQ8NFG4 579 aa10.54□□□□□ -0.72
LIG3-203ENST00000585370 GABPB2Q8TAK5 448 aaPredicted RBP10.54□□□□□ -0.72
LIG3-203ENST00000585370 USP33Q8TEY7 942 aa10.54□□□□□ -0.72
LIG3-203ENST00000585370 TMA16Q96EY4 203 aaKnown RBP10.54□□□□□ -0.72
LIG3-203ENST00000585370 IMP4Q96G21 291 aaKnown RBP10.54□□□□□ -0.72
LIG3-203ENST00000585370 DOCK6Q96HP0 2047 aa10.54□□□□□ -0.72
LIG3-203ENST00000585370 OXNAD1Q96HP4 312 aaPredicted RBP10.54□□□□□ -0.72
LIG3-203ENST00000585370 GORASP1Q9BQQ3 440 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms