RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 DENND6AQ8IWF6 608 aa14.38□□□□□ -0.11
CDK5RAP3-237ENST00000585163 CATSPER1Q8NEC5 780 aa14.38□□□□□ -0.11
CDK5RAP3-237ENST00000585163 SPATA22Q8NHS9 363 aa14.38□□□□□ -0.11
CDK5RAP3-237ENST00000585163 NAT14Q8WUY8 206 aa14.38□□□□□ -0.11
CDK5RAP3-237ENST00000585163 EDEM1Q92611 657 aa14.38□□□□□ -0.11
CDK5RAP3-237ENST00000585163 DLG3Q92796 817 aa14.38□□□□□ -0.11
CDK5RAP3-237ENST00000585163 MAELQ96JY0 434 aaKnown RBP14.38□□□□□ -0.11
CDK5RAP3-237ENST00000585163 ZFP42Q96MM3 310 aa14.38□□□□□ -0.11
CDK5RAP3-237ENST00000585163 Q9H521 79 aa14.38□□□□□ -0.11
CDK5RAP3-237ENST00000585163 NDUFA13Q9P0J0 144 aa14.38□□□□□ -0.11
CDK5RAP3-237ENST00000585163 COPG1Q9Y678 874 aaKnown RBP14.38□□□□□ -0.11
CDK5RAP3-237ENST00000585163 HHLA1C9JL84 531 aa14.38□□□□□ -0.11
CDK5RAP3-237ENST00000585163 PDHXO00330 501 aa14.38□□□□□ -0.11
CDK5RAP3-237ENST00000585163 CFLARO15519 480 aa14.38□□□□□ -0.11
CDK5RAP3-237ENST00000585163 DYNC1LI2O43237 492 aaPredicted RBP14.38□□□□□ -0.11
CDK5RAP3-237ENST00000585163 BCAS2O75934 225 aaPredicted RBP14.38□□□□□ -0.11
CDK5RAP3-237ENST00000585163 SMIM18P0DKX4 95 aa14.38□□□□□ -0.11
CDK5RAP3-237ENST00000585163 SRGAP2BP0DMP2 458 aa14.38□□□□□ -0.11
CDK5RAP3-237ENST00000585163 STMN1P16949 149 aa14.38□□□□□ -0.11
CDK5RAP3-237ENST00000585163 ARCN1P48444 511 aaKnown RBP14.38□□□□□ -0.11
CDK5RAP3-237ENST00000585163 LHX1P48742 406 aa14.38□□□□□ -0.11
CDK5RAP3-237ENST00000585163 COG7P83436 770 aa14.38□□□□□ -0.11
CDK5RAP3-237ENST00000585163 CTBP1Q13363 440 aa14.38□□□□□ -0.11
CDK5RAP3-237ENST00000585163 ART3Q13508 389 aa14.38□□□□□ -0.11
CDK5RAP3-237ENST00000585163 GRB14Q14449 540 aa14.38□□□□□ -0.11
CDK5RAP3-237ENST00000585163 ZNF460Q14592 562 aa14.38□□□□□ -0.11
CDK5RAP3-237ENST00000585163 PDCD2Q16342 344 aaPredicted RBP14.38□□□□□ -0.11
CDK5RAP3-237ENST00000585163 TSTD2Q5T7W7 516 aa14.38□□□□□ -0.11
CDK5RAP3-237ENST00000585163 BHLHE22Q8NFJ8 381 aaPredicted RBP14.38□□□□□ -0.11
CDK5RAP3-237ENST00000585163 ADCY4Q8NFM4 1077 aa14.38□□□□□ -0.11
CDK5RAP3-237ENST00000585163 NXNL1Q96CM4 212 aa14.38□□□□□ -0.11
CDK5RAP3-237ENST00000585163 TBL1YQ9BQ87 522 aa14.38□□□□□ -0.11
CDK5RAP3-237ENST00000585163 TSPYL2Q9H2G4 693 aaPredicted RBP14.38□□□□□ -0.11
CDK5RAP3-237ENST00000585163 UBAP1Q9NZ09 502 aa14.38□□□□□ -0.11
CDK5RAP3-237ENST00000585163 FAM95CA0A1B0GW59 222 aa14.37□□□□□ -0.11
CDK5RAP3-237ENST00000585163 ANKRD33BA6NCL7 494 aa14.37□□□□□ -0.11
CDK5RAP3-237ENST00000585163 TCAF2A6NFQ2 919 aa14.37□□□□□ -0.11
CDK5RAP3-237ENST00000585163 NPHS1O60500 1241 aa14.37□□□□□ -0.11
CDK5RAP3-237ENST00000585163 VAPBO95292 243 aa14.37□□□□□ -0.11
CDK5RAP3-237ENST00000585163 CAPNS1P04632 268 aa14.37□□□□□ -0.11
CDK5RAP3-237ENST00000585163 ARNTP27540 789 aa14.37□□□□□ -0.11
CDK5RAP3-237ENST00000585163 PMLP29590 882 aa14.37□□□□□ -0.11
CDK5RAP3-237ENST00000585163 MPP1Q00013 466 aa14.37□□□□□ -0.11
CDK5RAP3-237ENST00000585163 POU6F1Q14863 301 aa14.37□□□□□ -0.11
CDK5RAP3-237ENST00000585163 GPR142Q7Z601 462 aa14.37□□□□□ -0.11
CDK5RAP3-237ENST00000585163 LILRA2Q8N149 483 aa14.37□□□□□ -0.11
CDK5RAP3-237ENST00000585163 TMEM86AQ8N2M4 240 aa14.37□□□□□ -0.11
CDK5RAP3-237ENST00000585163 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.37□□□□□ -0.11
CDK5RAP3-237ENST00000585163 USP33Q8TEY7 942 aa14.37□□□□□ -0.11
CDK5RAP3-237ENST00000585163 USP13Q92995 863 aaPredicted RBP14.37□□□□□ -0.11
CDK5RAP3-237ENST00000585163 MARK4Q96L34 752 aa14.37□□□□□ -0.11
CDK5RAP3-237ENST00000585163 FTHL17Q9BXU8 183 aa14.37□□□□□ -0.11
CDK5RAP3-237ENST00000585163 MRPL46Q9H2W6 279 aaKnown RBP14.37□□□□□ -0.11
CDK5RAP3-237ENST00000585163 CACNG4Q9UBN1 327 aa14.37□□□□□ -0.11
CDK5RAP3-237ENST00000585163 PTCH2Q9Y6C5 1203 aa14.37□□□□□ -0.11
CDK5RAP3-237ENST00000585163 PRSS51A0A1B0GVH4 220 aa14.37□□□□□ -0.11
CDK5RAP3-237ENST00000585163 ACOT8O14734 319 aa14.37□□□□□ -0.11
CDK5RAP3-237ENST00000585163 TREHO43280 583 aa14.37□□□□□ -0.11
CDK5RAP3-237ENST00000585163 CRTAMO95727 393 aa14.37□□□□□ -0.11
CDK5RAP3-237ENST00000585163 MT-CYBP00156 380 aaPredicted RBP14.37□□□□□ -0.11
CDK5RAP3-237ENST00000585163 HSPA1AP0DMV8 641 aaKnown RBP14.37□□□□□ -0.11
CDK5RAP3-237ENST00000585163 HSPA1BP0DMV9 641 aaKnown RBP14.37□□□□□ -0.11
CDK5RAP3-237ENST00000585163 CCNCP24863 283 aa14.37□□□□□ -0.11
CDK5RAP3-237ENST00000585163 LSAMPQ13449 338 aa14.37□□□□□ -0.11
CDK5RAP3-237ENST00000585163 LDLRAD1Q5T700 205 aa14.37□□□□□ -0.11
CDK5RAP3-237ENST00000585163 DENND5AQ6IQ26 1287 aa14.37□□□□□ -0.11
CDK5RAP3-237ENST00000585163 RNF148Q8N7C7 305 aa14.37□□□□□ -0.11
CDK5RAP3-237ENST00000585163 FCRL5Q96RD9 977 aa14.37□□□□□ -0.11
CDK5RAP3-237ENST00000585163 COPS7BQ9H9Q2 264 aaPredicted RBP14.37□□□□□ -0.11
CDK5RAP3-237ENST00000585163 NCKIPSDQ9NZQ3 722 aa14.37□□□□□ -0.11
CDK5RAP3-237ENST00000585163 TRPC5OSA6NMA1 111 aa14.36□□□□□ -0.11
CDK5RAP3-237ENST00000585163 TMEM233B4DJY2 109 aa14.36□□□□□ -0.11
CDK5RAP3-237ENST00000585163 STX16-NPEPL1H3BU86 382 aa14.36□□□□□ -0.11
CDK5RAP3-237ENST00000585163 CRYBB1P53674 252 aaPredicted RBP14.36□□□□□ -0.11
CDK5RAP3-237ENST00000585163 MFSD10Q14728 455 aa14.36□□□□□ -0.11
CDK5RAP3-237ENST00000585163 TWF2Q6IBS0 349 aaKnown RBP14.36□□□□□ -0.11
CDK5RAP3-237ENST00000585163 ESRP1Q6NXG1 681 aaKnown RBP14.36□□□□□ -0.11
CDK5RAP3-237ENST00000585163 ARHGAP36Q6ZRI8 547 aa14.36□□□□□ -0.11
CDK5RAP3-237ENST00000585163 PIWIL4Q7Z3Z4 852 aaKnown RBP14.36□□□□□ -0.11
CDK5RAP3-237ENST00000585163 CCDC117Q8IWD4 279 aaPredicted RBP14.36□□□□□ -0.11
CDK5RAP3-237ENST00000585163 CCNYL1Q8N7R7 359 aa14.36□□□□□ -0.11
CDK5RAP3-237ENST00000585163 ZNF419Q96HQ0 510 aaPredicted RBP14.36□□□□□ -0.11
CDK5RAP3-237ENST00000585163 OMDQ99983 421 aa14.36□□□□□ -0.11
CDK5RAP3-237ENST00000585163 MRPL57Q9BQC6 102 aaKnown RBP14.36□□□□□ -0.11
CDK5RAP3-237ENST00000585163 UBE2OQ9C0C9 1292 aaKnown RBP14.36□□□□□ -0.11
CDK5RAP3-237ENST00000585163 TIMM13Q9Y5L4 95 aaPredicted RBP14.36□□□□□ -0.11
CDK5RAP3-237ENST00000585163 AP4B1Q9Y6B7 739 aa14.36□□□□□ -0.11
CDK5RAP3-237ENST00000585163 SDHDO14521 159 aa14.36□□□□□ -0.11
CDK5RAP3-237ENST00000585163 ANXA9O76027 345 aa14.36□□□□□ -0.11
CDK5RAP3-237ENST00000585163 PGM3O95394 542 aa14.36□□□□□ -0.11
CDK5RAP3-237ENST00000585163 ETS2P15036 469 aa14.36□□□□□ -0.11
CDK5RAP3-237ENST00000585163 CLCN2P51788 898 aa14.36□□□□□ -0.11
CDK5RAP3-237ENST00000585163 SH3BGRP55822 239 aaPredicted RBP14.36□□□□□ -0.11
CDK5RAP3-237ENST00000585163 POTEHQ6S545 545 aa14.36□□□□□ -0.11
CDK5RAP3-237ENST00000585163 TAC4Q86UU9 113 aa14.36□□□□□ -0.11
CDK5RAP3-237ENST00000585163 PELI3Q8N2H9 469 aa14.36□□□□□ -0.11
CDK5RAP3-237ENST00000585163 SPATA6LQ8N4H0 392 aa14.36□□□□□ -0.11
CDK5RAP3-237ENST00000585163 TXNDC5Q8NBS9 432 aaKnown RBP14.36□□□□□ -0.11
CDK5RAP3-237ENST00000585163 IPMKQ8NFU5 416 aa14.36□□□□□ -0.11
CDK5RAP3-237ENST00000585163 CEP70Q8NHQ1 597 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms