RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 PLK4O00444 970 aa16.5■□□□□ 0.23
ERBB2-222ENST00000584908 SLC30A4O14863 429 aa16.5■□□□□ 0.23
ERBB2-222ENST00000584908 BCAT2O15382 392 aaPredicted RBP16.5■□□□□ 0.23
ERBB2-222ENST00000584908 MMRN1Q13201 1228 aa16.5■□□□□ 0.23
ERBB2-222ENST00000584908 RFTN1Q14699 578 aaPredicted RBP16.5■□□□□ 0.23
ERBB2-222ENST00000584908 PAFAH1B3Q15102 231 aaKnown RBP16.5■□□□□ 0.23
ERBB2-222ENST00000584908 NEK5Q6P3R8 708 aa16.5■□□□□ 0.23
ERBB2-222ENST00000584908 RAD9BQ6WBX8 426 aa16.5■□□□□ 0.23
ERBB2-222ENST00000584908 ERN2Q76MJ5 926 aaKnown RBP16.5■□□□□ 0.23
ERBB2-222ENST00000584908 TRIM69Q86WT6 500 aa16.5■□□□□ 0.23
ERBB2-222ENST00000584908 LRRC49Q8IUZ0 686 aa16.5■□□□□ 0.23
ERBB2-222ENST00000584908 TP53INP2Q8IXH6 220 aa16.5■□□□□ 0.23
ERBB2-222ENST00000584908 KCTD6Q8NC69 237 aa16.5■□□□□ 0.23
ERBB2-222ENST00000584908 PCDH19Q8TAB3 1148 aa16.5■□□□□ 0.23
ERBB2-222ENST00000584908 EDEM2Q9BV94 578 aa16.5■□□□□ 0.23
ERBB2-222ENST00000584908 OSBPL1AQ9BXW6 950 aa16.5■□□□□ 0.23
ERBB2-222ENST00000584908 CPEB1Q9BZB8 566 aaKnown RBP16.5■□□□□ 0.23
ERBB2-222ENST00000584908 PREBQ9HCU5 417 aa16.5■□□□□ 0.23
ERBB2-222ENST00000584908 IPO11Q9UI26 975 aaKnown RBP16.5■□□□□ 0.23
ERBB2-222ENST00000584908 REXO2Q9Y3B8 237 aaKnown RBP16.5■□□□□ 0.23
ERBB2-222ENST00000584908 BTNL10A8MVZ5 291 aa16.49■□□□□ 0.23
ERBB2-222ENST00000584908 DFFAO00273 331 aa16.49■□□□□ 0.23
ERBB2-222ENST00000584908 CDX4O14627 284 aaPredicted RBP16.49■□□□□ 0.23
ERBB2-222ENST00000584908 FSBPO95073 299 aa16.49■□□□□ 0.23
ERBB2-222ENST00000584908 IGSF6O95976 241 aa16.49■□□□□ 0.23
ERBB2-222ENST00000584908 PEX11BO96011 259 aa16.49■□□□□ 0.23
ERBB2-222ENST00000584908 CFIP05156 583 aa16.49■□□□□ 0.23
ERBB2-222ENST00000584908 KDELR1P24390 212 aa16.49■□□□□ 0.23
ERBB2-222ENST00000584908 NUDT1P36639 197 aa16.49■□□□□ 0.23
ERBB2-222ENST00000584908 ID4P47928 161 aa16.49■□□□□ 0.23
ERBB2-222ENST00000584908 CSNK1DP48730 415 aa16.49■□□□□ 0.23
ERBB2-222ENST00000584908 RHOAP61586 193 aa16.49■□□□□ 0.23
ERBB2-222ENST00000584908 POM121L1PQ3SYA9 428 aa16.49■□□□□ 0.23
ERBB2-222ENST00000584908 ANKRD20A8PQ5CZ79 823 aa16.49■□□□□ 0.23
ERBB2-222ENST00000584908 ATXN7L2Q5T6C5 722 aaPredicted RBP16.49■□□□□ 0.23
ERBB2-222ENST00000584908 STPG1Q5TH74 334 aa16.49■□□□□ 0.23
ERBB2-222ENST00000584908 ARHGAP36Q6ZRI8 547 aa16.49■□□□□ 0.23
ERBB2-222ENST00000584908 ZCCHC9Q8N567 271 aaKnown RBP16.49■□□□□ 0.23
ERBB2-222ENST00000584908 CALR3Q96L12 384 aaKnown RBP16.49■□□□□ 0.23
ERBB2-222ENST00000584908 BAG1Q99933 345 aaPredicted RBP16.49■□□□□ 0.23
ERBB2-222ENST00000584908 RTKNQ9BST9 563 aa16.49■□□□□ 0.23
ERBB2-222ENST00000584908 CALN1Q9BXU9 219 aa16.49■□□□□ 0.23
ERBB2-222ENST00000584908 ZDHHC6Q9H6R6 413 aa16.49■□□□□ 0.23
ERBB2-222ENST00000584908 EBF2Q9HAK2 575 aa16.49■□□□□ 0.23
ERBB2-222ENST00000584908 DYRK4Q9NR20 520 aa16.49■□□□□ 0.23
ERBB2-222ENST00000584908 CDV3Q9UKY7 258 aaKnown RBP16.49■□□□□ 0.23
ERBB2-222ENST00000584908 SLCO1B1Q9Y6L6 691 aa16.49■□□□□ 0.23
ERBB2-222ENST00000584908 ASCC3Q8N3C0 2202 aaKnown RBP16.49■□□□□ 0.23
ERBB2-222ENST00000584908 TRPM6Q9BX84 2022 aa16.49■□□□□ 0.23
ERBB2-222ENST00000584908 CNOT1A5YKK6 2376 aaKnown RBP16.49■□□□□ 0.23
ERBB2-222ENST00000584908 TBC1D3DA0A087WVF3 549 aa16.48■□□□□ 0.23
ERBB2-222ENST00000584908 TBC1D3IA0A087WXS9 549 aa16.48■□□□□ 0.23
ERBB2-222ENST00000584908 TBC1D3EA0A087X179 549 aa16.48■□□□□ 0.23
ERBB2-222ENST00000584908 TBC1D3KA0A087X1G2 549 aa16.48■□□□□ 0.23
ERBB2-222ENST00000584908 RCCD1A6NED2 376 aa16.48■□□□□ 0.23
ERBB2-222ENST00000584908 TBC1D3FA6NER0 549 aaPredicted RBP16.48■□□□□ 0.23
ERBB2-222ENST00000584908 FAM47DPA6NHR8 397 aa16.48■□□□□ 0.23
ERBB2-222ENST00000584908 C3orf70A6NLC5 250 aaPredicted RBP16.48■□□□□ 0.23
ERBB2-222ENST00000584908 TMEM110-MUSTN1A8MSY1 372 aa16.48■□□□□ 0.23
ERBB2-222ENST00000584908 TBC1D3LB9A6J9 549 aa16.48■□□□□ 0.23
ERBB2-222ENST00000584908 KRIT1O00522 736 aa16.48■□□□□ 0.23
ERBB2-222ENST00000584908 ARHGAP33O14559 1287 aa16.48■□□□□ 0.23
ERBB2-222ENST00000584908 TM4SF5O14894 197 aa16.48■□□□□ 0.23
ERBB2-222ENST00000584908 AP1G1O43747 822 aa16.48■□□□□ 0.23
ERBB2-222ENST00000584908 BUB1BO60566 1050 aaPredicted RBP16.48■□□□□ 0.23
ERBB2-222ENST00000584908 MAFKO60675 156 aa16.48■□□□□ 0.23
ERBB2-222ENST00000584908 TBC1D3HP0C7X1 549 aa16.48■□□□□ 0.23
ERBB2-222ENST00000584908 ENGP17813 658 aa16.48■□□□□ 0.23
ERBB2-222ENST00000584908 GJC1P36383 396 aa16.48■□□□□ 0.23
ERBB2-222ENST00000584908 AFF3P51826 1226 aaKnown RBP16.48■□□□□ 0.23
ERBB2-222ENST00000584908 NEK3P51956 506 aa16.48■□□□□ 0.23
ERBB2-222ENST00000584908 PPP2CBP62714 309 aa16.48■□□□□ 0.23
ERBB2-222ENST00000584908 PPP2CAP67775 309 aa16.48■□□□□ 0.23
ERBB2-222ENST00000584908 RAD51Q06609 339 aa16.48■□□□□ 0.23
ERBB2-222ENST00000584908 NSUN2Q08J23 767 aaKnown RBP eCLIP16.48■□□□□ 0.23
ERBB2-222ENST00000584908 PUM1Q14671 1186 aaKnown RBP eCLIP16.48■□□□□ 0.23
ERBB2-222ENST00000584908 GRM3Q14832 879 aa16.48■□□□□ 0.23
ERBB2-222ENST00000584908 ZNF805Q5CZA5 627 aa16.48■□□□□ 0.23
ERBB2-222ENST00000584908 TMCO4Q5TGY1 634 aa16.48■□□□□ 0.23
ERBB2-222ENST00000584908 NCBP2-AS2Q69YL0 99 aa16.48■□□□□ 0.23
ERBB2-222ENST00000584908 TBC1D3GQ6DHY5 549 aa16.48■□□□□ 0.23
ERBB2-222ENST00000584908 TBC1D3CQ6IPX1 549 aa16.48■□□□□ 0.23
ERBB2-222ENST00000584908 C11orf63Q6NUN7 778 aa16.48■□□□□ 0.23
ERBB2-222ENST00000584908 RHOT1Q8IXI2 618 aa16.48■□□□□ 0.23
ERBB2-222ENST00000584908 TBC1D3Q8IZP1 549 aaPredicted RBP16.48■□□□□ 0.23
ERBB2-222ENST00000584908 PQLC3Q8N755 202 aa16.48■□□□□ 0.23
ERBB2-222ENST00000584908 NETO2Q8NC67 525 aa16.48■□□□□ 0.23
ERBB2-222ENST00000584908 SNX19Q92543 992 aa16.48■□□□□ 0.23
ERBB2-222ENST00000584908 RAPGEF5Q92565 580 aa16.48■□□□□ 0.23
ERBB2-222ENST00000584908 PSKH2Q96QS6 385 aa16.48■□□□□ 0.23
ERBB2-222ENST00000584908 ZDHHC5Q9C0B5 715 aa16.48■□□□□ 0.23
ERBB2-222ENST00000584908 SP110Q9HB58 689 aa16.48■□□□□ 0.23
ERBB2-222ENST00000584908 TM9SF3Q9HD45 589 aa16.48■□□□□ 0.23
ERBB2-222ENST00000584908 DKK3Q9UBP4 350 aa16.48■□□□□ 0.23
ERBB2-222ENST00000584908 PJA2O43164 708 aa16.47■□□□□ 0.23
ERBB2-222ENST00000584908 PALMO75781 387 aa16.47■□□□□ 0.23
ERBB2-222ENST00000584908 IPO7O95373 1038 aaKnown RBP16.47■□□□□ 0.23
ERBB2-222ENST00000584908 SYPP08247 313 aa16.47■□□□□ 0.23
ERBB2-222ENST00000584908 ADRB3P13945 408 aa16.47■□□□□ 0.23
ERBB2-222ENST00000584908 COMTP21964 271 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms