RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 Q8N9G6 341 aaPredicted RBP11.33□□□□□ -0.6
CASC3-208ENST00000583649 KYQ8NBH2 561 aa11.33□□□□□ -0.6
CASC3-208ENST00000583649 GALNT11Q8NCW6 608 aa11.33□□□□□ -0.6
CASC3-208ENST00000583649 PCDH19Q8TAB3 1148 aa11.33□□□□□ -0.6
CASC3-208ENST00000583649 MED15Q96RN5 788 aa11.33□□□□□ -0.6
CASC3-208ENST00000583649 C1QTNF2Q9BXJ5 285 aa11.33□□□□□ -0.6
CASC3-208ENST00000583649 EDEM3Q9BZQ6 932 aa11.33□□□□□ -0.6
CASC3-208ENST00000583649 KCTD10Q9H3F6 313 aa11.33□□□□□ -0.6
CASC3-208ENST00000583649 ZSCAN16Q9H4T2 348 aaPredicted RBP11.33□□□□□ -0.6
CASC3-208ENST00000583649 FOXD4L1Q9NU39 408 aa11.33□□□□□ -0.6
CASC3-208ENST00000583649 RNF215Q9Y6U7 377 aa11.33□□□□□ -0.6
CASC3-208ENST00000583649 NYNRINQ9P2P1 1898 aaKnown RBP11.33□□□□□ -0.6
CASC3-208ENST00000583649 TEP1Q99973 2627 aaKnown RBP11.33□□□□□ -0.6
CASC3-208ENST00000583649 RELNP78509 3460 aa11.33□□□□□ -0.6
CASC3-208ENST00000583649 IGLON5A6NGN9 336 aa11.32□□□□□ -0.6
CASC3-208ENST00000583649 MKRN2OSH3BPM6 223 aa11.32□□□□□ -0.6
CASC3-208ENST00000583649 PIK3R2O00459 728 aa11.32□□□□□ -0.6
CASC3-208ENST00000583649 RAD51BO15315 384 aa11.32□□□□□ -0.6
CASC3-208ENST00000583649 POLR2DO15514 142 aaKnown RBP11.32□□□□□ -0.6
CASC3-208ENST00000583649 SPINT1O43278 529 aa11.32□□□□□ -0.6
CASC3-208ENST00000583649 KRT38O76015 456 aa11.32□□□□□ -0.6
CASC3-208ENST00000583649 PAEPP09466 180 aa11.32□□□□□ -0.6
CASC3-208ENST00000583649 LIFP15018 202 aa11.32□□□□□ -0.6
CASC3-208ENST00000583649 TNFRSF8P28908 595 aa11.32□□□□□ -0.6
CASC3-208ENST00000583649 EIF4A3P38919 411 aaKnown RBP11.32□□□□□ -0.6
CASC3-208ENST00000583649 PEX5P50542 639 aa11.32□□□□□ -0.6
CASC3-208ENST00000583649 HK3P52790 923 aa11.32□□□□□ -0.6
CASC3-208ENST00000583649 SLC20A2Q08357 652 aa11.32□□□□□ -0.6
CASC3-208ENST00000583649 BIRC2Q13490 618 aa11.32□□□□□ -0.6
CASC3-208ENST00000583649 CUL2Q13617 745 aa11.32□□□□□ -0.6
CASC3-208ENST00000583649 NAA30Q147X3 362 aaPredicted RBP11.32□□□□□ -0.6
CASC3-208ENST00000583649 CNGA2Q16280 664 aa11.32□□□□□ -0.6
CASC3-208ENST00000583649 C1orf220Q5T0J3 134 aa11.32□□□□□ -0.6
CASC3-208ENST00000583649 RETSATQ6NUM9 610 aa11.32□□□□□ -0.6
CASC3-208ENST00000583649 PMF1Q6P1K2 205 aa11.32□□□□□ -0.6
CASC3-208ENST00000583649 TAC4Q86UU9 113 aa11.32□□□□□ -0.6
CASC3-208ENST00000583649 SLC45A3Q96JT2 553 aa11.32□□□□□ -0.6
CASC3-208ENST00000583649 KLF6Q99612 283 aaPredicted RBP11.32□□□□□ -0.6
CASC3-208ENST00000583649 HEPHQ9BQS7 1158 aa11.32□□□□□ -0.6
CASC3-208ENST00000583649 CEP44Q9C0F1 390 aa11.32□□□□□ -0.6
CASC3-208ENST00000583649 FAM204AQ9H8W3 233 aa11.32□□□□□ -0.6
CASC3-208ENST00000583649 GPN2Q9H9Y4 310 aaPredicted RBP11.32□□□□□ -0.6
CASC3-208ENST00000583649 POPDC2Q9HBU9 364 aa11.32□□□□□ -0.6
CASC3-208ENST00000583649 ST7Q9NRC1 585 aa11.32□□□□□ -0.6
CASC3-208ENST00000583649 TRAF3IP3Q9Y228 551 aa11.32□□□□□ -0.6
CASC3-208ENST00000583649 PCDHGA3Q9Y5H0 932 aa11.32□□□□□ -0.6
CASC3-208ENST00000583649 TTLL8A6PVC2 850 aa11.31□□□□□ -0.6
CASC3-208ENST00000583649 AGRPO00253 132 aa11.31□□□□□ -0.6
CASC3-208ENST00000583649 CUTAO60888 179 aa11.31□□□□□ -0.6
CASC3-208ENST00000583649 TM7SF2O76062 418 aa11.31□□□□□ -0.6
CASC3-208ENST00000583649 CPNE6O95741 557 aa11.31□□□□□ -0.6
CASC3-208ENST00000583649 TRUB2O95900 331 aaKnown RBP11.31□□□□□ -0.6
CASC3-208ENST00000583649 RHOCP08134 193 aa11.31□□□□□ -0.6
CASC3-208ENST00000583649 ETV5P41161 510 aa11.31□□□□□ -0.6
CASC3-208ENST00000583649 DNA2P51530 1060 aa11.31□□□□□ -0.6
CASC3-208ENST00000583649 CDH4P55283 916 aa11.31□□□□□ -0.6
CASC3-208ENST00000583649 RAB15P59190 212 aa11.31□□□□□ -0.6
CASC3-208ENST00000583649 CDK17Q00537 523 aa11.31□□□□□ -0.6
CASC3-208ENST00000583649 STK4Q13043 487 aa11.31□□□□□ -0.6
CASC3-208ENST00000583649 CUL4BQ13620 913 aa11.31□□□□□ -0.6
CASC3-208ENST00000583649 NFIL3Q16649 462 aa11.31□□□□□ -0.6
CASC3-208ENST00000583649 DCAF12Q5T6F0 453 aa11.31□□□□□ -0.6
CASC3-208ENST00000583649 MAMDC2Q7Z304 686 aaPredicted RBP11.31□□□□□ -0.6
CASC3-208ENST00000583649 CIR1Q86X95 450 aaPredicted RBP11.31□□□□□ -0.6
CASC3-208ENST00000583649 HID1Q8IV36 788 aa11.31□□□□□ -0.6
CASC3-208ENST00000583649 ALG14Q96F25 216 aa11.31□□□□□ -0.6
CASC3-208ENST00000583649 USP28Q96RU2 1077 aa11.31□□□□□ -0.6
CASC3-208ENST00000583649 DDA1Q9BW61 102 aa11.31□□□□□ -0.6
CASC3-208ENST00000583649 CLPBQ9H078 707 aa11.31□□□□□ -0.6
CASC3-208ENST00000583649 TCEAL2Q9H3H9 227 aaPredicted RBP11.31□□□□□ -0.6
CASC3-208ENST00000583649 CAAP1Q9H8G2 361 aa11.31□□□□□ -0.6
CASC3-208ENST00000583649 LRIT1Q9P2V4 623 aa11.31□□□□□ -0.6
CASC3-208ENST00000583649 XPO7Q9UIA9 1087 aaKnown RBP11.31□□□□□ -0.6
CASC3-208ENST00000583649 RABGEF1Q9UJ41 708 aa11.31□□□□□ -0.6
CASC3-208ENST00000583649 TBC1D30Q9Y2I9 924 aa11.31□□□□□ -0.6
CASC3-208ENST00000583649 KCTD3Q9Y597 815 aa11.31□□□□□ -0.6
CASC3-208ENST00000583649 PCDHB3Q9Y5E6 796 aa11.31□□□□□ -0.6
CASC3-208ENST00000583649 COL27A1Q8IZC6 1860 aaPredicted RBP11.31□□□□□ -0.6
CASC3-208ENST00000583649 KIF26BQ2KJY2 2108 aa11.3□□□□□ -0.6
CASC3-208ENST00000583649 NUDT21O43809 227 aaKnown RBP11.3□□□□□ -0.6
CASC3-208ENST00000583649 RHOBTB3O94955 611 aa11.3□□□□□ -0.6
CASC3-208ENST00000583649 TNFP01375 233 aa11.3□□□□□ -0.6
CASC3-208ENST00000583649 MYL1P05976 194 aa11.3□□□□□ -0.6
CASC3-208ENST00000583649 PRKAR1AP10644 381 aa11.3□□□□□ -0.6
CASC3-208ENST00000583649 EPB41P11171 864 aaKnown RBP11.3□□□□□ -0.6
CASC3-208ENST00000583649 MAP4P27816 1152 aaKnown RBP11.3□□□□□ -0.6
CASC3-208ENST00000583649 CSTF2P33240 577 aaKnown RBP eCLIP11.3□□□□□ -0.6
CASC3-208ENST00000583649 UGT1A3P35503 534 aa11.3□□□□□ -0.6
CASC3-208ENST00000583649 NASPP49321 788 aaPredicted RBP11.3□□□□□ -0.6
CASC3-208ENST00000583649 MLLT10P55197 1068 aa11.3□□□□□ -0.6
CASC3-208ENST00000583649 YWHAZP63104 245 aaKnown RBP11.3□□□□□ -0.6
CASC3-208ENST00000583649 CDC20Q12834 499 aa11.3□□□□□ -0.6
CASC3-208ENST00000583649 ADAM9Q13443 819 aa11.3□□□□□ -0.6
CASC3-208ENST00000583649 TRA2AQ13595 282 aaKnown RBP eCLIP11.3□□□□□ -0.62e-8■□□□□ 11.1
CASC3-208ENST00000583649 AUHQ13825 339 aaKnown RBP11.3□□□□□ -0.6
CASC3-208ENST00000583649 CERCAMQ5T4B2 595 aa11.3□□□□□ -0.6
CASC3-208ENST00000583649 ACBD5Q5T8D3 534 aaPredicted RBP11.3□□□□□ -0.6
CASC3-208ENST00000583649 CAPRIN2Q6IMN6 1127 aaKnown RBP11.3□□□□□ -0.6
CASC3-208ENST00000583649 FBXL22Q6P050 247 aa11.3□□□□□ -0.6
CASC3-208ENST00000583649 C22orf39Q6P5X5 142 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms