RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 DNAJC28Q9NX36 388 aa10.8□□□□□ -0.68
RFFL-209ENST00000581265 GTF3C3Q9Y5Q9 886 aa10.8□□□□□ -0.68
RFFL-209ENST00000581265 FHOD1Q9Y613 1164 aa10.8□□□□□ -0.68
RFFL-209ENST00000581265 CSNK1G3Q9Y6M4 447 aa10.8□□□□□ -0.68
RFFL-209ENST00000581265 U3KQA8 63 aa10.8□□□□□ -0.68
RFFL-209ENST00000581265 DOCK4Q8N1I0 1966 aa10.79□□□□□ -0.68
RFFL-209ENST00000581265 GOLGA8SH3BPF8 625 aa10.79□□□□□ -0.68
RFFL-209ENST00000581265 RIOK3O14730 519 aaKnown RBP10.79□□□□□ -0.68
RFFL-209ENST00000581265 RAD51BO15315 384 aa10.79□□□□□ -0.68
RFFL-209ENST00000581265 DXOO77932 396 aaKnown RBP10.79□□□□□ -0.68
RFFL-209ENST00000581265 NME1P15531 152 aaKnown RBP10.79□□□□□ -0.68
RFFL-209ENST00000581265 ADRA1BP35368 520 aa10.79□□□□□ -0.68
RFFL-209ENST00000581265 ETFBP38117 255 aa10.79□□□□□ -0.68
RFFL-209ENST00000581265 RABIFP47224 123 aa10.79□□□□□ -0.68
RFFL-209ENST00000581265 LSSP48449 732 aa10.79□□□□□ -0.68
RFFL-209ENST00000581265 CSRP3P50461 194 aa10.79□□□□□ -0.68
RFFL-209ENST00000581265 DNA2P51530 1060 aa10.79□□□□□ -0.68
RFFL-209ENST00000581265 CCNHP51946 323 aaPredicted RBP10.79□□□□□ -0.68
RFFL-209ENST00000581265 NOMO3P69849 1222 aa10.79□□□□□ -0.68
RFFL-209ENST00000581265 SRSF1Q07955 248 aaKnown RBP eCLIP10.79□□□□□ -0.68
RFFL-209ENST00000581265 SGCGQ13326 291 aa10.79□□□□□ -0.68
RFFL-209ENST00000581265 MAPK8IP2Q13387 824 aaPredicted RBP10.79□□□□□ -0.68
RFFL-209ENST00000581265 LY6DQ14210 128 aa10.79□□□□□ -0.68
RFFL-209ENST00000581265 ZNF542PQ5EBM4 170 aa10.79□□□□□ -0.68
RFFL-209ENST00000581265 TAF3Q5VWG9 929 aa10.79□□□□□ -0.68
RFFL-209ENST00000581265 PCSK4Q6UW60 755 aa10.79□□□□□ -0.68
RFFL-209ENST00000581265 KYAT3Q6YP21 454 aaKnown RBP10.79□□□□□ -0.68
RFFL-209ENST00000581265 SPACA3Q8IXA5 215 aa10.79□□□□□ -0.68
RFFL-209ENST00000581265 DRC7Q8IY82 874 aa10.79□□□□□ -0.68
RFFL-209ENST00000581265 MSANTD4Q8NCY6 345 aa10.79□□□□□ -0.68
RFFL-209ENST00000581265 EPS8L1Q8TE68 723 aa10.79□□□□□ -0.68
RFFL-209ENST00000581265 CPA5Q8WXQ8 436 aa10.79□□□□□ -0.68
RFFL-209ENST00000581265 RAB7BQ96AH8 199 aa10.79□□□□□ -0.68
RFFL-209ENST00000581265 VOPP1Q96AW1 172 aa10.79□□□□□ -0.68
RFFL-209ENST00000581265 HIC2Q96JB3 615 aa10.79□□□□□ -0.68
RFFL-209ENST00000581265 CFAP57Q96MR6 1250 aa10.79□□□□□ -0.68
RFFL-209ENST00000581265 ZNF578Q96N58 590 aaPredicted RBP10.79□□□□□ -0.68
RFFL-209ENST00000581265 DEPDC7Q96QD5 511 aa10.79□□□□□ -0.68
RFFL-209ENST00000581265 OSBPL2Q9H1P3 480 aa10.79□□□□□ -0.68
RFFL-209ENST00000581265 CAAP1Q9H8G2 361 aa10.79□□□□□ -0.68
RFFL-209ENST00000581265 EVA1BQ9NVM1 165 aa10.79□□□□□ -0.68
RFFL-209ENST00000581265 HECAQ9UBI9 543 aaPredicted RBP10.79□□□□□ -0.68
RFFL-209ENST00000581265 OR12D3Q9UGF7 316 aa10.79□□□□□ -0.68
RFFL-209ENST00000581265 PCDHB1Q9Y5F3 818 aa10.79□□□□□ -0.68
RFFL-209ENST00000581265 HEMK1Q9Y5R4 338 aaPredicted RBP10.79□□□□□ -0.68
RFFL-209ENST00000581265 HECTD1Q9ULT8 2610 aa10.78□□□□□ -0.68
RFFL-209ENST00000581265 IGLON5A6NGN9 336 aa10.78□□□□□ -0.68
RFFL-209ENST00000581265 C16orf96A6NNT2 1141 aa10.78□□□□□ -0.68
RFFL-209ENST00000581265 F8VZ95 297 aa10.78□□□□□ -0.68
RFFL-209ENST00000581265 FPGTO14772 594 aa10.78□□□□□ -0.68
RFFL-209ENST00000581265 TPP1O14773 563 aa10.78□□□□□ -0.68
RFFL-209ENST00000581265 LZTS3O60299 673 aaPredicted RBP10.78□□□□□ -0.68
RFFL-209ENST00000581265 NEBLO76041 1014 aa10.78□□□□□ -0.68
RFFL-209ENST00000581265 POP4O95707 220 aaKnown RBP10.78□□□□□ -0.68
RFFL-209ENST00000581265 CYP1A1P04798 512 aaPredicted RBP10.78□□□□□ -0.68
RFFL-209ENST00000581265 MMEP08473 750 aa10.78□□□□□ -0.68
RFFL-209ENST00000581265 RHOQP17081 205 aa10.78□□□□□ -0.68
RFFL-209ENST00000581265 MMP8P22894 467 aa10.78□□□□□ -0.68
RFFL-209ENST00000581265 ACVRL1P37023 503 aa10.78□□□□□ -0.68
RFFL-209ENST00000581265 MAPKAPK2P49137 400 aa10.78□□□□□ -0.68
RFFL-209ENST00000581265 UCNP55089 124 aa10.78□□□□□ -0.68
RFFL-209ENST00000581265 GEMIN4P57678 1058 aaKnown RBP10.78□□□□□ -0.68
RFFL-209ENST00000581265 TMPRSS3P57727 454 aa10.78□□□□□ -0.68
RFFL-209ENST00000581265 ERVPABLB-1P60509 514 aa10.78□□□□□ -0.68
RFFL-209ENST00000581265 PFN3P60673 137 aa10.78□□□□□ -0.68
RFFL-209ENST00000581265 ATP11AP98196 1134 aa10.78□□□□□ -0.68
RFFL-209ENST00000581265 DPCR1Q3MIW9 517 aa10.78□□□□□ -0.68
RFFL-209ENST00000581265 ARL13BQ3SXY8 428 aa10.78□□□□□ -0.68
RFFL-209ENST00000581265 ZNF805Q5CZA5 627 aa10.78□□□□□ -0.68
RFFL-209ENST00000581265 ARHGAP40Q5TG30 622 aa10.78□□□□□ -0.68
RFFL-209ENST00000581265 MANEALQ5VSG8 457 aa10.78□□□□□ -0.68
RFFL-209ENST00000581265 ZCCHC8Q6NZY4 707 aaKnown RBP10.78□□□□□ -0.68
RFFL-209ENST00000581265 PARS2Q7L3T8 475 aaKnown RBP10.78□□□□□ -0.68
RFFL-209ENST00000581265 PTAR1Q7Z6K3 402 aaPredicted RBP10.78□□□□□ -0.68
RFFL-209ENST00000581265 NLRP14Q86W24 1093 aa10.78□□□□□ -0.68
RFFL-209ENST00000581265 PARGQ86W56 976 aa10.78□□□□□ -0.68
RFFL-209ENST00000581265 ZNF677Q86XU0 584 aa10.78□□□□□ -0.68
RFFL-209ENST00000581265 EMC1Q8N766 993 aa10.78□□□□□ -0.68
RFFL-209ENST00000581265 ZNF248Q8NDW4 579 aa10.78□□□□□ -0.68
RFFL-209ENST00000581265 ZNF548Q8NEK5 533 aaPredicted RBP10.78□□□□□ -0.68
RFFL-209ENST00000581265 ARHGEF2Q92974 986 aaKnown RBP10.78□□□□□ -0.68
RFFL-209ENST00000581265 GRAMD1AQ96CP6 724 aa10.78□□□□□ -0.68
RFFL-209ENST00000581265 NAF1Q96HR8 494 aaKnown RBP10.78□□□□□ -0.68
RFFL-209ENST00000581265 ABCG4Q9H172 646 aa10.78□□□□□ -0.68
RFFL-209ENST00000581265 MAGEH1Q9H213 219 aa10.78□□□□□ -0.68
RFFL-209ENST00000581265 NDFIP2Q9NV92 336 aa10.78□□□□□ -0.68
RFFL-209ENST00000581265 NCKIPSDQ9NZQ3 722 aa10.78□□□□□ -0.68
RFFL-209ENST00000581265 IPO11Q9UI26 975 aaKnown RBP10.78□□□□□ -0.68
RFFL-209ENST00000581265 KLF15Q9UIH9 416 aa10.78□□□□□ -0.68
RFFL-209ENST00000581265 SALL4Q9UJQ4 1053 aa10.78□□□□□ -0.68
RFFL-209ENST00000581265 FCF1Q9Y324 198 aaKnown RBP10.78□□□□□ -0.68
RFFL-209ENST00000581265 ACTL7AQ9Y615 435 aa10.78□□□□□ -0.68
RFFL-209ENST00000581265 MYO18BQ8IUG5 2567 aa10.78□□□□□ -0.68
RFFL-209ENST00000581265 FAM72CH0Y354 149 aa10.77□□□□□ -0.69
RFFL-209ENST00000581265 H3BM21 787 aa10.77□□□□□ -0.69
RFFL-209ENST00000581265 AREL1O15033 823 aa10.77□□□□□ -0.69
RFFL-209ENST00000581265 SPINT1O43278 529 aa10.77□□□□□ -0.69
RFFL-209ENST00000581265 USP12O75317 370 aa10.77□□□□□ -0.69
RFFL-209ENST00000581265 CSO75390 466 aaKnown RBP10.77□□□□□ -0.69
RFFL-209ENST00000581265 GSRP00390 522 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms