RNA–Protein interactions for RNA: ENST00000581224.5

TRIM16-222, Transcript of tripartite motif containing 16, human

TSL 3

Gene TRIM16, Length 815 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM16-222	ENST00000581224	OTOP3	Q7RTS5	596 aa		10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	TMCO2	Q7Z6W1	182 aa	Predicted RBP	10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	PIGW	Q7Z7B1	504 aa		10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	PRPF39	Q86UA1	669 aa	Known RBP	10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	KCNMB4	Q86W47	210 aa		10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	FAM217A	Q8IXS0	508 aa		10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	AGGF1	Q8N302	714 aa	eCLIP	10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	MPP5	Q8N3R9	675 aa		10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	MGARP	Q8TDB4	240 aa		10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	USP33	Q8TEY7	942 aa		10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	ACD	Q96AP0	544 aa		10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	TIFA	Q96CG3	184 aa		10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	PAIP2	Q9BPZ3	127 aa	Known RBP	10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	TCF25	Q9BQ70	676 aa		10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	FICD	Q9BVA6	458 aa		10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	CINP	Q9BW66	212 aa	Predicted RBP	10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	ADGRE3	Q9BY15	652 aa		10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	ACE2	Q9BYF1	805 aa	Predicted RBP	10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	PITPNM3	Q9BZ71	974 aa		10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	TRPC7	Q9HCX4	862 aa		10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	ATP13A1	Q9HD20	1204 aa		10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	TLR9	Q9NR96	1032 aa		10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	C20orf96	Q9NUD7	363 aa	Predicted RBP	10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	NDFIP2	Q9NV92	336 aa		10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	ANKRD6	Q9Y2G4	727 aa		10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	STARD13	Q9Y3M8	1113 aa		10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	TCAF1	Q9Y4C2	921 aa		10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224	OBSL1	O75147	1896 aa		10.06	□□□□□ -0.8
TRIM16-222	ENST00000581224		A0A1W2PPM1	405 aa		10.05	□□□□□ -0.8
TRIM16-222	ENST00000581224	E2F8	A0AVK6	867 aa		10.05	□□□□□ -0.8
TRIM16-222	ENST00000581224	TCP11X1	B4DZS4	312 aa		10.05	□□□□□ -0.8
TRIM16-222	ENST00000581224		J3KR12	359 aa		10.05	□□□□□ -0.8
TRIM16-222	ENST00000581224	KLF11	O14901	512 aa		10.05	□□□□□ -0.8
TRIM16-222	ENST00000581224	SPAG7	O75391	227 aa		10.05	□□□□□ -0.8
TRIM16-222	ENST00000581224	LUC7L3	O95232	432 aa	Known RBP	10.05	□□□□□ -0.8
TRIM16-222	ENST00000581224	CRTAM	O95727	393 aa		10.05	□□□□□ -0.8
TRIM16-222	ENST00000581224	IL1B	P01584	269 aa		10.05	□□□□□ -0.8
TRIM16-222	ENST00000581224	CKM	P06732	381 aa		10.05	□□□□□ -0.8
TRIM16-222	ENST00000581224	TROVE2	P10155	538 aa	Known RBP eCLIP	10.05	□□□□□ -0.8
TRIM16-222	ENST00000581224	PYGB	P11216	843 aa		10.05	□□□□□ -0.8
TRIM16-222	ENST00000581224	COL6A2	P12110	1019 aa		10.05	□□□□□ -0.8
TRIM16-222	ENST00000581224	MYOG	P15173	224 aa		10.05	□□□□□ -0.8
TRIM16-222	ENST00000581224	TYK2	P29597	1187 aa		10.05	□□□□□ -0.8
TRIM16-222	ENST00000581224	KPNA2	P52292	529 aa	Known RBP	10.05	□□□□□ -0.8
TRIM16-222	ENST00000581224	SLC10A7	Q0GE19	358 aa		10.05	□□□□□ -0.8
TRIM16-222	ENST00000581224	RAB30	Q15771	203 aa		10.05	□□□□□ -0.8
TRIM16-222	ENST00000581224	CCDC153	Q494R4	210 aa		10.05	□□□□□ -0.8
TRIM16-222	ENST00000581224	CERCAM	Q5T4B2	595 aa		10.05	□□□□□ -0.8
TRIM16-222	ENST00000581224	LVRN	Q6Q4G3	990 aa		10.05	□□□□□ -0.8
TRIM16-222	ENST00000581224	KDELC1	Q6UW63	502 aa		10.05	□□□□□ -0.8
TRIM16-222	ENST00000581224	ARHGAP36	Q6ZRI8	547 aa		10.05	□□□□□ -0.8
TRIM16-222	ENST00000581224	GALNT7	Q86SF2	657 aa		10.05	□□□□□ -0.8
TRIM16-222	ENST00000581224	C4orf33	Q8N1A6	199 aa		10.05	□□□□□ -0.8
TRIM16-222	ENST00000581224	DEFB123	Q8N688	67 aa		10.05	□□□□□ -0.8
TRIM16-222	ENST00000581224	ZNF398	Q8TD17	642 aa		10.05	□□□□□ -0.8
TRIM16-222	ENST00000581224	TCP10L	Q8TDR4	215 aa		10.05	□□□□□ -0.8
TRIM16-222	ENST00000581224	MICAL1	Q8TDZ2	1067 aa		10.05	□□□□□ -0.8
TRIM16-222	ENST00000581224	SPOCK2	Q92563	424 aa		10.05	□□□□□ -0.8
TRIM16-222	ENST00000581224	TADA1	Q96BN2	335 aa		10.05	□□□□□ -0.8
TRIM16-222	ENST00000581224	OTUB2	Q96DC9	234 aa		10.05	□□□□□ -0.8
TRIM16-222	ENST00000581224	SEC16B	Q96JE7	1060 aa		10.05	□□□□□ -0.8
TRIM16-222	ENST00000581224	MRGPRX2	Q96LB1	330 aa		10.05	□□□□□ -0.8
TRIM16-222	ENST00000581224	RBBP8	Q99708	897 aa		10.05	□□□□□ -0.8
TRIM16-222	ENST00000581224	C19orf43	Q9BQ61	176 aa		10.05	□□□□□ -0.8
TRIM16-222	ENST00000581224	GORASP1	Q9BQQ3	440 aa		10.05	□□□□□ -0.8
TRIM16-222	ENST00000581224	SPON2	Q9BUD6	331 aa		10.05	□□□□□ -0.8
TRIM16-222	ENST00000581224	C2orf49	Q9BVC5	232 aa	Predicted RBP	10.05	□□□□□ -0.8
TRIM16-222	ENST00000581224	PBX4	Q9BYU1	374 aa		10.05	□□□□□ -0.8
TRIM16-222	ENST00000581224	RNF38	Q9H0F5	515 aa		10.05	□□□□□ -0.8
TRIM16-222	ENST00000581224	MUC3B	Q9H195	1237 aa		10.05	□□□□□ -0.8
TRIM16-222	ENST00000581224	ATXN3L	Q9H3M9	355 aa		10.05	□□□□□ -0.8
TRIM16-222	ENST00000581224	IL21	Q9HBE4	155 aa		10.05	□□□□□ -0.8
TRIM16-222	ENST00000581224	HACD3	Q9P035	362 aa		10.05	□□□□□ -0.8
TRIM16-222	ENST00000581224	TBC1D14	Q9P2M4	693 aa		10.05	□□□□□ -0.8
TRIM16-222	ENST00000581224	CORO1C	Q9ULV4	474 aa	Predicted RBP	10.05	□□□□□ -0.8
TRIM16-222	ENST00000581224	PLLP	Q9Y342	182 aa		10.05	□□□□□ -0.8
TRIM16-222	ENST00000581224	SZT2	Q5T011	3432 aa		10.05	□□□□□ -0.8
TRIM16-222	ENST00000581224	ZCWPW2	A0A1B0GU75	182 aa		10.04	□□□□□ -0.8
TRIM16-222	ENST00000581224	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	10.04	□□□□□ -0.8
TRIM16-222	ENST00000581224	LOC285095	A0A1B0GVY8	99 aa		10.04	□□□□□ -0.8
TRIM16-222	ENST00000581224	C2orf78	A6NCI8	922 aa		10.04	□□□□□ -0.8
TRIM16-222	ENST00000581224	C2orf71	A6NGG8	1288 aa		10.04	□□□□□ -0.8
TRIM16-222	ENST00000581224	SLC9A3R1	O14745	358 aa	Predicted RBP	10.04	□□□□□ -0.8
TRIM16-222	ENST00000581224	SLC7A4	O43246	635 aa		10.04	□□□□□ -0.8
TRIM16-222	ENST00000581224	SIN3B	O75182	1162 aa		10.04	□□□□□ -0.8
TRIM16-222	ENST00000581224	USP12	O75317	370 aa		10.04	□□□□□ -0.8
TRIM16-222	ENST00000581224	RFPL1	O75677	317 aa		10.04	□□□□□ -0.8
TRIM16-222	ENST00000581224	NDST3	O95803	873 aa		10.04	□□□□□ -0.8
TRIM16-222	ENST00000581224	KLKB1	P03952	638 aa		10.04	□□□□□ -0.8
TRIM16-222	ENST00000581224	ITGA2B	P08514	1039 aa		10.04	□□□□□ -0.8
TRIM16-222	ENST00000581224	SLC6A4	P31645	630 aa		10.04	□□□□□ -0.8
TRIM16-222	ENST00000581224	AVPR1A	P37288	418 aa		10.04	□□□□□ -0.8
TRIM16-222	ENST00000581224	CD86	P42081	329 aa		10.04	□□□□□ -0.8
TRIM16-222	ENST00000581224	LIMK2	P53671	638 aa		10.04	□□□□□ -0.8
TRIM16-222	ENST00000581224	PRKAA2	P54646	552 aa		10.04	□□□□□ -0.8
TRIM16-222	ENST00000581224	EPHA5	P54756	1037 aa		10.04	□□□□□ -0.8
TRIM16-222	ENST00000581224	HNRNPH2	P55795	449 aa	Known RBP	10.04	□□□□□ -0.8
TRIM16-222	ENST00000581224	CDK18	Q07002	472 aa		10.04	□□□□□ -0.8
TRIM16-222	ENST00000581224	ASPH	Q12797	758 aa		10.04	□□□□□ -0.8
TRIM16-222	ENST00000581224	MTM1	Q13496	603 aa		10.04	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms