RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 TRAV19A0A0A6YYK7 116 aa20.54■□□□□ 0.88
SMG8-203ENST00000578922 TBL1XO60907 577 aa20.54■□□□□ 0.88
SMG8-203ENST00000578922 YBEYP58557 167 aaPredicted RBP20.54■□□□□ 0.88
SMG8-203ENST00000578922 NTHL1P78549 312 aa20.54■□□□□ 0.88
SMG8-203ENST00000578922 ZNF177Q13360 481 aaPredicted RBP20.54■□□□□ 0.88
SMG8-203ENST00000578922 HNRNPDQ14103 355 aaKnown RBP20.54■□□□□ 0.88
SMG8-203ENST00000578922 TRMT10BQ6PF06 316 aaKnown RBP20.54■□□□□ 0.88
SMG8-203ENST00000578922 C4orf33Q8N1A6 199 aa20.54■□□□□ 0.88
SMG8-203ENST00000578922 SHKBP1Q8TBC3 707 aa20.54■□□□□ 0.88
SMG8-203ENST00000578922 NSMCE1Q8WV22 266 aa20.54■□□□□ 0.88
SMG8-203ENST00000578922 ARNTL2Q8WYA1 636 aa20.54■□□□□ 0.88
SMG8-203ENST00000578922 FCRL5Q96RD9 977 aa20.54■□□□□ 0.88
SMG8-203ENST00000578922 CYTH2Q99418 400 aa20.54■□□□□ 0.88
SMG8-203ENST00000578922 LRRC40Q9H9A6 602 aa20.54■□□□□ 0.88
SMG8-203ENST00000578922 DNMT3BQ9UBC3 853 aaKnown RBP20.54■□□□□ 0.88
SMG8-203ENST00000578922 MTCL1Q9Y4B5 1905 aaKnown RBP20.54■□□□□ 0.88
SMG8-203ENST00000578922 TM9SF1O15321 606 aa20.53■□□□□ 0.88
SMG8-203ENST00000578922 CLDN11O75508 207 aa20.53■□□□□ 0.88
SMG8-203ENST00000578922 RHOCP08134 193 aa20.53■□□□□ 0.88
SMG8-203ENST00000578922 GLDCP23378 1020 aa20.53■□□□□ 0.88
SMG8-203ENST00000578922 CBLBQ13191 982 aa20.53■□□□□ 0.88
SMG8-203ENST00000578922 SLC1A5Q15758 541 aa20.53■□□□□ 0.88
SMG8-203ENST00000578922 PCSK7Q16549 785 aa20.53■□□□□ 0.88
SMG8-203ENST00000578922 CERCAMQ5T4B2 595 aa20.53■□□□□ 0.88
SMG8-203ENST00000578922 GPR158Q5T848 1215 aa20.53■□□□□ 0.88
SMG8-203ENST00000578922 ADGRD2Q7Z7M1 963 aa20.53■□□□□ 0.88
SMG8-203ENST00000578922 CTAGE3PQ8IX95 158 aa20.53■□□□□ 0.88
SMG8-203ENST00000578922 UNC5BQ8IZJ1 945 aa20.53■□□□□ 0.88
SMG8-203ENST00000578922 CARNMT1Q8N4J0 409 aa20.53■□□□□ 0.88
SMG8-203ENST00000578922 ERP27Q96DN0 273 aa20.53■□□□□ 0.88
SMG8-203ENST00000578922 DDX50Q9BQ39 737 aaKnown RBP20.53■□□□□ 0.88
SMG8-203ENST00000578922 KIF9Q9HAQ2 790 aa20.53■□□□□ 0.88
SMG8-203ENST00000578922 CHKBQ9Y259 395 aa20.53■□□□□ 0.88
SMG8-203ENST00000578922 STK38LQ9Y2H1 464 aa20.53■□□□□ 0.88
SMG8-203ENST00000578922 ERI2A8K979 691 aaKnown RBP20.53■□□□□ 0.88
SMG8-203ENST00000578922 ATP9BO43861 1147 aa20.53■□□□□ 0.88
SMG8-203ENST00000578922 CACNG3O60359 315 aa20.53■□□□□ 0.88
SMG8-203ENST00000578922 IL10RBQ08334 325 aa20.53■□□□□ 0.88
SMG8-203ENST00000578922 TEAD2Q15562 447 aa20.53■□□□□ 0.88
SMG8-203ENST00000578922 ZNF75CPQ92670 426 aaPredicted RBP20.53■□□□□ 0.88
SMG8-203ENST00000578922 ANKRD27Q96NW4 1050 aa20.53■□□□□ 0.88
SMG8-203ENST00000578922 FICDQ9BVA6 458 aa20.53■□□□□ 0.88
SMG8-203ENST00000578922 CASS4Q9NQ75 786 aa20.53■□□□□ 0.88
SMG8-203ENST00000578922 GRID1Q9ULK0 1009 aa20.53■□□□□ 0.88
SMG8-203ENST00000578922 CCL26Q9Y258 94 aa20.53■□□□□ 0.88
SMG8-203ENST00000578922 AAR2Q9Y312 384 aaKnown RBP20.53■□□□□ 0.88
SMG8-203ENST00000578922 SH3BP1Q9Y3L3 701 aa20.53■□□□□ 0.88
SMG8-203ENST00000578922 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.52■□□□□ 0.88
SMG8-203ENST00000578922 A0A1B0GVM2 712 aa20.52■□□□□ 0.88
SMG8-203ENST00000578922 TCAF2A6NFQ2 919 aa20.52■□□□□ 0.88
SMG8-203ENST00000578922 CCDC85CA6NKD9 419 aa20.52■□□□□ 0.88
SMG8-203ENST00000578922 CXorf49A8MYA2 514 aaPredicted RBP20.52■□□□□ 0.88
SMG8-203ENST00000578922 HNRNPCL1O60812 293 aaKnown RBP20.52■□□□□ 0.88
SMG8-203ENST00000578922 PRAMEF11O60813 436 aa20.52■□□□□ 0.88
SMG8-203ENST00000578922 SPAG6O75602 509 aa20.52■□□□□ 0.88
SMG8-203ENST00000578922 GJB3O75712 270 aa20.52■□□□□ 0.88
SMG8-203ENST00000578922 RHOP08100 348 aa20.52■□□□□ 0.88
SMG8-203ENST00000578922 KRT4P19013 534 aa20.52■□□□□ 0.88
SMG8-203ENST00000578922 DSC2Q02487 901 aa20.52■□□□□ 0.88
SMG8-203ENST00000578922 SLC5A9Q2M3M2 681 aa20.52■□□□□ 0.88
SMG8-203ENST00000578922 FYB2Q5VWT5 728 aa20.52■□□□□ 0.88
SMG8-203ENST00000578922 LVRNQ6Q4G3 990 aa20.52■□□□□ 0.88
SMG8-203ENST00000578922 Q6ZNB5 142 aa20.52■□□□□ 0.88
SMG8-203ENST00000578922 BBS7Q8IWZ6 715 aa20.52■□□□□ 0.88
SMG8-203ENST00000578922 PPM1NQ8N819 430 aa20.52■□□□□ 0.88
SMG8-203ENST00000578922 GSDMBQ8TAX9 411 aa20.52■□□□□ 0.88
SMG8-203ENST00000578922 C10orf82Q8WW14 230 aa20.52■□□□□ 0.88
SMG8-203ENST00000578922 SLCO1B3Q9NPD5 702 aa20.52■□□□□ 0.88
SMG8-203ENST00000578922 SMYD2Q9NRG4 433 aa20.52■□□□□ 0.88
SMG8-203ENST00000578922 IL1RAPL1Q9NZN1 696 aa20.52■□□□□ 0.88
SMG8-203ENST00000578922 LSM7Q9UK45 103 aaKnown RBP20.52■□□□□ 0.88
SMG8-203ENST00000578922 L3MBTL1Q9Y468 752 aa20.52■□□□□ 0.88
SMG8-203ENST00000578922 PCDHA11Q9Y5I1 949 aa20.52■□□□□ 0.88
SMG8-203ENST00000578922 DENND4CQ5VZ89 1909 aa20.52■□□□□ 0.88
SMG8-203ENST00000578922 A0A1W2PPM1 405 aa20.52■□□□□ 0.88
SMG8-203ENST00000578922 ANXA9O76027 345 aa20.52■□□□□ 0.88
SMG8-203ENST00000578922 PTPN2P17706 415 aa20.52■□□□□ 0.88
SMG8-203ENST00000578922 CCNG1P51959 295 aa20.52■□□□□ 0.88
SMG8-203ENST00000578922 SLC7A9P82251 487 aa20.52■□□□□ 0.88
SMG8-203ENST00000578922 LBRQ14739 615 aaKnown RBP20.52■□□□□ 0.88
SMG8-203ENST00000578922 ACCSLQ4AC99 568 aa20.52■□□□□ 0.88
SMG8-203ENST00000578922 FSCBQ5H9T9 825 aa20.52■□□□□ 0.88
SMG8-203ENST00000578922 RNF219Q5W0B1 726 aaPredicted RBP20.52■□□□□ 0.88
SMG8-203ENST00000578922 PGBD5Q8N414 524 aa20.52■□□□□ 0.88
SMG8-203ENST00000578922 TBL1YQ9BQ87 522 aa20.52■□□□□ 0.88
SMG8-203ENST00000578922 MUC3BQ9H195 1237 aa20.52■□□□□ 0.88
SMG8-203ENST00000578922 MAGEH1Q9H213 219 aa20.52■□□□□ 0.88
SMG8-203ENST00000578922 BFARQ9NZS9 450 aa20.52■□□□□ 0.88
SMG8-203ENST00000578922 STOML2Q9UJZ1 356 aa20.52■□□□□ 0.88
SMG8-203ENST00000578922 TRIM33Q9UPN9 1127 aa20.52■□□□□ 0.88
SMG8-203ENST00000578922 HCFC2Q9Y5Z7 792 aa20.52■□□□□ 0.88
SMG8-203ENST00000578922 CCDC78A2IDD5 438 aa20.51■□□□□ 0.87
SMG8-203ENST00000578922 H0Y626 953 aa20.51■□□□□ 0.87
SMG8-203ENST00000578922 FAM155BO75949 473 aa20.51■□□□□ 0.87
SMG8-203ENST00000578922 HOXD9P28356 352 aaPredicted RBP20.51■□□□□ 0.87
SMG8-203ENST00000578922 CD86P42081 329 aa20.51■□□□□ 0.87
SMG8-203ENST00000578922 ERVK-21P61565 698 aa20.51■□□□□ 0.87
SMG8-203ENST00000578922 NIPAL4Q0D2K0 466 aa20.51■□□□□ 0.87
SMG8-203ENST00000578922 SEPT7Q16181 437 aaKnown RBP20.51■□□□□ 0.87
SMG8-203ENST00000578922 NAPEPLDQ6IQ20 393 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms