RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.44□□□□□ -0.58
CDK5RAP3-210ENST00000578733 C5orf60A6NFR6 353 aa11.44□□□□□ -0.58
CDK5RAP3-210ENST00000578733 C1QTNF3-AMACRE9PGA6 284 aa11.44□□□□□ -0.58
CDK5RAP3-210ENST00000578733 RNF103O00237 685 aa11.44□□□□□ -0.58
CDK5RAP3-210ENST00000578733 SMAD6O43541 496 aaKnown RBP11.44□□□□□ -0.58
CDK5RAP3-210ENST00000578733 OPHN1O60890 802 aa11.44□□□□□ -0.58
CDK5RAP3-210ENST00000578733 POP4O95707 220 aaKnown RBP11.44□□□□□ -0.58
CDK5RAP3-210ENST00000578733 PRNPP04156 253 aa11.44□□□□□ -0.58
CDK5RAP3-210ENST00000578733 HLA-EP13747 358 aa11.44□□□□□ -0.58
CDK5RAP3-210ENST00000578733 VAV1P15498 845 aa11.44□□□□□ -0.58
CDK5RAP3-210ENST00000578733 PRKCHP24723 683 aa11.44□□□□□ -0.58
CDK5RAP3-210ENST00000578733 PTPN3P26045 913 aa11.44□□□□□ -0.58
CDK5RAP3-210ENST00000578733 COILP38432 576 aaPredicted RBP11.44□□□□□ -0.58
CDK5RAP3-210ENST00000578733 WASP42768 502 aa11.44□□□□□ -0.58
CDK5RAP3-210ENST00000578733 CCR3P51677 355 aa11.44□□□□□ -0.58
CDK5RAP3-210ENST00000578733 AP1S1P61966 158 aa11.44□□□□□ -0.58
CDK5RAP3-210ENST00000578733 CCDC15Q0P6D6 951 aa11.44□□□□□ -0.58
CDK5RAP3-210ENST00000578733 CYTH1Q15438 398 aa11.44□□□□□ -0.58
CDK5RAP3-210ENST00000578733 OASLQ15646 514 aaKnown RBP11.44□□□□□ -0.58
CDK5RAP3-210ENST00000578733 CYP1B1Q16678 543 aa11.44□□□□□ -0.58
CDK5RAP3-210ENST00000578733 P3H1Q32P28 736 aa11.44□□□□□ -0.58
CDK5RAP3-210ENST00000578733 CFAP58Q5T655 872 aa11.44□□□□□ -0.58
CDK5RAP3-210ENST00000578733 EMC10Q5UCC4 262 aa11.44□□□□□ -0.58
CDK5RAP3-210ENST00000578733 FAM46CQ5VWP2 391 aa11.44□□□□□ -0.58
CDK5RAP3-210ENST00000578733 Q6ZVU0 165 aa11.44□□□□□ -0.58
CDK5RAP3-210ENST00000578733 PID1Q7Z2X4 250 aa11.44□□□□□ -0.58
CDK5RAP3-210ENST00000578733 ZNF572Q7Z3I7 529 aaPredicted RBP11.44□□□□□ -0.58
CDK5RAP3-210ENST00000578733 SFTPA1Q8IWL2 248 aa11.44□□□□□ -0.58
CDK5RAP3-210ENST00000578733 ZNF687Q8N1G0 1237 aa11.44□□□□□ -0.58
CDK5RAP3-210ENST00000578733 PRELID2Q8N945 189 aa11.44□□□□□ -0.58
CDK5RAP3-210ENST00000578733 MYO19Q96H55 970 aa11.44□□□□□ -0.58
CDK5RAP3-210ENST00000578733 PPP1R16AQ96I34 528 aa11.44□□□□□ -0.58
CDK5RAP3-210ENST00000578733 NUDCD1Q96RS6 583 aa11.44□□□□□ -0.58
CDK5RAP3-210ENST00000578733 TMEM121Q9BTD3 319 aa11.44□□□□□ -0.58
CDK5RAP3-210ENST00000578733 OSBPL1AQ9BXW6 950 aa11.44□□□□□ -0.58
CDK5RAP3-210ENST00000578733 TM6SF2Q9BZW4 377 aa11.44□□□□□ -0.58
CDK5RAP3-210ENST00000578733 ATP13A3Q9H7F0 1226 aa11.44□□□□□ -0.58
CDK5RAP3-210ENST00000578733 DYRK4Q9NR20 520 aa11.44□□□□□ -0.58
CDK5RAP3-210ENST00000578733 HECAQ9UBI9 543 aaPredicted RBP11.44□□□□□ -0.58
CDK5RAP3-210ENST00000578733 MTF2Q9Y483 593 aaPredicted RBP11.44□□□□□ -0.58
CDK5RAP3-210ENST00000578733 PLXND1Q9Y4D7 1925 aa11.44□□□□□ -0.58
CDK5RAP3-210ENST00000578733 SPTBN4Q9H254 2564 aa11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 A0A1W2PQ67 120 aa11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 CTAGE15A4D2H0 777 aa11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 K7ERQ8 282 aa11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 NDC80O14777 642 aa11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 GALR2O43603 387 aaPredicted RBP11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 SIN3BO75182 1162 aa11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 GCATO75600 419 aa11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 ECEL1O95672 775 aa11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 CD160O95971 181 aa11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 PEX11BO96011 259 aa11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 IFNB1P01574 187 aa11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 SERPINF2P08697 491 aa11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 CTAGE8P0CG41 777 aa11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 NFKBIAP25963 317 aa11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 SERPINA4P29622 427 aa11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 NBL1P41271 181 aa11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 SCNN1BP51168 640 aa11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 CCNHP51946 323 aaPredicted RBP11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 BCL2L1Q07817 233 aa11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 CAMK2GQ13555 558 aaPredicted RBP11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 DHX34Q14147 1143 aaKnown RBP11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 CRY1Q16526 586 aa11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 CWF19L1Q69YN2 538 aaKnown RBP11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 CCDC70Q6NSX1 233 aa11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 Q6ZS52 159 aa11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 SYDE1Q6ZW31 735 aaPredicted RBP11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 MAATS1Q7Z4T9 603 aa11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 SRLQ86TD4 932 aa11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 CTAGE6Q86UF2 777 aa11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 CTAGE4Q8IX94 777 aa11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 FAM71DQ8N9W8 422 aa11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 TSEN2Q8NCE0 465 aaKnown RBP11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 SPATA4Q8NEY3 305 aa11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 TSTD1Q8NFU3 115 aa11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 OR2T3Q8NH03 318 aa11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 FRS2Q8WU20 508 aa11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 PTPRN2Q92932 1015 aa11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 TEKT5Q96M29 485 aa11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 SPATA13Q96N96 652 aa11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 AGAP3Q96P47 875 aa11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 TUBGCP5Q96RT8 1024 aa11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 ACOX2Q99424 681 aa11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 MGME1Q9BQP7 344 aa11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 HEPHQ9BQS7 1158 aa11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 CPEB1Q9BZB8 566 aaKnown RBP11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 TNKS2Q9H2K2 1166 aa11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 ZDHHC6Q9H6R6 413 aa11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 ZDHHC4Q9NPG8 344 aa11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 SMARCAL1Q9NZC9 954 aa11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 PAK5Q9P286 719 aa11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 BCCIPQ9P287 314 aaKnown RBP eCLIP11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 LHX3Q9UBR4 397 aa11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 IL36AQ9UHA7 158 aa11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 RSPH14Q9UHP6 348 aa11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 ATP8A1Q9Y2Q0 1164 aa11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 MYO15AQ9UKN7 3530 aa11.43□□□□□ -0.58
CDK5RAP3-210ENST00000578733 TCRBV21S2A2A0A5A6 115 aa11.42□□□□□ -0.58
CDK5RAP3-210ENST00000578733 PRR23AA6NEV1 266 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms