RNA–Protein interactions for RNA: ENST00000578557.1

PPP4R1-210, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-210ENST00000578557 CTSOP43234 321 aaPredicted RBP8.72□□□□□ -1.01
PPP4R1-210ENST00000578557 SSR1P43307 286 aaKnown RBP8.72□□□□□ -1.01
PPP4R1-210ENST00000578557 NOP2P46087 812 aaKnown RBP8.72□□□□□ -1.01
PPP4R1-210ENST00000578557 ID4P47928 161 aa8.72□□□□□ -1.01
PPP4R1-210ENST00000578557 GRIA4P48058 902 aa8.72□□□□□ -1.01
PPP4R1-210ENST00000578557 RPIAP49247 311 aa8.72□□□□□ -1.01
PPP4R1-210ENST00000578557 NEK3P51956 506 aa8.72□□□□□ -1.01
PPP4R1-210ENST00000578557 SLC25A11Q02978 314 aaKnown RBP8.72□□□□□ -1.01
PPP4R1-210ENST00000578557 SPEM2Q0P670 501 aa8.72□□□□□ -1.01
PPP4R1-210ENST00000578557 KIF5AQ12840 1032 aa8.72□□□□□ -1.01
PPP4R1-210ENST00000578557 DPYSQ14117 519 aa8.72□□□□□ -1.01
PPP4R1-210ENST00000578557 PAFAH1B3Q15102 231 aaKnown RBP8.72□□□□□ -1.01
PPP4R1-210ENST00000578557 SETMARQ53H47 684 aaPredicted RBP8.72□□□□□ -1.01
PPP4R1-210ENST00000578557 ZNF805Q5CZA5 627 aa8.72□□□□□ -1.01
PPP4R1-210ENST00000578557 PPP6R3Q5H9R7 873 aaPredicted RBP8.72□□□□□ -1.01
PPP4R1-210ENST00000578557 ARTNQ5T4W7 220 aa8.72□□□□□ -1.01
PPP4R1-210ENST00000578557 TBC1D3GQ6DHY5 549 aa8.72□□□□□ -1.01
PPP4R1-210ENST00000578557 TBC1D3CQ6IPX1 549 aa8.72□□□□□ -1.01
PPP4R1-210ENST00000578557 KIAA1161Q6NSJ0 714 aa8.72□□□□□ -1.01
PPP4R1-210ENST00000578557 FBXL19Q6PCT2 694 aa8.72□□□□□ -1.01
PPP4R1-210ENST00000578557 LYPD8Q6UX82 237 aa8.72□□□□□ -1.01
PPP4R1-210ENST00000578557 ERN2Q76MJ5 926 aaKnown RBP8.72□□□□□ -1.01
PPP4R1-210ENST00000578557 CIR1Q86X95 450 aaPredicted RBP8.72□□□□□ -1.01
PPP4R1-210ENST00000578557 TMEFF1Q8IYR6 380 aa8.72□□□□□ -1.01
PPP4R1-210ENST00000578557 RCOR2Q8IZ40 523 aa8.72□□□□□ -1.01
PPP4R1-210ENST00000578557 TBC1D3Q8IZP1 549 aaPredicted RBP8.72□□□□□ -1.01
PPP4R1-210ENST00000578557 STK40Q8N2I9 435 aa8.72□□□□□ -1.01
PPP4R1-210ENST00000578557 RLN3Q8WXF3 142 aa8.72□□□□□ -1.01
PPP4R1-210ENST00000578557 IFT43Q96FT9 208 aa8.72□□□□□ -1.01
PPP4R1-210ENST00000578557 HSPA12BQ96MM6 686 aa8.72□□□□□ -1.01
PPP4R1-210ENST00000578557 TSGA13Q96PP4 275 aa8.72□□□□□ -1.01
PPP4R1-210ENST00000578557 LENG8Q96PV6 779 aaPredicted RBP8.72□□□□□ -1.01
PPP4R1-210ENST00000578557 CSPG4P5Q96PW8 444 aa8.72□□□□□ -1.01
PPP4R1-210ENST00000578557 PSKH2Q96QS6 385 aa8.72□□□□□ -1.01
PPP4R1-210ENST00000578557 SRPK1Q96SB4 655 aaKnown RBP8.72□□□□□ -1.01
PPP4R1-210ENST00000578557 GPR174Q9BXC1 333 aa8.72□□□□□ -1.01
PPP4R1-210ENST00000578557 TSGA10Q9BZW7 698 aa8.72□□□□□ -1.01
PPP4R1-210ENST00000578557 NEUROG2Q9H2A3 272 aa8.72□□□□□ -1.01
PPP4R1-210ENST00000578557 SLC32A1Q9H598 525 aa8.72□□□□□ -1.01
PPP4R1-210ENST00000578557 ATP13A3Q9H7F0 1226 aa8.72□□□□□ -1.01
PPP4R1-210ENST00000578557 ERVMER34-1Q9H9K5 563 aa8.72□□□□□ -1.01
PPP4R1-210ENST00000578557 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.72□□□□□ -1.01
PPP4R1-210ENST00000578557 CWC15Q9P013 229 aaKnown RBP8.72□□□□□ -1.01
PPP4R1-210ENST00000578557 HECAQ9UBI9 543 aaPredicted RBP8.72□□□□□ -1.01
PPP4R1-210ENST00000578557 NEU3Q9UQ49 428 aa8.72□□□□□ -1.01
PPP4R1-210ENST00000578557 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.72□□□□□ -1.01
PPP4R1-210ENST00000578557 PCDHGB2Q9Y5G2 931 aa8.72□□□□□ -1.01
PPP4R1-210ENST00000578557 PCDHA13Q9Y5I0 950 aa8.72□□□□□ -1.01
PPP4R1-210ENST00000578557 HS3ST3A1Q9Y663 406 aa8.72□□□□□ -1.01
PPP4R1-210ENST00000578557 CCDC66A2RUB6 948 aa8.71□□□□□ -1.02
PPP4R1-210ENST00000578557 TMEM110-MUSTN1A8MSY1 372 aa8.71□□□□□ -1.02
PPP4R1-210ENST00000578557 PRAMEF26H0Y7S4 382 aa8.71□□□□□ -1.02
PPP4R1-210ENST00000578557 DCLK1O15075 740 aa8.71□□□□□ -1.02
PPP4R1-210ENST00000578557 VILLO15195 856 aa8.71□□□□□ -1.02
PPP4R1-210ENST00000578557 MID1O15344 667 aa8.71□□□□□ -1.02
PPP4R1-210ENST00000578557 ZRANB2O95218 330 aaKnown RBP eCLIP8.71□□□□□ -1.02
PPP4R1-210ENST00000578557 GJB6O95452 261 aa8.71□□□□□ -1.02
PPP4R1-210ENST00000578557 CER1O95813 267 aa8.71□□□□□ -1.02
PPP4R1-210ENST00000578557 MT-CO1P00395 513 aa8.71□□□□□ -1.02
PPP4R1-210ENST00000578557 PAPOLAP51003 745 aaKnown RBP8.71□□□□□ -1.02
PPP4R1-210ENST00000578557 RHOAP61586 193 aa8.71□□□□□ -1.02
PPP4R1-210ENST00000578557 AP1S1P61966 158 aa8.71□□□□□ -1.02
PPP4R1-210ENST00000578557 RPS21P63220 83 aaKnown RBP8.71□□□□□ -1.02
PPP4R1-210ENST00000578557 ARF5P84085 180 aa8.71□□□□□ -1.02
PPP4R1-210ENST00000578557 ZNF252P-AS1Q0IIN9 211 aa8.71□□□□□ -1.02
PPP4R1-210ENST00000578557 STAT4Q14765 748 aa8.71□□□□□ -1.02
PPP4R1-210ENST00000578557 INAVAQ3KP66 663 aa8.71□□□□□ -1.02
PPP4R1-210ENST00000578557 TRIM61Q5EBN2 209 aa8.71□□□□□ -1.02
PPP4R1-210ENST00000578557 ZFYVE27Q5T4F4 411 aa8.71□□□□□ -1.02
PPP4R1-210ENST00000578557 MARC1Q5VT66 337 aa8.71□□□□□ -1.02
PPP4R1-210ENST00000578557 DCAF12L1Q5VU92 463 aa8.71□□□□□ -1.02
PPP4R1-210ENST00000578557 C11orf63Q6NUN7 778 aa8.71□□□□□ -1.02
PPP4R1-210ENST00000578557 GDPD4Q6W3E5 623 aa8.71□□□□□ -1.02
PPP4R1-210ENST00000578557 DPY19L3Q6ZPD9 716 aa8.71□□□□□ -1.02
PPP4R1-210ENST00000578557 LIAT1Q6ZQX7 453 aa8.71□□□□□ -1.02
PPP4R1-210ENST00000578557 KIAA2013Q8IYS2 634 aa8.71□□□□□ -1.02
PPP4R1-210ENST00000578557 PYROXD2Q8N2H3 581 aa8.71□□□□□ -1.02
PPP4R1-210ENST00000578557 MFSD2AQ8NA29 543 aa8.71□□□□□ -1.02
PPP4R1-210ENST00000578557 OR7D4Q8NG98 312 aa8.71□□□□□ -1.02
PPP4R1-210ENST00000578557 OR14C36Q8NHC7 312 aa8.71□□□□□ -1.02
PPP4R1-210ENST00000578557 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.71□□□□□ -1.02
PPP4R1-210ENST00000578557 TSC1Q92574 1164 aa8.71□□□□□ -1.02
PPP4R1-210ENST00000578557 FAF2Q96CS3 445 aa8.71□□□□□ -1.02
PPP4R1-210ENST00000578557 RBM41Q96IZ5 413 aaKnown RBP8.71□□□□□ -1.02
PPP4R1-210ENST00000578557 PPP1R2P1Q96PQ5 205 aa8.71□□□□□ -1.02
PPP4R1-210ENST00000578557 SP110Q9HB58 689 aa8.71□□□□□ -1.02
PPP4R1-210ENST00000578557 CAPN10Q9HC96 672 aa8.71□□□□□ -1.02
PPP4R1-210ENST00000578557 PCDH18Q9HCL0 1135 aa8.71□□□□□ -1.02
PPP4R1-210ENST00000578557 TMEM9BQ9NQ34 198 aa8.71□□□□□ -1.02
PPP4R1-210ENST00000578557 DNAAF2Q9NVR5 837 aaKnown RBP8.71□□□□□ -1.02
PPP4R1-210ENST00000578557 IPO11Q9UI26 975 aaKnown RBP8.71□□□□□ -1.02
PPP4R1-210ENST00000578557 CACNA1HO95180 2353 aa8.71□□□□□ -1.02
PPP4R1-210ENST00000578557 ANAPC1Q9H1A4 1944 aa8.7□□□□□ -1.02
PPP4R1-210ENST00000578557 A0A1W2PP55 124 aa8.7□□□□□ -1.02
PPP4R1-210ENST00000578557 MIF4GDA9UHW6 222 aaKnown RBP8.7□□□□□ -1.02
PPP4R1-210ENST00000578557 C10orf142B7Z368 130 aa8.7□□□□□ -1.02
PPP4R1-210ENST00000578557 KPNA3O00505 521 aaPredicted RBP8.7□□□□□ -1.02
PPP4R1-210ENST00000578557 PPP1R12AO14974 1030 aaPredicted RBP8.7□□□□□ -1.02
PPP4R1-210ENST00000578557 MATN3O15232 486 aa8.7□□□□□ -1.02
PPP4R1-210ENST00000578557 PJA2O43164 708 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms